New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 730045NA (NA)3 (0.030) 3/266 NT NA coding (463/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 730067 NA (NA)coding (485/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

GTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCT  >  NC_000913/729999‑730190
                                              |                                                                                                                                                 
gtgGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGgt                                             <  2:1189708/149‑1 (MQ=32)
gtgGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGgt                                             <  2:983946/149‑1 (MQ=32)
       gTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCg                                      >  2:64324/1‑149 (MQ=32)
        ggcgcGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGCCAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCgg                                     <  1:105859/148‑1 (MQ=17)
         gcgcGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCggg                                    <  2:1167520/149‑1 (MQ=32)
             ggcggcgTGGCGAAACTGGATGAAGGTCACCGTCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACACCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGCCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGcc                                <  1:1235505/149‑1 (MQ=12)
                      gCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGGGCGGGTGCCGGAAGCGGa                       >  2:1401790/1‑149 (MQ=17)
                       cGAAACTGGATGCCGGTCCCCCGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGCACTCCGCTTAAGTCCGCCTCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCGGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGAt                      <  1:858770/149‑1 (MQ=11)
                          aaCTGCATGAAGGGCTCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCCTCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCGGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAg                   <  2:95748/149‑1 (MQ=11)
                           actgtcagAAGGGCACCGGCTGGCCGCACACTTGCAGGCGCTGCCGGAAGAACTCCGCTTACGGCCGCATCCTTATCTGGCGACAAACAGTCCGCAGGGGCCGGGGGGGCTGCTCGGCTGGGGTGAGCGGGTGCCGGAAGCGGATGAgg                  <  2:376763/142‑1 (MQ=11)
                           aCTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGCACTCCGCTTAAGTCCGCATCGTTGTCTGGCGACCAACAGTCCGCAGGGGCCGTGGAGGATGCTAGTCTGGTTTGTGCGGGTGCCGTAGGCGGATGAgg                  >  1:1009486/1‑149 (MQ=11)
                              ggaggaAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGtgc               <  2:1219085/149‑1 (MQ=17)
                              ggATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGGCGGAAGCGGATGAGGtgc               >  2:245020/1‑149 (MQ=17)
                                   aaGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGctgcct          >  1:1421309/1‑149 (MQ=32)
                                    aGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGctgcctg         >  2:1109396/1‑149 (MQ=32)
                                     ggTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGCAAGAACTCCGCTTAACTCCGCAACGTTATCTGGCGACAAACACTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGACGTGctgcctgc        >  1:1149453/1‑149 (MQ=11)
                                      gTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTgcg       >  1:437764/1‑149 (MQ=32)
                                      gTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTgcg       >  2:683567/1‑149 (MQ=32)
                                        cACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGcgcc     >  2:80104/1‑149 (MQ=32)
                                         aCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGcgccg    >  2:357895/1‑149 (MQ=32)
                                           cGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCGGCTTAAGTCCGCATCGTTATCTGGCGACACACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGCGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCt  >  1:261407/1‑149 (MQ=12)
                                              |                                                                                                                                                 
GTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCT  >  NC_000913/729999‑730190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.