mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4496411 | 108 (1.060) | 3 (0.030) | 3/260 | NT | 2.8% | noncoding (7/85 nt) | leuX | tRNA‑Leu |
| ? | NC_000913 | = 4496478 | 108 (1.130) | noncoding (74/85 nt) | leuX | tRNA‑Leu | |||||
| * | ? | NC_000913 | 4304574 = | 88 (0.860) | 3 (0.030) | 3/278 | NT | 3.4% | intergenic (‑171/+38) | ytcA/yjcS | putative inner membrane efflux pump‑associated DUF1656 family protein/metallo‑beta‑lactamase superfamily protein |
| ? | NC_000913 | 4304604 = | 80 (0.780) | intergenic (‑201/+8) | ytcA/yjcS | putative inner membrane efflux pump‑associated DUF1656 family protein/metallo‑beta‑lactamase superfamily protein | |||||
| * | ? | NC_000913 | = 3873274 | 120 (1.180) | 3 (0.030) | 3/270 | NT | 2.5% | coding (339/618 nt) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| ? | NC_000913 | = 3873314 | 120 (1.210) | coding (299/618 nt) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase | |||||
| * | ? | NC_000913 | = 2604966 | 67 (0.660) | 3 (0.030) | 3/266 | NT | 4.2% | coding (156/1440 nt) | hyfD | hydrogenase 4, membrane subunit |
| ? | NC_000913 | = 2605020 | 72 (0.740) | coding (210/1440 nt) | hyfD | hydrogenase 4, membrane subunit | |||||
| * | ? | NC_000913 | = 288521 | 139 (1.360) | 3 (0.030) | 3/264 | NT | 2.2% | coding (642/759 nt) | yagI | CP4‑6 prophage; putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | = 288570 | 130 (1.340) | coding (593/759 nt) | yagI | CP4‑6 prophage; putative DNA‑binding transcriptional regulator | |||||
| * | ? | NC_000913 | 193444 = | 93 (0.910) | 3 (0.030) | 3/258 | NT | 3.6% | intergenic (+15/‑77) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase |
| ? | NC_000913 | 193489 = | 73 (0.770) | intergenic (+60/‑32) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase | |||||