New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4008067	48 (0.810)	3 (0.050)	3/262	NT	5.7%	coding (311/621 nt)	rhtC	threonine efflux pump
	?	NC_000913	= 4008090	54 (0.960)					coding (334/621 nt)	rhtC	threonine efflux pump

ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTT  >  NC_000913/4007919‑4008215                                                                                                                                                     |                                                                                                                                                     aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAAAGGCCTGGCTGCATACGCTGAATATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCGCTGAAAAAAGAGGCGGTTTCTTCACCTGCGCC                                                                                                                                                      >  1:238151‑M1/1‑149 (MQ=255)   tGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTTGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac                                                                                                                                                    <  1:880978/149‑1 (MQ=255)         gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCg                                                                                                                                              >  1:397078/1‑149 (MQ=255)                cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCCCAGGTCGAGCTGGc                                                                                                                                       >  2:302480/1‑149 (MQ=255)                     tttGATTATCGAAAAAATGGCCTGGCTGCCTACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGaaaa                                                                                                                                  <  1:82199/149‑1 (MQ=255)                     tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGaaaa                                                                                                                                  >  2:629595/1‑149 (MQ=255)                          ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGgg                                                                                                                             <  2:467107‑M2/149‑3 (MQ=255)                              cGAAAAAATGGCCTGGCTGCATGCGCTGATTATGGTGGGCGGTGGCATGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGAGCCACAGGTCGAGCTGGCGAAAAGTGggagca                                                                                                                         <  1:741539‑M2/149‑7 (MQ=255)                                aaaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTAGAGCTGGCGAAAAGTGGGCGCAGt                                                                                                                       >  1:811875/1‑149 (MQ=255)                                  aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGGATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCcacttttcgccagctcgacctgtggcgcaggtg                                                                                                                     <  2:33961‑M1/149‑34 (MQ=255)                                     aTGGCCTGGATGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATTCCACGTGGTGCACTGAAATAAGAGGCGGTTTCTGCACCTGCGCCACATGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCt                                                                                                                  <  2:474616/149‑1 (MQ=255)                                             gCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGtt                                                                                                          >  2:209487/1‑149 (MQ=255)                                                 aaTACGCTTATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCATATGCTACGTGGTGCACTGTAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACt                                                                                                      <  1:433528/148‑1 (MQ=255)                                                  aTACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCcacttttcgccagctcgacctgtggcgc                                                                                                                          >  1:368770‑M1/1‑100 (MQ=255)                                                  aTACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCcacttttcgccagctcgacctgtggcgc                                                                                                                          <  2:368770‑M1/128‑29 (MQ=255)                                                    aCGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGAc                                                                                                   >  2:1014822/1‑149 (MQ=255)                                                    aCGCTGATTATGGGGGGCGGTGGCCTGTAGCTCTGCTGGATGGCTTACCAGATGCTACGTGGTGCACTGAAACAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGAc                                                                                                   <  2:973727/149‑1 (MQ=255)                                                      gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCa                                                                                                 >  2:48274/1‑149 (MQ=255)                                                      gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAAGGGTTACCAGATGCTTCGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCa                                                                                                 >  2:390383/1‑149 (MQ=255)                                                      gCTGATTATGGTGGGCGGTGGCCTGGATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCa                                                                                                 >  1:210043/1‑149 (MQ=255)                                                           ttATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAAtctc                                                                                            >  1:499875/1‑149 (MQ=255)                                                           ttATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGATACCACATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGCCCAAtcac                                                                                            >  1:260288/1‑147 (MQ=255)                                                            tATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTTGGCGCAGTTTCCTGAAAGGGTTACTGACCAATCTCg                                                                                           >  2:1000192/1‑149 (MQ=255)                                                            actggtggGCGGTGGCCGGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTTCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCg                                                                                           <  1:160796/147‑1 (MQ=255)                                                                   ggccggggCCTGTAGCTCTGCTGGATGGGTTACCAGCTGCTCCGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATcc                                                                                    <  1:163114/143‑1 (MQ=255)                                                                      ggTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGaa                                                                                 >  2:42036/1‑149 (MQ=255)                                                                          gCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCg                                                                             <  2:11688/149‑1 (MQ=255)                                                                               tATCTCTGCTGGATGGGCTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTAt                                                                        <  2:793204/149‑1 (MQ=255)                                                                                aTCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATc                                                                       >  1:796290/1‑149 (MQ=255)                                                                                   tctGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCTGTTTCCTGAAAGGTTTACTGACAAATCTCGCTAATCCGAAAGCGATTATCtgc                                                                    >  2:220395/1‑147 (MQ=255)                                                                                   tctGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGGTTACTGACCAATCTCGCTAATCCGAAAGCGATTaggtac                                                                    >  2:227692/1‑144 (MQ=255)                                                                                   tctGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGAGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGATAGCGATTATCTAc                                                                    >  2:966122/1‑149 (MQ=255)                                                                                      gctgGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACttt                                                                 <  2:499875/149‑1 (MQ=255)                                                                                      gctgGATGGGTTACCAGATGCTACGTGGTGAACTGAAAATAGAGGCGGTTTCTGCACCTGCGCGACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACttt                                                                 <  2:260288/149‑1 (MQ=255)                                                                                        tgGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAACGCGAGTATCTACTTTgg                                                               >  1:222482/1‑149 (MQ=255)                                                                                          gATGGGTTACCAGATGCTACGTGGAGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCt                                                             <  1:237377/149‑1 (MQ=255)                                                                                              ggTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGgt                                                         <  1:467107/149‑1 (MQ=255)                                                                                                   ccAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTtct                                                    >  1:164522/1‑149 (MQ=255)                                                                                                    cAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTtctc                                                   >  2:368407/1‑149 (MQ=255)                                                                                                      gATGCTACGTGGTGGACTGAAAATAGAGGCGGGTTCTGCACCTGCGCCACAGGTCGTGCTGGCGAAAAGTGGTCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAt                                                 <  1:629595/149‑1 (MQ=255)                                                                                                         caaaCGTGCAGCAATGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGACGACCAGGCGAAAAGTGTGCGCATATTCCTGAAAGGTTTACTGAACAATCTCGCTAATCAGAAAGCGATTAACAACTTTGGCTCGGTTTTCTCAttat                                              >  2:629625/4‑147 (MQ=255)                                                                                                           tACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAATAGTGGGCTCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAttgttt                                            <  2:804622/149‑1 (MQ=255)                                                                                                             cGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAttgtttgt                                          >  1:982057/1‑149 (MQ=255)                                                                                                                 gttcACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCGACAGGTCGAGCTGGCGAAAAGTGTGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGt                                      <  1:88717/146‑1 (MQ=255)                                                                                                                   gCACTGAAAAAAGAGGGGGTTTCTGCAGCTGCGCGAGAGGTCGAGATGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACGAATCTCGCTAATCCGAAAGCGATTATGTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGa                                    <  1:817005/149‑1 (MQ=255)                                                                                                                       tGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGAGCAATCTCGCTAATACGAAAGCGATTATCTACTTTGGCTCGG‑GTTCTCATTGTTTGTCGGTGATAACg                               >  2:45576/1‑149 (MQ=255)                                                                                                                       tGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGGTATCATTGTTTGTAGGTGATaag                                >  2:758576/1‑148 (MQ=255)                                                                                                                            aaaGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTgg                           <  2:29285/149‑1 (MQ=255)                                                                                                                              agagGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTGGTCATTGTTTGTGGGTGATTACGTTGGcc                         >  1:126600/1‑148 (MQ=255)                                                                                                                                         cTGCACCTGCGCCACAGGGCGAGCTGGCGAAAAGGTGGCGCAGTTTCCTGAAAGGTTTACTGACGAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCgcgcgc              <  1:629625/149‑1 (MQ=255)                                                                                                                                           gCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTg            <  1:302480/149‑1 (MQ=255)                                                                                                                                            cACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatccaggccaccgcccaccataatcagcgtatgcagccaggccatttt           <  2:33961‑M2/149‑117 (MQ=255)                                                                                                                                             aCCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAATGCGATTATCTACTTTGGCTCGGTGGTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTggg          >  2:437289/1‑149 (MQ=255)                                                                                                                                             aCCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTggg          <  2:397078/149‑1 (MQ=255)                                                                                                                                              ccTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCATGAAAAGATTAAGGAGCAATCTAACTTATAATAAAGCTATTATATACTGTGGAACCGTGTTATCATTTTAAGAATGTGATAAAGTTGGCACTACCGCGGGCGgggg         >  2:50512/1‑149 (MQ=255)                                                                                                                                                tGCTCCcacttttcgccagctcgacctgtggctcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatacatgccaccgcccaccataatcagcgcatgcagccaggccattttttcg       <  1:741539‑M1/149‑144 (MQ=255)                                                                                                                                                tGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGCCCAATCTCGCTAATCCGAAAGCGATTATCGAGTTGGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGGTggggga       >  1:875773/1‑147 (MQ=255)                                                                                                                                                 gcgcCACAGGTCGAGCTGGCGAAAAGTGggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatacaggccaccgcccaccataatcagcgtat                           <  2:368770‑M2/128‑101 (MQ=255)                                                                                                                                                 gcgcCACAGGTCGAGCTGGCGAAAAGTGggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatacaggccaccgcccaccataatcagcgtat                           >  1:368770‑M2/1‑28 (MQ=255)                                                                                                                                                    cccacttttcgccagctcgacctgtggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatacaggccaccgcccaccataatcagcgtatgcagccaggccattttttcgataa   <  2:467107‑M1/149‑148 (MQ=255)                                                                                                                                                     cacaGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCAttttt  <  2:210043/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTT  >  NC_000913/4007919‑4008215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.