New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4008067	48 (0.810)	3 (0.050)	3/262	NT	5.7%	coding (311/621 nt)	rhtC	threonine efflux pump
	?	NC_000913	= 4008090	54 (0.960)					coding (334/621 nt)	rhtC	threonine efflux pump

TTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTGTCGAAACGCT  >  NC_000913/4007944‑4008238                                                                                                                                                   |                                                                                                                                                     ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGgg                                                                                                                                                    <  2:467107‑M2/149‑3 (MQ=255)     cGAAAAAATGGCCTGGCTGCATGCGCTGATTATGGTGGGCGGTGGCATGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGAGCCACAGGTCGAGCTGGCGAAAAGTGggagca                                                                                                                                                <  1:741539‑M2/149‑7 (MQ=255)       aaaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTAGAGCTGGCGAAAAGTGGGCGCAGt                                                                                                                                              >  1:811875/1‑149 (MQ=255)            aTGGCCTGGATGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATTCCACGTGGTGCACTGAAATAAGAGGCGGTTTCTGCACCTGCGCCACATGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCt                                                                                                                                         <  2:474616/149‑1 (MQ=255)                    gCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGtt                                                                                                                                 >  2:209487/1‑149 (MQ=255)                        aaTACGCTTATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCATATGCTACGTGGTGCACTGTAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACt                                                                                                                             <  1:433528/148‑1 (MQ=255)                           aCGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGAc                                                                                                                          >  2:1014822/1‑149 (MQ=255)                           aCGCTGATTATGGGGGGCGGTGGCCTGTAGCTCTGCTGGATGGCTTACCAGATGCTACGTGGTGCACTGAAACAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGAc                                                                                                                          <  2:973727/149‑1 (MQ=255)                             gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCa                                                                                                                        >  2:48274/1‑149 (MQ=255)                             gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAAGGGTTACCAGATGCTTCGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCa                                                                                                                        >  2:390383/1‑149 (MQ=255)                             gCTGATTATGGTGGGCGGTGGCCTGGATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCa                                                                                                                        >  1:210043/1‑149 (MQ=255)                                  ttATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAAtctc                                                                                                                   >  1:499875/1‑149 (MQ=255)                                  ttATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGATACCACATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGCCCAAtcac                                                                                                                   >  1:260288/1‑147 (MQ=255)                                   tATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTTGGCGCAGTTTCCTGAAAGGGTTACTGACCAATCTCg                                                                                                                  >  2:1000192/1‑149 (MQ=255)                                   actggtggGCGGTGGCCGGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTTCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCg                                                                                                                  <  1:160796/147‑1 (MQ=255)                                          ggccggggCCTGTAGCTCTGCTGGATGGGTTACCAGCTGCTCCGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATcc                                                                                                           <  1:163114/143‑1 (MQ=255)                                             ggTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGaa                                                                                                        >  2:42036/1‑149 (MQ=255)                                                 gCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCg                                                                                                    <  2:11688/149‑1 (MQ=255)                                                      tATCTCTGCTGGATGGGCTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTAt                                                                                               <  2:793204/149‑1 (MQ=255)                                                       aTCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATc                                                                                              >  1:796290/1‑149 (MQ=255)                                                          tctGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCTGTTTCCTGAAAGGTTTACTGACAAATCTCGCTAATCCGAAAGCGATTATCtgc                                                                                           >  2:220395/1‑147 (MQ=255)                                                          tctGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGGTTACTGACCAATCTCGCTAATCCGAAAGCGATTaggtac                                                                                           >  2:227692/1‑144 (MQ=255)                                                          tctGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGAGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGATAGCGATTATCTAc                                                                                           >  2:966122/1‑149 (MQ=255)                                                             gctgGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACttt                                                                                        <  2:499875/149‑1 (MQ=255)                                                             gctgGATGGGTTACCAGATGCTACGTGGTGAACTGAAAATAGAGGCGGTTTCTGCACCTGCGCGACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACttt                                                                                        <  2:260288/149‑1 (MQ=255)                                                               tgGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAACGCGAGTATCTACTTTgg                                                                                      >  1:222482/1‑149 (MQ=255)                                                                 gATGGGTTACCAGATGCTACGTGGAGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCt                                                                                    <  1:237377/149‑1 (MQ=255)                                                                     ggTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGgt                                                                                <  1:467107/149‑1 (MQ=255)                                                                          ccAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTtct                                                                           >  1:164522/1‑149 (MQ=255)                                                                           cAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTtctc                                                                          >  2:368407/1‑149 (MQ=255)                                                                             gATGCTACGTGGTGGACTGAAAATAGAGGCGGGTTCTGCACCTGCGCCACAGGTCGTGCTGGCGAAAAGTGGTCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAt                                                                        <  1:629595/149‑1 (MQ=255)                                                                                caaaCGTGCAGCAATGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGACGACCAGGCGAAAAGTGTGCGCATATTCCTGAAAGGTTTACTGAACAATCTCGCTAATCAGAAAGCGATTAACAACTTTGGCTCGGTTTTCTCAttat                                                                     >  2:629625/4‑147 (MQ=255)                                                                                  tACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAATAGTGGGCTCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAttgttt                                                                   <  2:804622/149‑1 (MQ=255)                                                                                    cGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAttgtttgt                                                                 >  1:982057/1‑149 (MQ=255)                                                                                        gttcACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCGACAGGTCGAGCTGGCGAAAAGTGTGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGt                                                             <  1:88717/146‑1 (MQ=255)                                                                                          gCACTGAAAAAAGAGGGGGTTTCTGCAGCTGCGCGAGAGGTCGAGATGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACGAATCTCGCTAATCCGAAAGCGATTATGTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGa                                                           <  1:817005/149‑1 (MQ=255)                                                                                              tGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGAGCAATCTCGCTAATACGAAAGCGATTATCTACTTTGGCTCGG‑GTTCTCATTGTTTGTCGGTGATAACg                                                      >  2:45576/1‑149 (MQ=255)                                                                                              tGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGGTATCATTGTTTGTAGGTGATaag                                                       >  2:758576/1‑148 (MQ=255)                                                                                                   aaaGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTgg                                                  <  2:29285/149‑1 (MQ=255)                                                                                                     agagGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTGGTCATTGTTTGTGGGTGATTACGTTGGcc                                                >  1:126600/1‑148 (MQ=255)                                                                                                                cTGCACCTGCGCCACAGGGCGAGCTGGCGAAAAGGTGGCGCAGTTTCCTGAAAGGTTTACTGACGAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCgcgcgc                                     <  1:629625/149‑1 (MQ=255)                                                                                                                  gCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTg                                   <  1:302480/149‑1 (MQ=255)                                                                                                                   cACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatccaggccaccgcccaccataatcagcgtatgcagccaggccatttt                                  <  2:33961‑M2/149‑117 (MQ=255)                                                                                                                    aCCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAATGCGATTATCTACTTTGGCTCGGTGGTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTggg                                 >  2:437289/1‑149 (MQ=255)                                                                                                                    aCCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTggg                                 <  2:397078/149‑1 (MQ=255)                                                                                                                     ccTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCATGAAAAGATTAAGGAGCAATCTAACTTATAATAAAGCTATTATATACTGTGGAACCGTGTTATCATTTTAAGAATGTGATAAAGTTGGCACTACCGCGGGCGgggg                                >  2:50512/1‑149 (MQ=255)                                                                                                                       tGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGCCCAATCTCGCTAATCCGAAAGCGATTATCGAGTTGGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGGTggggga                              >  1:875773/1‑147 (MQ=255)                                                                                                                        gcgcCACAGGTCGAGCTGGCGAAAAGTGggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatacaggccaccgcccaccataatcagcgtat                                                  <  2:368770‑M2/128‑101 (MQ=255)                                                                                                                        gcgcCACAGGTCGAGCTGGCGAAAAGTGggcgcaggtgcagaaaccgcctcttttttcagtgcaccacgtagcatctggtaacccatccagcagagatacaggccaccgcccaccataatcagcgtat                                                  >  1:368770‑M2/1‑28 (MQ=255)                                                                                                                            cacaGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCAttttt                         <  2:210043/149‑1 (MQ=255)                                                                                                                             acaGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCGGCAAGGGGGACTGCCCCATCTCGCTATTCCGAAAGCGATGATCTACTTTGGCTCGGGGGTCTCATGGTTGGTCGGGGATAACGTTGGCCCGACCGCGCGCTGGGGCAtgttgg                        >  2:888556/1‑147 (MQ=255)                                                                                                                              caGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGGTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTgc                       <  1:42036/149‑1 (MQ=255)                                                                                                                                ggTCGCGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGGTCTCATTGTTTGTCTGTGATAACGTTGGCAATACCTCGCGCTGGGGCATTTTTtcgc                     >  1:562109/1‑149 (MQ=255)                                                                                                                                ggTCGAGCTTGCGAAAAGTGGGGGCAGTTTCCTGACAGGTTTACTGCCCAAGCTCGCTACTCCGAACGCGATTTTCTACTTTGTCTAGGGGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCGGGGGCATTTTTgcgc                     <  2:238151/149‑1 (MQ=255)                                                                                                                                 gTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGCCCAATCTCGCTAAGCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCAGTGTTTGTAGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCt                    >  1:684649/1‑149 (MQ=255)                                                                                                                                    gAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGAt                 <  1:1014822/149‑1 (MQ=255)                                                                                                                                    gAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACATTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCAGTTTTGCGCTGAt                 <  1:758576/149‑1 (MQ=255)                                                                                                                                          gCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTGTCATTGTTTGTCGGTGATTACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTgg           >  2:619448/1‑148 (MQ=255)                                                                                                                                            gAAAAGTGGGCGCAGTTTCCTGAAATGTTTACTGACAAATCTCGCTAATCCGATAGCGATTATCTACTTTGGCTCGGTGTTCTCAGTGTGTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGTCATATTTGCGGTGAGCATTGTCg         >  2:464849/1‑149 (MQ=255)                                                                                                                                            gAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTGTCg         <  2:796290/149‑1 (MQ=255)                                                                                                                                                   gggCGCAGTTTCCTGACAGGTTTACAGACCACTCTCGCAAATCCGAAAGCGATTATCTACTTTGGCTCGGTTATCTCATTGTTTGTCGGGGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTGTCGAAACGCt  <  2:811875/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTGTCGAAACGCT  >  NC_000913/4007944‑4008238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.