New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781016	53 (0.520)	3 (0.030)	3/220	NT	5.7%	intergenic (+98/‑52)	lysW/valZ	tRNA‑Lys/tRNA‑Val
	?	NC_000913	781653 =	53 (0.610)					intergenic (+1/‑432)	lysQ/nadA	tRNA‑Lys/quinolinate synthase, subunit A

GAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTC  >  NC_000913/781521‑781790                                                                                                                                     |                                                                                                                                          ttggtcgcaggttcgaatcctgcacgacccaccagttttaacatcgaagacagatgttaagcgtgtaggataacgttgcgtcagcaacggcccgaagggcgagcgaagcgagtcatcctgcacgacccaccaATGTaaaa                                                                                                                                    >  1:99832‑M2/133‑140 (MQ=255)       tCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGATGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcgc                                                                                                                              >  2:1453990/1‑140 (MQ=255)                 ccgaccaTCCTGACTGATTAAGGCAGCATAATCCCGCACGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGTCTTTTACTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTACAGgcg                                                                                                                    <  2:1109477/137‑1 (MQ=17)                 cccACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcg                                                                                                                    >  2:1122201/1‑140 (MQ=255)                    accaTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtt                                                                                                                 >  2:906000/1‑140 (MQ=255)                    accaTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCATGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtt                                                                                                                 >  2:1817023/1‑140 (MQ=255)                     tgcacgacccaccagttttaacatcgaagacagatgttaagcgtgtaggataacgttgcgtcagcaacggcccgtagggcgagcgaagcgagtcatcctgcacgacccaccaATGTAAAAAAGCGCCCTAAAGGCGCttt                                                                                                                >  1:725947‑M2/113‑140 (MQ=255)                         cgacccccaagtttaaacatcgaagacagctgttaagcgtgtaggataacgttgcgtccgcaacggcccgaagggcgagcgaagcgagtcatcctgcacgacccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTg                                                                                                            <  2:99832‑M2/32‑1 (MQ=255)                         ccTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTg                                                                                                            >  2:93176/1‑140 (MQ=255)                         ccTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTg                                                                                                            >  2:926513/1‑140 (MQ=255)                         ccTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTg                                                                                                            >  2:1366974/1‑140 (MQ=255)                           tGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCt                                                                                                          >  2:145902/1‑140 (MQ=255)                             aaTGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAt                                                                                                        >  1:1238844/1‑140 (MQ=255)                                  ttAAGGCAGCATAATCCCGCATGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCg                                                                                                   <  1:1366988/140‑1 (MQ=255)                                  ttAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCg                                                                                                   >  2:972227/1‑140 (MQ=255)                                  ttAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCg                                                                                                   <  1:269231/140‑1 (MQ=255)                                  ttAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCg                                                                                                   >  2:1309656/1‑140 (MQ=255)                                  ttAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCg                                                                                                   >  2:749552/1‑140 (MQ=255)                                  ttAAGGCAGCACACCCCCGAAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCg                                                                                                   <  1:1368670/140‑1 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAcgccaa                                                                                          >  2:1118236/1‑135 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTCTCTGCGAAACACaaa                                                                                          >  2:1117979/1‑140 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa                                                                                          >  1:369217/1‑140 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa                                                                                          >  1:1602901/1‑140 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa                                                                                          >  1:1605351/1‑140 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa                                                                                          >  1:1605406/1‑140 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa                                                                                          >  1:1605434/1‑140 (MQ=255)                                           caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCaaa                                                                                          >  2:406739/1‑140 (MQ=255)                                                  ccGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGa                                                                                   <  2:956422/140‑1 (MQ=38)                                                   cgaaaGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGaa                                                                                  <  2:520523/137‑1 (MQ=21)                                                   cGCCAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTCAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGaa                                                                                  <  2:340027/140‑1 (MQ=21)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:1815762/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:1871338/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:928111/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:854765/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:760514/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  2:329060/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:760203/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:759908/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  2:1923986/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  1:759309/1‑140 (MQ=35)                                                     cAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAcc                                                                                >  2:1872900/1‑140 (MQ=35)                                                          ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAATGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcag                                                                           <  2:1639793/140‑1 (MQ=17)                                                          ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcag                                                                           >  1:616739/1‑140 (MQ=32)                                                            tCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCACTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagca                                                                         <  2:466830/140‑1 (MQ=17)                                                            tCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagca                                                                         >  2:345751/1‑140 (MQ=32)                                                                   cTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAATGGCGCTTTTTTGATATGGGCGATTCTAGAAGATGCGATGCTGAAGCTGGTttga                                                                  >  2:1433787/1‑140 (MQ=11)                                                                        ttGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagttga                                                             >  2:548728/1‑140 (MQ=32)                                                                        ttGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCAGCGAATCACCAAGATACGAAACTGCACCTGGTttgagatga                                                             >  2:1171624/1‑140 (MQ=11)                                                                           gaagagCAGTTGACTTTTAATCAATAGGTCGCAGCAACTAATCCAGCACGACCCACCAATGTAAAAAAGCGCCCTAAACGCGCATTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcg                                                          <  2:577055/138‑1 (MQ=11)                                                                           gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAACTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgcg                                                          <  2:787120/140‑1 (MQ=17)                                                                                      gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaa                                               >  1:1207430/1‑140 (MQ=32)                                                                                      gACTTTTAATCAATTGGTCGAAGGTTCTAATCCTGCACGACCCACCAATTTAAAAAAGCGCCCTAAAGGCGATTTTTTGCTATCTGCTATACTCAATGATTCTAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaa                                               <  1:1535820/140‑1 (MQ=11)                                                                                           ttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg                                          <  2:854765/140‑1 (MQ=32)                                                                                                   ttGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc                                  >  2:29996/1‑140 (MQ=32)                                                                                                         gCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc                            <  2:67275/140‑1 (MQ=32)                                                                                                         gCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc                            <  1:906000/140‑1 (MQ=32)                                                                                                                            gACCAACCAATTTAAAAATGCCCCCTACAGGCGCTTTTTTGCTATCTTCTATAATAAAAGATTCGAACGTGATGAAGTTTTGTGTGGAGCGCTGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaa         <  1:77230/140‑1 (MQ=11)                                                                                                                              cccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGagcgaagc       >  2:1021259‑M2/8‑140 (MQ=255)                                                                                                                                 accaTTGTAAAAAACCGCCCCCAAGCCGGTTTTTTGCTAACTGCGAGACTCACCGATACGAACCTGCCTCATGGAGGCGTGGAGCGCAGCGACACAACGGAGGCGCTGGCTGCGACGGCCCGAAGGGCGAGCGAAGCGAg    <  2:1725230/140‑1 (MQ=2)                                                                                                                                 accaATTTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATCTGCTATACTCAAAGATTCTACCCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGATCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAg    <  1:749552‑M2/136‑1 (MQ=255)                                                                                                                                  ccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCTGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGt   <  1:619889‑M2/137‑1 (MQ=255)                                                                                                                                   caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTGTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTc  >  1:936492‑M2/3‑140 (MQ=255)                                                                                                                                   caATGTAAAAAAGAGCCCTAAAGGCGCTTTTGTGCTATCTGCGATACTCAATGATTCGAACCTGCAGCAGGGTTGAGTTGAGCGCAGCGAAACTACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTc  >  1:1613677‑M2/3‑140 (MQ=255)                                                                                                                                     |                                                                                                                                          GAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTC  >  NC_000913/781521‑781790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.