mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 129 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4615036 | 456 (1.330) | 6 (0.020) | 3/266 | NT | 1.4% | coding (508/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | = 4615110 | 397 (1.210) | coding (434/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | = 4600783 | 379 (1.100) | 7 (0.020) | 3/266 | NT | 1.8% | coding (193/738 nt) | dnaC | DNA biosynthesis protein |
| ? | NC_000913 | = 4600813 | 390 (1.190) | coding (163/738 nt) | dnaC | DNA biosynthesis protein | |||||
| * | ? | NC_000913 | = 4583137 | 289 (0.840) | 5 (0.020) | 3/266 | NT | 1.8% | intergenic (‑89/+112) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583224 | 280 (0.850) | intergenic (‑176/+25) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4583130 | 291 (0.850) | 6 (0.020) | 3/272 | NT | 2.1% | intergenic (‑82/+119) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583231 | 281 (0.840) | intergenic (‑183/+18) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4542690 | 277 (0.810) | 8 (0.020) | 6/260 | NT | 2.7% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 317 (0.990) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4534139 | 330 (0.960) | 11 (0.030) | 4/258 | NT | 3.3% | intergenic (‑86/+291) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment |
| ? | NC_000913 | = 4534160 | 333 (1.050) | intergenic (‑107/+270) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment | |||||
| * | ? | NC_000913 | 4524790 = | 399 (1.160) | 4 (0.010) | 3/258 | NT | 1.1% | coding (221/906 nt) | yjhH | putative lyase/synthase |
| ? | NC_000913 | 4524835 = | 326 (1.020) | coding (176/906 nt) | yjhH | putative lyase/synthase | |||||
| * | ? | NC_000913 | 4384353 = | 337 (0.980) | 4 (0.010) | 3/268 | NT | 1.2% | coding (515/1503 nt) | yjeM | putative transporter |
| ? | NC_000913 | 4384380 = | 332 (1.000) | coding (542/1503 nt) | yjeM | putative transporter | |||||
| * | ? | NC_000913 | = 4298625 | 337 (0.980) | 3 (0.010) | 3/262 | NT | 0.90% | coding (742/2148 nt) | fdhF | formate dehydrogenase‑H, selenopolypeptide subunit |
| ? | NC_000913 | = 4298645 | 346 (1.070) | coding (722/2148 nt) | fdhF | formate dehydrogenase‑H, selenopolypeptide subunit | |||||
| * | ? | NC_000913 | 4263211 = | 345 (1.010) | 6 (0.020) | 3/262 | NT | 1.9% | intergenic (+129/+37) | pspG/qorA | phage shock protein G/quinone oxidoreductase, NADPH‑dependent |
| ? | NC_000913 | 4263250 = | 300 (0.930) | coding (982/984 nt) | qorA | quinone oxidoreductase, NADPH‑dependent | |||||