| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 781369 = | 43 (0.630) | 15 (0.220) +GAG |
6/270 | NT | 35.0% | noncoding (1/76 nt) | lysZ | tRNA‑Lys |
| ? | NC_000913 | = 2521006 | 14 (0.200) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
GAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTT > NC_000913/2520859‑2521149 | gaacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa < 2:986690/149‑1 (MQ=255)gaacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa < 1:632234/149‑1 (MQ=255)caacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGTAGAGCACCTCACTTACAAGGAGTGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa < 2:788584/148‑1 (MQ=255) gaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAactac > 1:917313/1‑149 (MQ=255) aacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCaacaacgaaa > 1:586132/1‑145 (MQ=255) acAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAcatactg < 1:571533‑M2/149‑8 (MQ=255) aGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGtctc < 2:983967/149‑1 (MQ=255) actgcGTTGATTCATTTTGAACTCTCCCTTTAATCCGAGTCCTCACCTCGGGGGTGATTAGCGCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActtcgggtcgttagctcagttg > 1:782337‑M2/3‑127 (MQ=255) gTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCACCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTGATGTAGTCTAAGCAGTGTa > 2:460640/1‑149 (MQ=25) ttGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAg < 1:452783/149‑1 (MQ=255) tCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActtcgggtcgttagctcagttggtagagcagtt < 2:487923‑M2/149‑34 (MQ=255) aTTTTGAACTCTCCCTATAATGCGACTCCACACAGCTGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGGCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTAATGTAGTCTCCGCCGTGTAGCAAGaaa < 1:1078288/149‑1 (MQ=255) ttGAACTCTCCCTATAATGCGACTCCACACTGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTAGGAGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTg < 1:800876/149‑1 (MQ=255) ctcCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTg < 1:43515/149‑1 (MQ=255) ataATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGAt < 1:744361/149‑1 (MQ=255) cgccTCCCCACAGCGGGCGTGAGTAGCTCTCCTGGGAGAGCACCTCCCTTTCAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCATCTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTc < 2:652482/146‑1 (MQ=25) acacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActtcgggtcgt > 2:512802‑M2/1‑85 (MQ=255) acacaGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActtcgggtcgt < 1:512802‑M2/96‑12 (MQ=255) gggTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCAGTCATCACCCACCActcgggtagttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttagaatcctgcacgac < 1:448390‑M2/149‑74 (MQ=255) ggTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGGCATCACCCACAActcgggtcgttagctcagttggtagatcagttgacttttaatcaattgttcgcagtttcgaatcctgcacgacc < 2:912219‑M2/149‑75 (MQ=255) gATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccac > 2:829332‑M2/1‑72 (MQ=255) ttAGCTCAGCTGGGAGAGCACCTCCCTTTCAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccagca < 1:687076‑M2/149‑80 (MQ=255) agagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGCGCACCTcc > 2:1069716/1‑131 (MQ=255) agagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTcc < 1:1069716/131‑1 (MQ=255) ccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggtt < 2:128628‑M2/104‑59 (MQ=255) ccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggtt > 1:128628‑M2/1‑46 (MQ=255) aaGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaagttggttagtggttgataacgtg < 2:601234‑M2/149‑110 (MQ=255) tCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcct < 1:1091121‑M2/96‑67 (MQ=255) tCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcct > 2:1091121‑M2/1‑30 (MQ=255) ccGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtc > 2:807426‑M2/1‑16 (MQ=255) ccGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtc < 1:807426‑M2/67‑52 (MQ=255) cGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTGACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATAACCCACGACTTTCTCGGCAGCt > 2:914950/1‑149 (MQ=255) tcatcaCCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTg < 2:994810/75‑1 (MQ=255) tcatcaCCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTg > 1:994810/1‑75 (MQ=255) ccacgaTCTACTTTATGTAGTCTCCGCCGTGAAGCCAGAACTTGAGCAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCtt < 2:440209/149‑1 (MQ=21) | GAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTT > NC_000913/2520859‑2521149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |