New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120186766 (0.960)4 (0.060) 3/266 NT 5.7% coding (218/309 nt) ymfJ e14 prophage; uncharacterized protein
?NC_000913 = 1201905 69 (1.050)coding (180/309 nt) ymfJ e14 prophage; uncharacterized protein

CTTCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGCAACAATG  >  NC_000913/1201761‑1202053
                                                                                                                                                 |                                                                                                                                                    
cTTCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTgtgt                                                                                                                                                  >  2:463324‑M2/1‑145 (MQ=255)
 ttCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTgtgtt                                                                                                                                                 <  2:925119‑M2/149‑6 (MQ=255)
  tCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGGCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTa                                                                                                                                                <  2:382899/149‑1 (MQ=255)
   ccGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAg                                                                                                                                               >  1:305807/1‑149 (MQ=255)
   ccGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATCCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAg                                                                                                                                               <  1:572788/149‑1 (MQ=255)
    cGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGc                                                                                                                                              <  1:1176570/149‑1 (MQ=255)
      tCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGGGAGTGTGTTAGCCa                                                                                                                                            <  2:632043/149‑1 (MQ=255)
         gCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCACAGCGGTGAGTGTGTTAGCCATGa                                                                                                                                         >  1:553741/1‑149 (MQ=255)
          cTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGaa                                                                                                                                        <  1:540186/149‑1 (MQ=255)
              cTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTc                                                                                                                                    >  2:464115/1‑149 (MQ=255)
               ttAGTTTGTAACGATTTCGTTCATTACGATCATACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGGGATCAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGGGAGTGTGTTAGCCATGAAATTCa                                                                                                                                   <  1:1178240/149‑1 (MQ=255)
               ttAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCa                                                                                                                                   <  2:787479/149‑1 (MQ=255)
                tAGTTGGTAACGATTTCGTTCATTACGATCTTAAGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGTCTCAACTTCTCTCCATTGCATGGCATAGGGGTGAGTGTGTTAGCCATGAAATTCAt                                                                                                                                  <  2:534121/149‑1 (MQ=255)
                      gTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTc                                                                                                                            >  2:856605/1‑149 (MQ=255)
                       tAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTATCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCg                                                                                                                           >  1:666984/1‑149 (MQ=255)
                       gaaCGATTTCGTGCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCg                                                                                                                           <  2:1002199/148‑1 (MQ=255)
                           gATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTc                                                                                                                       >  1:607910/1‑149 (MQ=255)
                             tttCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGa                                                                                                                     >  2:247233/1‑149 (MQ=255)
                                cGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGAccc                                                                                                                  >  2:296183/1‑148 (MQ=255)
                                    cATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAgggg                                                                                                              >  1:5909/1‑149 (MQ=255)
                                     aTTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGc                                                                                                             >  1:31250/1‑149 (MQ=255)
                                     aTTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTAACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGc                                                                                                             >  2:1180368/1‑149 (MQ=255)
                                       tACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAAACATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCtt                                                                                                           >  2:998498/1‑149 (MQ=255)
                                          gATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTgcg                                                                                                        >  1:115698/1‑149 (MQ=255)
                                                  gCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTTCGCCCCGaaa                                                                                                >  2:388000/1‑149 (MQ=255)
                                                  gCCTAAGACCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGGGATAATCACGGCTCCCATTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGGTAGCCATTAACTGCATGAGGTCGGTTCGCGCAGGGGCTTGCGCCGCGGaa                                                                                                >  2:1008286/1‑149 (MQ=255)
                                                     tAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTc                                                                                             >  2:727268/1‑149 (MQ=255)
                                                     tAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTACATTGCATGGCAGAGGGGTGAGTGTGTTATCCATGAAATTCATGAACTCGGTTCGACCCGGGGCTTGCGCCCCGCAAGTc                                                                                             >  1:506184/1‑149 (MQ=255)
                                                          ccctCAATCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTaa                                                                                        <  2:896582/146‑1 (MQ=255)
                                                          ccATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAATACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCGGGCAATTCATGACCTCGGTTCGACCATGGGCTTGCGCCCCGCAAGTCTTTaa                                                                                        >  2:249773/1‑149 (MQ=255)
                                                                aGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTg                                                                                  >  1:347243/1‑149 (MQ=255)
                                                                   tCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGttt                                                                               >  1:36290/1‑149 (MQ=255)
                                                                     gATACTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCAACTTCTCTCCATTGAATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTGCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTg                                                                             <  2:56586/149‑1 (MQ=255)
                                                                      aTTCTTAACCCCTTCACCATTGTGTCGTGATTAACACTTCTCTCCTTCTCTCCATTGCATGGCATAGGCGAGAGTGTGTTATCCCTGAATTTCATGAAGTCGGTTCGACCAGTGGCTTGCTCCCCGCAAGTCTTTAATGCCTGTTTTGc                                                                            <  2:865585/149‑1 (MQ=255)
                                                                                       cATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCt                                                           >  2:618022/1‑149 (MQ=255)
                                                                                       cATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCt                                                           >  1:457778/1‑149 (MQ=255)
                                                                                           tggtCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGt                                                       <  2:1096723/147‑1 (MQ=255)
                                                                                             gtCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTTGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGc                                                     >  1:64305/1‑149 (MQ=255)
                                                                                              tCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGcc                                                    >  1:463518/1‑149 (MQ=255)
                                                                                               cGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCGCAGTGCCt                                                   >  1:254590/1‑149 (MQ=255)
                                                                                               cGTGATAAACACGGCTCACCGTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCt                                                   <  1:225129/149‑1 (MQ=255)
                                                                                                 tGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTgtgtttatcacgacacaatggttaaggctttaagaatcgagcttgatgggcttaggcgtaagatcgtaatgaacgaaatcgttaccaactaaggaagcaga                                                 <  1:1030016‑M2/149‑102 (MQ=255)
                                                                                                 tGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGc                                                 >  2:64033/1‑149 (MQ=255)
                                                                                                 tGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGc                                                 >  1:1100445/1‑149 (MQ=255)
                                                                                                    tAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCAtt                                              >  2:422256/1‑149 (MQ=255)
                                                                                                    tAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGGCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCAtt                                              <  2:949242/149‑1 (MQ=255)
                                                                                                       acacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTTTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           <  2:303297/149‑1 (MQ=255)
                                                                                                       acacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           <  1:1127016/149‑1 (MQ=255)
                                                                                                       acacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           <  2:968501/149‑1 (MQ=255)
                                                                                                       acacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           <  1:925119/149‑1 (MQ=255)
                                                                                                       acacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTGAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           >  2:367211/1‑149 (MQ=255)
                                                                                                       acacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGGGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           <  2:716464/149‑1 (MQ=255)
                                                                                                       acacGGCGCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTACTAACAAAATGCGGGCCTCAGTGCCTGCATTTgg                                           <  1:950020/149‑1 (MQ=255)
                                                                                                        cacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTgtgtttatcacgacacaagggttaaggctttaagaatcgagcttgatgggcttaggcgtaagatcttaatgaacgaaatcgttaacaactaaggaagcagacggaagt                                          <  1:884393‑M2/149‑109 (MQ=255)
                                                                                                        cacGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTTTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGc                                          <  1:130249/149‑1 (MQ=255)
                                                                                                           ggCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGGGAGTCTTAGCCATGAAATTCATGAACACGGTTCGACCCGGGGCTTGACCCCCGCAAGTCTATATTGCCTGTTTTGCTAACAAATTGCGGGCCTCACTGCCAGCATTTGGctct                                       >  2:1078906/1‑149 (MQ=255)
                                                                                                           ggCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGctct                                       <  2:843404/149‑1 (MQ=255)
                                                                                                           ggCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGATCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGctct                                       <  1:1062806/149‑1 (MQ=255)
                                                                                                             cTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGCcgtgttcatcacgacacaatggttaaggctttaagaatcgagcttgatgggcttaggcgtaagatcgtaatgaacgaaatcgttaccaactaaggaagaagacggaagtaagc                                     <  1:684545‑M2/149‑114 (MQ=255)
                                                                                                                aCCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATctg                                  <  1:723740/149‑1 (MQ=255)
                                                                                                                 ccTTCTCTCCATTGCATGGCAGAGAAGGTGAGCcgtgtttatcacgacacaatggttaaggctttaagaatcgagcttgatgggcttaggcgtaagatcgtaatgaacgaaatcgttaccaactaaggaagcagacggaagtaagcatg                                  <  1:88346‑M2/149‑117 (MQ=255)
                                                                                                                 ccTTCTCTCCATTCCATGGCAGAGGGGTGAGTGTGTTAGCCTTGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATctgc                                 <  1:643764/149‑1 (MQ=255)
                                                                                                                   ttCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATctgctg                               >  2:282659/1‑149 (MQ=255)
                                                                                                                   ttCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATctgctg                               >  2:82537/1‑149 (MQ=255)
                                                                                                                   ttCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATctgctg                               >  2:100782/1‑149 (MQ=255)
                                                                                                                    tctctcCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGCACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGGTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCtgctgc                              >  1:998002/1‑149 (MQ=255)
                                                                                                                    tctctcCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCATCAGTGCCTGCATTTGGCTCTATCtgctgc                              >  2:78064/1‑149 (MQ=255)
                                                                                                                           aTTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCACACGtt                       >  2:127862/1‑149 (MQ=255)
                                                                                                                           aTTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGtt                       <  1:727268/149‑1 (MQ=255)
                                                                                                                           aTTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGtt                       <  2:263508/149‑1 (MQ=255)
                                                                                                                            ttGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGttt                      >  1:997723/1‑149 (MQ=255)
                                                                                                                              gCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAg                    <  1:1161019/149‑1 (MQ=255)
                                                                                                                                aTGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCg                  >  2:674809/1‑149 (MQ=255)
                                                                                                                                  ggCAGAGGGGTTAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTc                <  2:320759/149‑1 (MQ=255)
                                                                                                                                  ggCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTc                >  1:106252/1‑149 (MQ=255)
                                                                                                                                  ggCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTc                <  1:595759/149‑1 (MQ=255)
                                                                                                                                     agagGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTc             <  2:21849/149‑1 (MQ=255)
                                                                                                                                     agagGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTc             <  1:533954/149‑1 (MQ=255)
                                                                                                                                         gggTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGc         <  2:1100445/149‑1 (MQ=255)
                                                                                                                                            gTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGcaa       <  2:117769/149‑1 (MQ=255)
                                                                                                                                               aGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGATGCAAACGTTTAGCGTCTTCCAGcaacaa    >  2:1169916/1‑149 (MQ=255)
                                                                                                                                               aGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATATGCTGCAAACGTTTAGCGTCTTCCAGcaacaa    >  2:656659/1‑149 (MQ=255)
                                                                                                                                                gtgtgtTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGCAACAAt   <  1:156226/149‑1 (MQ=255)
                                                                                                                                                gtgtgtTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGCAACAAt   <  1:464115/149‑1 (MQ=255)
                                                                                                                                                gtgtgtTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCATGCGCCCCGCAAGTGTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATATGGCTCTATCTGCTGCAAACGTTTATCGTCTTCCAGCAACAAt   >  1:341525/1‑149 (MQ=255)
                                                                                                                                                 tgtgtTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGCAACAATg  <  2:158726/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CTTCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAAAGCCTTAACCATTGTGTCGTGATAAACACGGCTCACCTTCTCTCCATTGCATGGCAGAGGGGTGAGTGTGTTAGCCATGAAATTCATGAACTCGGTTCGACCAGGGGCTTGCGCCCCGCAAGTCTTTAATGCCTGTTTTGCTAACAAAATGCGGGCCTCAGTGCCTGCATTTGGCTCTATCTGCTGCAAACGTTTAGCGTCTTCCAGCAACAATG  >  NC_000913/1201761‑1202053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.