mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 143 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 337 (1.040) | 4 (0.010) | 4/264 | NT | 1.2% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 338 (1.100) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4585553 = | 370 (1.140) | 4 (0.010) | 4/266 | NT | 1.1% | coding (1209/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | 4585576 = | 340 (1.100) | coding (1186/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4583137 | 291 (0.900) | 7 (0.020) | 4/266 | NT | 2.3% | intergenic (‑89/+112) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583224 | 321 (1.040) | intergenic (‑176/+25) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4558661 | 367 (1.130) | 4 (0.010) | 3/266 | NT | 1.1% | coding (866/1173 nt) | iadA | isoaspartyl dipeptidase |
| ? | NC_000913 | = 4558693 | 383 (1.240) | coding (834/1173 nt) | iadA | isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4467556 = | 315 (0.970) | 5 (0.020) | 3/264 | NT | 1.7% | intergenic (+72/‑69) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter |
| ? | NC_000913 | 4467585 = | 271 (0.880) | intergenic (+101/‑40) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter | |||||
| * | ? | NC_000913 | = 4434647 | NA (NA) | 7 (0.020) | 4/268 | NT | 1.9% | coding (1919/1944 nt) | cpdB | 2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase |
| ? | NC_000913 | = 4434675 | 368 (1.180) | coding (1891/1944 nt) | cpdB | 2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase | |||||
| * | ? | NC_000913 | = 4405038 | 344 (1.060) | 8 (0.030) | 3/266 | NT | 2.3% | coding (352/1299 nt) | purA | adenylosuccinate synthetase |
| ? | NC_000913 | = 4405046 | 347 (1.120) | coding (360/1299 nt) | purA | adenylosuccinate synthetase | |||||
| * | ? | NC_000913 | = 4372705 | 360 (1.110) | 8 (0.030) | 5/262 | NT | 2.2% | intergenic (+34/‑104) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein |
| ? | NC_000913 | = 4372719 | 365 (1.200) | intergenic (+48/‑90) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein | |||||
| * | ? | NC_000913 | 4363384 = | 354 (1.090) | 5 (0.020) | 4/262 | NT | 1.5% | coding (1659/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC |
| ? | NC_000913 | 4363422 = | 302 (0.990) | coding (1621/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC | |||||
| * | ? | NC_000913 | 4320612 = | 449 (1.390) | 3 (0.010) | 3/268 | NT | 0.69% | coding (52/1065 nt) | phnI | ribophosphonate triphosphate synthase complex putative catalytic subunit |
| ? | NC_000913 | 4320644 = | 431 (1.380) | coding (20/1065 nt) | phnI | ribophosphonate triphosphate synthase complex putative catalytic subunit | |||||