New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 244659553 (0.890)5 (0.090) 3/268 NT 9.5% coding (879/1086 nt) aroC chorismate synthase
?NC_000913 = 2446636 44 (0.760)coding (838/1086 nt) aroC chorismate synthase

GATCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAAGCCGTCGCCAATTT  >  NC_000913/2446447‑2446743
                                                                                                                                                    |                                                                                                                                                    
gaccccttaaaccgAGCGCCAGCATCGCTTCTGCGATCGGCACGGCGCGGATCCCGACACCGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATTGTACGACCCTGCACGGTAATGCTGGAGGTCGGT                                                                                                                                                      <  2:676552‑M1/143‑1 (MQ=255)
gATCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCACAGCGGTTAATGGTCCGACCCGGCACGGTAATGCTGGAGGTCGGT                                                                                                                                                      >  2:210189‑M1/1‑149 (MQ=255)
 aTCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGCCGGCCTTTGGTGACCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCTCGGTAATGCTGGAGGTCGGtt                                                                                                                                                     >  1:361084/1‑149 (MQ=255)
 aTCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGtt                                                                                                                                                     >  2:520820/1‑149 (MQ=255)
  tCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGttt                                                                                                                                                    >  1:426334/1‑149 (MQ=255)
  tCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGGTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGttt                                                                                                                                                    <  2:562380/149‑1 (MQ=255)
   ccATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTc                                                                                                                                                   <  1:88906/149‑1 (MQ=255)
     ataaaaaCGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGAGCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAg                                                                                                                                                 <  2:433955/146‑1 (MQ=255)
      ttAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAgc                                                                                                                                                <  1:152500/149‑1 (MQ=255)
        aaaaCGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAgcgc                                                                                                                                              >  1:866271/1‑149 (MQ=255)
        aaaaCGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAgcgc                                                                                                                                              <  2:1000440/149‑1 (MQ=255)
        aaaaCGAGCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAgcgc                                                                                                                                              <  1:130680/149‑1 (MQ=255)
         aaaCGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGcc                                                                                                                                             <  2:915943/149‑1 (MQ=255)
          aaCGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGAACCGGCACGGTAATGCTGGAGGTCGGTTTCAgcgcaa                                                                                                                                            >  1:401432/1‑147 (MQ=255)
          aaCGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCATCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCa                                                                                                                                            <  1:863876/149‑1 (MQ=255)
             gATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACTACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCatat                                                                                                                                         <  1:648520/149‑1 (MQ=255)
             gATCGCCAGCATCGCTGCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCAGGAGGTCGGTTTCAGCGCCatat                                                                                                                                         <  1:767341/149‑1 (MQ=255)
               tCGCCAGCATCGCTTCTGCGATCGGCACTTCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATGATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATgg                                                                                                                                       <  1:552164/149‑1 (MQ=255)
               tCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGGGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATgg                                                                                                                                       <  1:466733/149‑1 (MQ=255)
                    aGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGGGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGATAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAAt                                                                                                                                  <  1:308871/149‑1 (MQ=255)
                        tCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTatcagcagcgggcagcaaatcatt                                                                                                                              >  2:856231‑M1/1‑125 (MQ=255)
                        tCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTatcagcagcgggcagcaaatcatt                                                                                                                              >  2:673376‑M1/1‑125 (MQ=255)
                        tCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGAtt                                                                                                                              <  1:611642/149‑1 (MQ=255)
                         cGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGAttt                                                                                                                             <  2:205556/149‑1 (MQ=255)
                         cGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGAttt                                                                                                                             <  1:80841/149‑1 (MQ=255)
                              cTGCGATCGGCACTGCGCGGATCCCGACACAGGGAGCGTGACGGCCTTTGGTGAGCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTtgctgc                                                                                                                        <  1:736785/149‑1 (MQ=255)
                               tGCGATCGGCACTGCGCGGCTCCCGACACAGGGATCGTGACGTCCTTTGGTGATCATCTCACCTGCTGCGCCACAGCGGTTAATGGTACGACCCGGCCCGGTAATGCTGGAGGTCGGTTTCCGCGCCATATGGGCAATGAGTTGCTGcc                                                                                                                       >  1:607045/1‑149 (MQ=255)
                                      ggCACTGCGCGGATCCCGACACAGGGATCGTGCCGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGAGCCATATGGGCAATGATTTGCTGCCCgctgct                                                                                                                >  1:574378/1‑149 (MQ=255)
                                      ggCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCgctgct                                                                                                                <  2:24670/149‑1 (MQ=255)
                                      ggCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCgctgct                                                                                                                <  1:537308/149‑1 (MQ=255)
                                      ggCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGAGCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCgctgct                                                                                                                <  1:608789/149‑1 (MQ=255)
                                        cACTGCGCGGAGCCCGACACACGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGGGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGa                                                                                                              <  2:275859/149‑1 (MQ=255)
                                            gcgcGGATCCCGCCACAGGGATCGTGACGGCCTTTGGTGATCATCTCCACTTCTTCGCCAAAGCGGGTAATGGTTCGACCCGGCACGGTACTGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCAGctgctgctccc                                                                                                          >  1:932372/1‑144 (MQ=255)
                                             cgcgGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAACGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATaccg                                                                                                         <  2:734511‑M2/149‑5 (MQ=255)
                                              gcgGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTTATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATAccgc                                                                                                        >  1:850412/1‑149 (MQ=255)
                                               cgGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGCCCCGGCACGGTAATGCTGGAGGTCGGTatcagcagcgggcagcaaatcattgcccatatgtcgctgaaaccgac                                                                                                       <  1:959343‑M1/149‑48 (MQ=255)
                                               cgGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATAccgcc                                                                                                       <  2:507317/149‑1 (MQ=255)
                                               cgGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATAccgcc                                                                                                       <  2:880083/149‑1 (MQ=255)
                                                 gctCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCGCAACTTCTTCGCCAACGCGGTTAATGGTACGACCCGGCCCGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCga                                                                                                     <  2:1013412/147‑1 (MQ=255)
                                                   tCCCGCCACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGCCCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCgaga                                                                                                   >  1:718403/1‑149 (MQ=255)
                                                     ccGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAAt                                                                                                 <  1:370580/149‑1 (MQ=255)
                                                      cGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTatcagcagcgggcagcaaatcattgcccatatggcgctgaaaccgacctccagc                                                                                                <  1:673376‑M1/149‑55 (MQ=255)
                                                      cGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTatcagcagcgggcagcaaatcattgcccatatggcgctgaaaccgacctccagc                                                                                                <  1:856231‑M1/149‑55 (MQ=255)
                                                      cGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATg                                                                                                <  1:835899/149‑1 (MQ=255)
                                                            cgggATCGAGTCGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACCACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTTCTGATACCGCCGAGAATGccgccc                                                                                          <  2:824152/148‑1 (MQ=255)
                                                            aGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGccgccc                                                                                          >  2:150618/1‑149 (MQ=255)
                                                              ggATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGccgcccgc                                                                                        <  2:778457/149‑1 (MQ=255)
                                                                        ggCCTTTGGTGATCATCTCAACTTCTTCGCCAAGGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGctc                                                                              <  2:290425/149‑1 (MQ=255)
                                                                        ggCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGctc                                                                              >  2:929653/1‑149 (MQ=255)
                                                                         gCCTTTGGTGATAATCTTAAGTTCTTCGCCAAAGGGGTTAATGGTACGACCCGGCACGGTAATGCAGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGGCGAGAATGCCGCCCGCATGGTTGctct                                                                             <  2:1018717/149‑1 (MQ=255)
                                                                           cTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTgg                                                                           <  1:266229/149‑1 (MQ=255)
                                                                                 tGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCg                                                                     >  2:535965/1‑149 (MQ=255)
                                                                                  gATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATTGTTGATCTGGAAACCGt                                                                    >  2:114168/1‑149 (MQ=255)
                                                                                      atcTCAACTTCTTCGCCAAAGCGGTAAATGGTACGACCCGGCACGGTAAGGCTGGAGGTCGGTTTCAGCGCCATCTGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCttt                                                                <  1:720464/149‑1 (MQ=255)
                                                                                       tctcAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTg                                                               <  2:352778/149‑1 (MQ=255)
                                                                                        ctcAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTgg                                                              <  1:731031/149‑1 (MQ=255)
                                                                                                cttcGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCa                                                      >  1:42205/1‑149 (MQ=255)
                                                                                                   cGCCCAAGCGGTTAATGGTACGACCCGGCCCGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATcg                                                   <  2:469137/149‑1 (MQ=255)
                                                                                                   cGCCAAAGCGGTTAATTGTACGACCCGGGACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATcg                                                   <  2:654247/149‑1 (MQ=255)
                                                                                                   cGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGGCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATcg                                                   <  2:635939/149‑1 (MQ=255)
                                                                                                     ccAAATCGGGTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATcgcg                                                 <  2:385019/149‑1 (MQ=255)
                                                                                                     ccAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATcgcg                                                 >  2:617810/1‑149 (MQ=255)
                                                                                                      cAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCgg                                                >  2:123673/1‑149 (MQ=255)
                                                                                                                        gACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAgc                              >  1:760589/1‑149 (MQ=255)
                                                                                                                                      aTGCTGGAGGGCGGTTTCAGCGCCATATGGTCAATGATTTTCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCaaa                <  2:574378/149‑1 (MQ=255)
                                                                                                                                        gCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATaccgacctccagcattaccgtgccgggtcgtaccattaaccgctttggcgaagaagttgagatgatcaccaaaggccgtcacgatccctgtgtcg              <  1:856231‑M2/149‑96 (MQ=255)
                                                                                                                                        gCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATaccgacctccagcattaccgtgccgggtcgtaccattaaccgctttggcgaagaagttgagatgatcaccaaaggccgtcacgatccctgtgtcg              <  1:673376‑M2/149‑96 (MQ=255)
                                                                                                                                            gAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAAGCCGTc          <  2:361084/149‑1 (MQ=255)
                                                                                                                                            gAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAAAGCCGCCCGCATGGTTGCTCTGGAACCCGTCGATCGTGATTTCCTCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAACCCGTc          >  2:201892/1‑149 (MQ=255)
                                                                                                                                               gTCGGTTTCAGCGACATATGGGCAATGATTTGCTGCCCGCTGCTGATaccgacctccagcattaccgtgccggggcgtaccattaaccgctttggcgaagaagttgagatgatcaccaaaggccgtcacgatccctgtgtcgggatccg       <  1:959343‑M2/149‑103 (MQ=255)
                                                                                                                                                 cGGTatcagcagcgggcagcaaatcattgcccatatggcgctgaaaccgacctccagcattaccgtgccgggtcgtaccattaaccgcgttggcgaagaagttgagatgatcaccaaaggccgtcacgatccctgtgtcgggatccgcg     <  2:734511‑M1/149‑146 (MQ=255)
                                                                                                                                                 cGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCAGGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTTGCTGCCGCGCAGCGCCCCCACGTCAAAGCCGTCGCCaa     >  1:567650/1‑149 (MQ=255)
                                                                                                                                                   gTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAAGCCGTCGCCAAtt   >  1:727213/1‑149 (MQ=255)
                                                                                                                                                   gTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAAGCCGTCGCCAAtt   >  1:5099/1‑149 (MQ=255)
                                                                                                                                                   gTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAAGCCGTCGCCAAtt   >  2:146938/1‑149 (MQ=255)
                                                                                                                                                    tttCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACAACGTCACAGCCGTCGCCAAttt  >  2:648587/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GATCCATTAAAACGATCGCCAGCATCGCTTCTGCGATCGGCACTGCGCGGATCCCGACACAGGGATCGTGACGGCCTTTGGTGATCATCTCAACTTCTTCGCCAAAGCGGTTAATGGTACGACCCGGCACGGTAATGCTGGAGGTCGGTTTCAGCGCCATATGGGCAATGATTTGCTGCCCGCTGCTGATACCGCCGAGAATGCCGCCCGCATGGTTGCTCTGGAAACCGTCTTTGGTGATTTCATCGCGGTTCTGGCTGCCGCGCAGCGCCACCACGTCAAAGCCGTCGCCAATTT  >  NC_000913/2446447‑2446743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.