New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2559352	67 (0.740)	4 (0.050)	3/264	NT	5.3%	coding (495/1209 nt)	intZ	CPZ‑55 prophage; putative phage integrase
	?	NC_000913	= 2559381	78 (0.900)					coding (524/1209 nt)	intZ	CPZ‑55 prophage; putative phage integrase

GGTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGT  >  NC_000913/2559205‑2559499                                                                                                                                                    |                                                                                                                                                    ggTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCgg                                                                                                                                                    >  1:1554962/1‑149 (MQ=255)   ttGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAg                                                                                                                                                  >  1:1105192/1‑149 (MQ=255)   ttGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAg                                                                                                                                                  >  1:9366/1‑149 (MQ=255)   ttGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAg                                                                                                                                                  >  1:1347374/1‑149 (MQ=255)         ggtggtCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGAAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCCCCGGAGccgtcc                                                                                                                                            >  2:993708/1‑144 (MQ=255)          gtggtCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGccc                                                                                                                                           <  1:1266209/149‑1 (MQ=255)               cGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCGAg                                                                                                                                      >  2:1531984/1‑149 (MQ=255)                         tGCAAAACAGGTCAGCTCGGCACTAGTAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGGATTACTCAAGAAGAAAGACCGTTCCGCCCCGGCGCCGGCCCGCAAGCGGCGCCGgc                                                                                                                            >  2:1072250/1‑149 (MQ=255)                                 aGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTTCTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggt                                                                                                                    <  1:184948‑M2/149‑5 (MQ=255)                                 aGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggt                                                                                                                    <  1:1285723‑M2/149‑5 (MQ=255)                                 aGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggt                                                                                                                    >  2:470467‑M2/1‑145 (MQ=255)                                   gTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTga                                                                                                                  <  2:1477216/149‑1 (MQ=255)                                      aGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGAt                                                                                                               >  1:571845/1‑149 (MQ=255)                                          cGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgt                                                                                                           <  1:382031‑M1/149‑43 (MQ=255)                                            gCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCaa                                                                                                         <  2:658052/149‑1 (MQ=255)                                            gCACTAGAAAAAGACGGCTATACGGTACTTGGCAAGCGGTCGATTGTCGATATAAGCGCCCGGGACGTGCTGGCATTACTCCAGAAGAAAGAACGTAGCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCaa                                                                                                         <  1:142314/149‑1 (MQ=255)                                                 aGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTg                                                                                                    >  1:187072/1‑149 (MQ=255)                                                 aGAAAAAGACGTCTATCCCGTACTTGGCAAGCGGTCGAATGTCGATATAACCGCACGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGCGCAGGCCCGCAAGCTACGCAGGCGCATCGGTGAGATATTCAAGTTTg                                                                                                    >  2:869703/1‑149 (MQ=255)                                                  gAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGc                                                                                                   >  2:894619/1‑149 (MQ=255)                                                   aaaaaGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgttctttcttc                                                                                                  <  2:1143635‑M1/149‑52 (MQ=255)                                                   aaaaaGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgttctttcttc                                                                                                  <  2:370425‑M1/149‑52 (MQ=255)                                                   aaaaaGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGcc                                                                                                  <  2:1445337/149‑1 (MQ=255)                                                   aaaaaGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGcc                                                                                                  <  1:1316255/149‑1 (MQ=255)                                                    aaaaGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCg                                                                                                 <  2:3980/149‑1 (MQ=255)                                                    aaaaGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCg                                                                                                 <  1:1270354/149‑1 (MQ=255)                                                          cGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCa                                                                                           <  2:1581215/149‑1 (MQ=255)                                                            tCTATCCGGTACTTGTCAAGCGGGCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgttctttcttctggagtaat                                                                                         <  2:1087037‑M1/149‑61 (MQ=255)                                                              tATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGa                                                                                       >  2:308048/1‑149 (MQ=255)                                                               aTCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCCACCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGaa                                                                                      >  1:139665/1‑149 (MQ=255)                                                                  cGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTg                                                                                   <  2:1354518/149‑1 (MQ=255)                                                                    gTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGt                                                                                 >  1:1056868/1‑149 (MQ=255)                                                                    gTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGt                                                                                 <  2:983787/149‑1 (MQ=255)                                                                       cTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAAc                                                                              <  2:369809/149‑1 (MQ=255)                                                                         tGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGa                                                                            <  2:9366/149‑1 (MQ=255)                                                                          ggCAAGCGGTCGATTGTCGATATCACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAg                                                                           <  2:1297593/149‑1 (MQ=255)                                                                            cAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGa                                                                         >  1:1090155/1‑149 (MQ=255)                                                                                   tCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGt                                                                  >  1:669079/1‑149 (MQ=255)                                                                                   tCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGt                                                                  <  2:1554962/149‑1 (MQ=255)                                                                                   tCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGt                                                                  >  1:1030037/1‑149 (MQ=255)                                                                                       ttGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCa                                                              >  2:561505/1‑149 (MQ=255)                                                                                          tCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTg                                                                                   <  1:2851/125‑1 (MQ=255)                                                                                          tCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTg                                                                                   >  2:2851/1‑125 (MQ=255)                                                                                          tCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGAt                                                           <  1:675157/149‑1 (MQ=255)                                                                                            gATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCt                                                         <  1:526207/149‑1 (MQ=255)                                                                                            gATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCt                                                         >  1:1419994/1‑149 (MQ=255)                                                                                             atatAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCACGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCtt                                                        >  1:715127/1‑149 (MQ=255)                                                                                               ataACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGa                                                      <  2:1090155/149‑1 (MQ=255)                                                                                               ataACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGa                                                      <  2:346399/149‑1 (MQ=255)                                                                                                taACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTGATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGAt                                                     >  2:721109/1‑149 (MQ=255)                                                                                                  aCCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATAc                                                   >  1:937217/1‑149 (MQ=255)                                                                                                    cGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTGATCAACGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACgg                                                 >  1:1498543/1‑149 (MQ=255)                                                                                                     gCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGTGCAGGCCCGCAAGCTTCGCCGTCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGc                                                <  1:327626/149‑1 (MQ=255)                                                                                                      cccGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCa                                               >  1:178921/1‑149 (MQ=255)                                                                                                          tGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGa                                           >  2:755855/1‑149 (MQ=255)                                                                                                             cGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAGCTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAgg                                        >  2:24482/1‑149 (MQ=255)                                                                                                              gTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGc                                       <  1:391857/149‑1 (MQ=255)                                                                                                                   ggCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCccgcc                                  >  2:1139646/1‑149 (MQ=255)                                                                                                                    gCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCccgc                                   >  2:1159252/1‑147 (MQ=255)                                                                                                                    gCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCccgc                                   <  1:1159252/147‑1 (MQ=255)                                                                                                                      aTTACTCCAGAAGAACGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGGAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGAc                               <  1:993708/149‑1 (MQ=255)                                                                                                                      aTTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggtgcggtacgttctttcttctggagtaatgccagcacgtcacgggcggttatatcgacaatcgcccgcttgacaagtaccggataga                               <  2:1087037‑M2/149‑90 (MQ=255)                                                                                                                      aTTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGAc                               >  1:72618/1‑149 (MQ=255)                                                                                                                       ttACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGAcc                              <  2:669079/149‑1 (MQ=255)                                                                                                                       ttACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGAcc                              <  2:1030037/149‑1 (MQ=255)                                                                                                                         aCTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCTAGCTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATCCGGCACTGAAGGCCCGCCGACCTg                            <  1:200630/149‑1 (MQ=255)                                                                                                                          cTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAACGCCCGCCGACCTgg                           >  2:115456/1‑149 (MQ=255)                                                                                                                           tCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGt                          <  2:571845/149‑1 (MQ=255)                                                                                                                              agaagaAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTcaa                       >  1:1209623/1‑148 (MQ=255)                                                                                                                               gaagaaAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggtgcggtacgttctttcttctggagtaatgccagcacgtcacgggcggttatatcgacaatcgaccgcttgccaagtaccggatagacgtcttttt                      <  2:1143635‑M2/149‑99 (MQ=255)                                                                                                                               gaagaaAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggtgcggtacgttctttcttctggagtaatgccagcacgtcacgggcggttatatcgacaatcgaccgcttgccaagtaccggatagacgtcttttt                      <  2:370425‑M2/149‑99 (MQ=255)                                                                                                                                aagaaagaACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCAGCCGACCTGGTCACaa                     >  1:980585/1‑149 (MQ=255)                                                                                                                                  gaaagaaCGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAAcg                   >  2:1409376/1‑149 (MQ=255)                                                                                                                                   aaagaaCGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAAcgc                  >  1:1221613/1‑149 (MQ=255)                                                                                                                                    aagaaCGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAAcgcg                 >  2:1201302/1‑149 (MQ=255)                                                                                                                                     agaaCGTACCGCACCGGATCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCCCCACGCGt                >  1:268405/1‑149 (MQ=255)                                                                                                                                      gaaCGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTg               >  2:897908/1‑149 (MQ=255)                                                                                                                                       aaCGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTgg              <  2:1495789/149‑1 (MQ=255)                                                                                                                                        aCGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATcggtgcggtacgttctttcttctggagtaatgccagcacgtcacgggcggttatatcgacaatcgaccgcttgccaagtaccggatagacgtctttttctagtgccg             <  1:382031‑M2/149‑108 (MQ=255)                                                                                                                                         cGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGAt            >  2:60588/1‑149 (MQ=255)                                                                                                                                          gTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATa           >  1:8837/1‑149 (MQ=255)                                                                                                                                            aCCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATAACCGAACTGGTAAAGAGGATTCCGTTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGACACAACGCGAGGATAcc         >  2:855897/1‑149 (MQ=255)                                                                                                                                               gCACCTGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACAGAACTGGTAACGAGGAATAAGGTTGAAGATCTTGATACGGCAATGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGAt      >  1:1278718/1‑149 (MQ=255)                                                                                                                                               gCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGAt      <  2:937217/149‑1 (MQ=255)                                                                                                                                                 aCCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgttctttcttctggagtaatgccagcacgtcacgggcggttatatcgacaatcgaccgcttgccaagtaccggatagacgtctttttctagtgccgatctgacct    >  2:470467‑M1/1‑4 (MQ=255)                                                                                                                                                 aCCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgttctttcttctggagtaatgccagcacgtcacgggcggttatatcgacaatcgaccgcttgccaagtaccggatagacgtctttttctagtgccgatctgacct    <  1:1285723‑M1/149‑146 (MQ=255)                                                                                                                                                 aCCGatgcgccggcgtagcttgcgggcctgctccggtgcggtacgttctttcttctggagaaatgccagcacgtcacgggcggttatatcgacaatcgaccgcttgccaagtaccggatagacgtctttttctagtgccgatctgacct    <  1:184948‑M1/149‑146 (MQ=255)                                                                                                                                                 aCCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCTGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTa    <  1:727565/149‑1 (MQ=255)                                                                                                                                                 aCCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTa    <  2:1596904/149‑1 (MQ=255)                                                                                                                                                   cGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGt  <  1:308048/149‑1 (MQ=255)                                                                                                                                                   cGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGt  <  1:869703/149‑1 (MQ=255)                                                                                                                                                   cGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTAATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGt  <  2:1583521/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GGTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGT  >  NC_000913/2559205‑2559499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.