BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4488413	89 (0.990)	3 (0.040)	3/252	NT	3.3%	intergenic (+13/+148)	lptG/yjgR	lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold
*	?	NC_000913	= 4488457	92 (1.110)	3 (0.040)	3/252	NT	3.3%	intergenic (+57/+104)	lptG/yjgR	lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold
Rejected: Frequency below/above cutoff threshold.

Only 100 of 116 total aligned reads displayed.

TTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACT  >  NC_000913/4488266‑4488561

tttGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAAt                                                                                                                                                     >  2:1247087/1‑149 (MQ=255)

   gTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATaaa                                                                                                                                                  <  1:226134/149‑1 (MQ=255)

      ttctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAggg                                                                                                                                               >  1:1017205/1‑149 (MQ=255)

      ttctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAggg                                                                                                                                               <  2:657768/149‑1 (MQ=255)

      ttctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAggg                                                                                                                                               >  1:1263199/1‑149 (MQ=255)

      ttctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAggg                                                                                                                                               >  1:590861/1‑149 (MQ=255)

        ctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCAACGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAg                                                                                                                                             >  2:627401/1‑149 (MQ=255)

          aCGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAAAGAACGAATAAAGGGAGCg                                                                                                                                           >  1:1020463/1‑149 (MQ=255)

             tACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGaaa                                                                                                                                        <  1:1194809/149‑1 (MQ=255)

               cTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGc                                                                                                                                      >  2:536372/1‑149 (MQ=255)

                tGGACCAGATCTTCGGCCCGCTGACGTTGGGTTATGGCATCCCGCCGATCATCGGCGCGCTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGTAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCt                                                                                                                                     >  1:1047656/1‑149 (MQ=255)

                  gACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTcc                                                                                                                                   >  1:1450404/1‑149 (MQ=255)

                  gACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCGTCTT‑‑‑AATCAGCCTGTGGCGGTTAATGAGAATATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTcc                                                                                                                                   >  1:227809/1‑149 (MQ=255)

                     cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCTTTCGCTCCCtt                                                                                                                                >  1:326219/1‑149 (MQ=255)

                     cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCtt                                                                                                                                >  1:37228/1‑149 (MQ=255)

                     cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCtt                                                                                                                                >  1:104324/1‑149 (MQ=255)

                     cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCtt                                                                                                                                <  1:1587997/149‑1 (MQ=255)

                      aGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCttt                                                                                                                               >  2:1540990/1‑149 (MQ=255)

                      aGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCttt                                                                                                                               >  2:810853/1‑149 (MQ=255)

                       gATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAACGGGAGCGAAAGCTCCCTtta                                                                                                                              <  1:566441/149‑1 (MQ=255)

                       gATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTtta                                                                                                                              >  2:6053/1‑149 (MQ=255)

                       gATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTtta                                                                                                                              >  1:505950/1‑149 (MQ=255)

                       gATCATCGGCCCGCTGACGTTGGTTTATTGCATCCGGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGTCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTtta                                                                                                                              <  2:74357/149‑1 (MQ=255)

                           ttCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTtattat                                                                                                                          >  2:356346/1‑149 (MQ=255)

                            tCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTattatt                                                                                                                         <  2:589372/149‑1 (MQ=255)

                              ggCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTtattat                                                                                                                          >  2:510274/1‑149 (MQ=255)

                              ggCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGt                                                                                                                       >  1:682530/1‑149 (MQ=255)

                              ggCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGt                                                                                                                       <  1:564430/149‑1 (MQ=255)

                               gCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGtt                                                                                                                      >  1:1343585/1‑149 (MQ=255)

                                cccGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTa                                                                                                                     <  1:1149208/149‑1 (MQ=255)

                                     tGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCaaa                                                                                                                <  1:438693/149‑1 (MQ=255)

                                        ggTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGACTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAgtg                                                                                                             <  2:31941/148‑1 (MQ=255)

                                         gTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAAgcacactttgctaacaataataaagggagctttcgctccctt                                                                                                            <  2:801075‑M1/149‑43 (MQ=255)

                                         gTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAgtgt                                                                                                            >  1:436515/1‑149 (MQ=255)

                                           tGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAAgcacactttgctaacaataataaagggagctttcgctcccttta                                                                                                          <  1:89254‑M1/149‑45 (MQ=255)

                                                  tGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcg                                                                                                      >  1:510274‑M2/1‑145 (MQ=255)

                                                  tGGCAGCCCGCCGATCATCGGCGCAACGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGATCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttc                                                                                                   >  2:104680‑M2/1‑142 (MQ=255)

                                                    gCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCGG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcat                                                                                                 <  2:456177‑M2/149‑10 (MQ=255)

                                                    gCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcat                                                                                                 <  1:125081‑M2/149‑10 (MQ=255)

                                                           gccgATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggtta                                                                                          <  2:1080588‑M1/149‑61 (MQ=255)

                                                                  atcGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAaataat                                                                                   >  1:45122/1‑149 (MQ=255)

                                                                   tcGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCTTTCATTCCTGAAAAATAAtt                                                                                  >  1:896919/1‑149 (MQ=255)

                                                                       cgcACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCACTCCTGAAAAATAATTaaaa                                                                              <  2:137779/149‑1 (MQ=255)

                                                                          aCTGTTTCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATAATCCTGTGGCTGTTAATGAGAAAATAGTAACCGAATGAACGAATAAAGGGAGCGAAATCTCCCTTTATTATTGTTAGCAAATTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTc                                                                           <  1:45215/149‑1 (MQ=255)

                                                                          aCTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTc                                                                           >  1:936881/1‑149 (MQ=255)

                                                                            tGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                         <  2:35611/149‑1 (MQ=255)

                                                                            tGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                         <  1:1540990/149‑1 (MQ=255)

                                                                            tGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                         <  1:96887/149‑1 (MQ=255)

                                                                            tGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                         <  2:863392/149‑1 (MQ=255)

                                                                             gtagCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                        <  1:1193087/146‑1 (MQ=255)

                                                                             gTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                        >  2:1285613/1‑149 (MQ=255)

                                                                             gTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                        <  2:1017205/149‑1 (MQ=255)

                                                                              ttGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTTGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAata                                                                       <  2:706592/149‑1 (MQ=255)

                                                                              ttGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAata                                                                       >  2:1041290/1‑149 (MQ=255)

                                                                                 ccAAGCGCCTG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTACCTTTATTATTGTTAGCAAAGTGTTCTTCGTTCATTCCTGAAAAATAATTAAAATTAAatatat                                                                    >  1:432389/1‑149 (MQ=255)

                                                                                 ccAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAatatat                                                                    <  2:1505502/149‑1 (MQ=255)

                                                                                  cAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATAtt                                                                   >  2:902771/1‑149 (MQ=255)

                                                                                       tccAG‑‑‑CTTCTTCTT‑‑‑AATGAGACTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTGCTGAAAAATAATTAAAATTCAATATATTGCAgt                                                              <  2:512797/148‑1 (MQ=255)

                                                                                       gcCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgt                                                              <  2:1207240/149‑1 (MQ=255)

                                                                                        ccAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAACGGGAGCGAAAGATCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtg                                                             >  2:1126927/1‑149 (MQ=255)

                                                                                        ccAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtt                                                             >  2:1056362/1‑148 (MQ=255)

                                                                                         cAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtgg                                                            >  1:1525435/1‑149 (MQ=255)

                                                                                                    tctt‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCa                                                    >  2:852402/1‑149 (MQ=255)

                                                                                                    tctt‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCa                                                    >  2:1233022/1‑149 (MQ=255)

                                                                                                           aaTCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGAt                                                <  1:356346/149‑1 (MQ=255)

                                                                                                             tCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATaa                                              >  2:934344/1‑149 (MQ=255)

                                                                                                               aGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGTGTGGGCATGATAAGa                                            >  1:1363877/1‑149 (MQ=255)

                                                                                                               aGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAAAGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGTCATGATAAGa                                            >  2:416099/1‑149 (MQ=255)

                                                                                                                     tgGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTTTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGcc                                      >  2:456840/1‑149 (MQ=255)

                                                                                                                       gCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCAGTCCTGAAAAAAAATTAAAATTCAATATATTGCAGTTGGGTGGGCATGATAAGACGCGCCAg                                    >  2:789669/1‑149 (MQ=255)

                                                                                                                         tGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCg                                  >  1:484117/1‑149 (MQ=255)

                                                                                                                            tAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCg                               <  2:590861/149‑1 (MQ=255)

                                                                                                                              aTGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCa                             >  2:1508819/1‑149 (MQ=255)

                                                                                                                               tGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCAt                            <  2:1450309/149‑1 (MQ=255)

                                                                                                                                gagaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATc                           >  1:1328155/1‑149 (MQ=255)

                                                                                                                                   aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                        >  1:1507351/1‑149 (MQ=255)

                                                                                                                                   aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                        >  1:1331948/1‑149 (MQ=255)

                                                                                                                                   aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                        <  2:37228/149‑1 (MQ=255)

                                                                                                                                   aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                        <  2:1363877/149‑1 (MQ=255)

                                                                                                                                       tCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                    <  1:456177/149‑1 (MQ=255)

                                                                                                                                       tCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                    <  1:1096234/149‑1 (MQ=255)

                                                                                                                                         ttAACCGAATGAACGTATAAAGGGAGCGAATGCTCCCTTTATTATTGTTAGCAAAGGGTGCTTCGTTCATTCCTGAAAAATAATTACAATTCAATATATTGCAGTGGGGTGGGCATGATCCGACGCGCCAGCGTCGCATCAGGCAAAGa                  <  2:270829/148‑1 (MQ=255)

                                                                                                                                          tAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggc                 <  2:1080588‑M2/149‑90 (MQ=255)

                                                                                                                                            aCCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACaa               <  1:590338/149‑1 (MQ=255)

                                                                                                                                             ccGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACaaa              <  1:864693/149‑1 (MQ=255)

                                                                                                                                              cGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAAt             >  1:1075257/1‑149 (MQ=255)

                                                                                                                                                aaTGAACGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatg           <  2:974306‑M1/149‑140 (MQ=255)

                                                                                                                                                 aTGAACGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgc          <  1:125081‑M1/149‑141 (MQ=255)

                                                                                                                                                 aTGAACGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagccggcgcttggcaacagtgcgccgatgatcggcgggatgc          <  2:456177‑M1/149‑141 (MQ=255)

                                                                                                                                                  tGAACGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgcc         <  1:1505502‑M1/149‑142 (MQ=255)

                                                                                                                                                   gAACGAAgcacactttgctaacaataataaagggagctttcgatccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacgttgcgccgatgatcggcgggctgcca        >  2:104680‑M1/1‑7 (MQ=255)

                                                                                                                                                    aaCGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgataggcgggatgccat       >  2:639799‑M1/1‑6 (MQ=255)

                                                                                                                                                    aaCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGcc                                      >  2:553557/1‑118 (MQ=255)

                                                                                                                                                    aaCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGcc                                      <  1:553557/118‑1 (MQ=255)

                                                                                                                                                     aataaTAAAGGGAGCTTTCGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCt      >  1:928073/4‑149 (MQ=255)

                                                                                                                                                     aCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCt      >  2:898797/1‑149 (MQ=255)

                                                                                                                                                      cGAAgcacactttgctaacaataataaagggagctttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgcca     >  1:510274‑M1/1‑4 (MQ=255)

                                                                                                                                                        aaTAAAGGGAGCTTTCGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATACAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAc   >  2:1213483/1‑149 (MQ=255)

                                                                                                                                                        aaTAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAc   <  1:1041290/149‑1 (MQ=255)

                                                                                                                                                         aTAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACt  >  2:1171870/1‑149 (MQ=255)

TTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAG‑‑‑CTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACT  >  NC_000913/4488266‑4488561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.