BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4488413	89 (0.990)	3 (0.040)	3/252	NT	3.3%	intergenic (+13/+148)	lptG/yjgR	lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold
*	?	NC_000913	= 4488457	92 (1.110)	3 (0.040)	3/252	NT	3.3%	intergenic (+57/+104)	lptG/yjgR	lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold
Rejected: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

ATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACA  >  NC_000913/4488315‑4488606

aTGGCATCCCGCCTATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgtt                                                                                                                                                 >  2:639799‑M2/1‑143 (MQ=255)

 tGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcg                                                                                                                                                   >  1:510274‑M2/1‑145 (MQ=255)

 tGGCAGCCCGCCGATCATCGGCGCAACGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGATCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttc                                                                                                                                                >  2:104680‑M2/1‑142 (MQ=255)

  ggCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttca                                                                                                                                               <  1:1505502‑M2/149‑9 (MQ=255)

   gCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCGGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcat                                                                                                                                              <  2:456177‑M2/149‑10 (MQ=255)

   gCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcat                                                                                                                                              <  1:125081‑M2/149‑10 (MQ=255)

                catcGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAaataa                                                                                                                                 <  1:536372/149‑1 (MQ=255)

                 atcGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAaataat                                                                                                                                >  1:45122/1‑149 (MQ=255)

                  tcGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCTTTCATTCCTGAAAAATAAtt                                                                                                                               >  1:896919/1‑149 (MQ=255)

                      cgcACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCACTCCTGAAAAATAATTaaaa                                                                                                                           <  2:137779/149‑1 (MQ=255)

                         aCTGTTTCCAAGCGCCAGCTTCTTCTT‑‑‑AATAATCCTGTGGCTGTTAATGAGAAAATAGTAACCGAATGAACGAATAAAGGGAGCGAAATCTCCCTTTATTATTGTTAGCAAATTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTc                                                                                                                        <  1:45215/149‑1 (MQ=255)

                         aCTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTc                                                                                                                        >  1:936881/1‑149 (MQ=255)

                         aCTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTc                                                                                                                        <  1:45214/149‑1 (MQ=255)

                           tGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                                                                      <  2:35611/149‑1 (MQ=255)

                           tGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                                                                      <  1:1540990/149‑1 (MQ=255)

                           tGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                                                                      <  2:863392/149‑1 (MQ=255)

                           tGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCATCGTTCATACCTGAAAAATAATTAAAATTCaa                                                                                                                      >  2:1081027/1‑149 (MQ=255)

                            gtagCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                                                                     <  1:1193087/146‑1 (MQ=255)

                            gTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                                                                     <  2:1017205/149‑1 (MQ=255)

                            gTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                                                                     <  2:1263199/149‑1 (MQ=255)

                            gTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAat                                                                                                                     >  2:1285613/1‑149 (MQ=255)

                             ttGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTTGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAata                                                                                                                    <  2:706592/149‑1 (MQ=255)

                             ttGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAata                                                                                                                    >  2:1041290/1‑149 (MQ=255)

                                ccAAGCGCCTGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTACCTTTATTATTGTTAGCAAAGTGTTCTTCGTTCATTCCTGAAAAATAATTAAAATTAAatatat                                                                                                                 >  1:432389/1‑149 (MQ=255)

                                ccAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAatatat                                                                                                                 <  2:1505502/149‑1 (MQ=255)

                                 cAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATAtt                                                                                                                >  2:902771/1‑149 (MQ=255)

                                     cgcCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAg                                                                                                            <  1:810853/149‑1 (MQ=255)

                                      tccAGCTTCTTCTT‑‑‑AATGAGACTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTGCTGAAAAATAATTAAAATTCAATATATTGCAgt                                                                                                           <  2:512797/148‑1 (MQ=255)

                                      gcCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgt                                                                                                           <  2:1207240/149‑1 (MQ=255)

                                       ccAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAACGGGAGCGAAAGATCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtg                                                                                                          >  2:1126927/1‑149 (MQ=255)

                                       ccAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtt                                                                                                          >  2:1056362/1‑148 (MQ=255)

                                        cAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtgg                                                                                                         >  1:1525435/1‑149 (MQ=255)

                                                tctt‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCa                                                                                                 >  2:852402/1‑149 (MQ=255)

                                                tctt‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCa                                                                                                 >  2:1233022/1‑149 (MQ=255)

                                                   t‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGa                                                                                              <  2:1525435/149‑1 (MQ=255)

                                                       aaTCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGAt                                                                                             <  1:356346/149‑1 (MQ=255)

                                                         tCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATaa                                                                                           >  2:934344/1‑149 (MQ=255)

                                                         tCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATaa                                                                                           <  2:549568/149‑1 (MQ=255)

                                                           aGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGTGTGGGCATGATAAGa                                                                                         >  1:1363877/1‑149 (MQ=255)

                                                           aGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAAAGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGTCATGATAAGa                                                                                         >  2:416099/1‑149 (MQ=255)

                                                                 tgGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTTTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGcc                                                                                   >  2:456840/1‑149 (MQ=255)

                                                                   gCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCAGTCCTGAAAAAAAATTAAAATTCAATATATTGCAGTTGGGTGGGCATGATAAGACGCGCCAg                                                                                 >  2:789669/1‑149 (MQ=255)

                                                                     tGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCg                                                                               >  1:484117/1‑149 (MQ=255)

                                                                        tAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCg                                                                            <  2:590861/149‑1 (MQ=255)

                                                                          aTGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCa                                                                          >  2:1508819/1‑149 (MQ=255)

                                                                            gagaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATc                                                                        >  1:1328155/1‑149 (MQ=255)

                                                                              gaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAg                                                                      >  2:814221/1‑149 (MQ=255)

                                                                               aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                                                                     <  2:37228/149‑1 (MQ=255)

                                                                               aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                                                                     <  2:1363877/149‑1 (MQ=255)

                                                                               aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                                                                     >  1:1507351/1‑149 (MQ=255)

                                                                               aaaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                                                                     >  1:1331948/1‑149 (MQ=255)

                                                                                   tCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                                                                 <  1:1096234/149‑1 (MQ=255)

                                                                                   tCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                                                                 <  1:456177/149‑1 (MQ=255)

                                                                                     ttAACCGAATGAACGTATAAAGGGAGCGAATGCTCCCTTTATTATTGTTAGCAAAGGGTGCTTCGTTCATTCCTGAAAAATAATTACAATTCAATATATTGCAGTGGGGTGGGCATGATCCGACGCGCCAGCGTCGCATCAGGCAAAGa                                                               <  2:270829/148‑1 (MQ=255)

                                                                                      tAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggc                                                              <  2:1080588‑M2/149‑90 (MQ=255)

                                                                                        aCCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACaa                                                            <  1:590338/149‑1 (MQ=255)

                                                                                         ccGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACaaa                                                           <  1:864693/149‑1 (MQ=255)

                                                                                          cGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAAt                                                          >  1:1075257/1‑149 (MQ=255)

                                                                                              tGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCg                                                      <  1:974306/149‑1 (MQ=255)

                                                                                                aaCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGcc                                                                                   >  2:553557/1‑118 (MQ=255)

                                                                                                aaCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGcc                                                                                   <  1:553557/118‑1 (MQ=255)

                                                                                                 aataaTAAAGGGAGCTTTCGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCt                                                   >  1:928073/4‑149 (MQ=255)

                                                                                                 aCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCt                                                   >  2:898797/1‑149 (MQ=255)

                                                                                                    aaTAAAGGGAGCTTTCGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATACAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAc                                                >  2:1213483/1‑149 (MQ=255)

                                                                                                    aaTAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAc                                                >  2:379511/1‑149 (MQ=255)

                                                                                                    aaTAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAc                                                <  1:1041290/149‑1 (MQ=255)

                                                                                                     aTAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACt                                               >  2:1171870/1‑149 (MQ=255)

                                                                                                      tAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaacca                                              <  1:89254‑M2/149‑106 (MQ=255)

                                                                                                      tAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACtt                                              <  2:45122/149‑1 (MQ=255)

                                                                                                       aaaGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTa                                             <  1:1247087/149‑1 (MQ=255)

                                                                                                        aaGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCttcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaac                                            <  2:801075‑M2/149‑108 (MQ=255)

                                                                                                        aaGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTAc                                            <  2:1450404/149‑1 (MQ=255)

                                                                                                        aaGGGAGCGAAAGCTACCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATCTTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTAc                                            <  1:1064438/149‑1 (MQ=255)

                                                                                                         aGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTAcc                                           >  2:1285641/1‑149 (MQ=255)

                                                                                                         aGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTAcc                                           >  2:592654/1‑149 (MQ=255)

                                                                                                          gggAGCGTAAGCACCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGGCGCATCAGGCAAAGACAAATCTCGCCTGACTTACct                                          <  1:646999/149‑1 (MQ=255)

                                                                                                               cGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTAACCttcttc                                     >  2:1552095/1‑149 (MQ=255)

                                                                                                                    gCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcccc                                >  2:1513417/1‑149 (MQ=255)

                                                                                                                     cTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTccccc                               >  1:204472/1‑149 (MQ=255)

                                                                                                                      tCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcccccc                              <  2:936881/149‑1 (MQ=255)

                                                                                                                        ccTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcccccccc                            >  2:1509007/1‑148 (MQ=255)

                                                                                                                        ccTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCa                            >  2:373205/1‑149 (MQ=255)

                                                                                                                        ccTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCa                            >  1:1082007/1‑149 (MQ=255)

                                                                                                                         cTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAg                           >  2:614054/1‑149 (MQ=255)

                                                                                                                           ttattaTTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCGCCCCCGCa                         >  1:2652/1‑149 (MQ=255)

                                                                                                                             attattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCaaa                       <  2:1507351/149‑1 (MQ=255)

                                                                                                                              ttattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATTATAAGACGCGCCAGCGTCGCATCAGGAAAAGACAAATCTCGCCTGACTTAACTTCTTCTCCCCCCCAGCAAAc                      >  1:1322549/1‑149 (MQ=255)

                                                                                                                                 ttGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCACCCCCAGCAAACTcc                   >  2:1317097/1‑149 (MQ=255)

                                                                                                                                   gTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc                 <  1:1285613/149‑1 (MQ=255)

                                                                                                                                   gTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAATGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc                 <  2:125081/149‑1 (MQ=255)

                                                                                                                                    ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTGAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCa                <  1:902771/149‑1 (MQ=255)

                                                                                                                                    ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCa                >  2:1233390/1‑149 (MQ=255)

                                                                                                                                    ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCa                >  2:549025/1‑149 (MQ=255)

                                                                                                                                    ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCa                <  2:505950/149‑1 (MQ=255)

                                                                                                                                      aGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAAc              >  1:15087/1‑149 (MQ=255)

                                                                                                                                      aGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCACCCCAGCAACCTCCCCAAc              >  2:420083/1‑149 (MQ=255)

                                                                                                                                         aaaGTGTGCTTCGTTCATTACTGAAAAATAATTTAAATTAAATATATTGCATTGGGGTGGGCATGTTAACTCGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAATTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATc           <  2:294726/149‑1 (MQ=255)

                                                                                                                                          aaGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCCACATcc          >  2:940217/1‑149 (MQ=255)

                                                                                                                                                gCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTa    <  1:934344/149‑1 (MQ=255)

                                                                                                                                                 cTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTATCACCCCCATCAAACTACCCACCATCCCGCGTAc   >  2:260881/1‑149 (MQ=255)

ATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTT‑‑‑AATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACA  >  NC_000913/4488315‑4488606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.