Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	NC_000913	2,357,874	Δ12 bp	9.7%	pseudogene (71‑82/198 nt)	ypaA →	pseudogene, C‑terminal fragment, Transposase_31 family

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2357873	74 (0.570)	8 (0.060)	7/278	NT	9.7%	pseudogene (70/198 nt)	ypaA	pseudogene, C‑terminal fragment, Transposase_31 family
	?	NC_000913	2357886 =	75 (0.580)					pseudogene (83/198 nt)	ypaA	pseudogene, C‑terminal fragment, Transposase_31 family

TGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGA  >  NC_000913/2357724‑2358022                                                                                                                                                      |                                                                                                                                                      tGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAAAGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTa                                                                                                                                                       >  2:1835807/1‑150 (MQ=255) tGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGAAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAATTTGGCTGGCAGGAAGGTa                                                                                                                                                       >  1:1124409/1‑150 (MQ=255)     ggAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAAtt                                                                                                                                                   <  2:2192745/150‑1 (MQ=255)        gCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCACCTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTACAGACTATTGCTGAACGGTTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGa                                                                                                                                                >  1:52956/1‑150 (MQ=255)             gCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGtt                                                                                                                                           >  1:1764737/1‑150 (MQ=255)                      gTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAAAGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAAc                                                                                                                                  >  2:1243814/1‑150 (MQ=255)                       tGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGATCTGTCAGTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACa                                                                                                                                 >  1:1169480/1‑150 (MQ=255)                          gaTTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGc                                                                                                                              >  2:176783/1‑150 (MQ=255)                          gaTTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGc                                                                                                                              >  2:558207/1‑150 (MQ=255)                              gtgCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGCCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCAtt                                                                                                                          >  1:1939730/1‑150 (MQ=255)                                  tGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTaaaa                                                                                                                      >  1:24671/1‑150 (MQ=255)                                    gCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCATATTGGCTGGCAGGAAGGTAAATTATAATTTTTTCATGAACAAGACATTTAAAtt                                                                                                                    >  1:1045577/1‑150 (MQ=25)                                     cGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTg                                                                                                                   >  2:1840815/1‑150 (MQ=255)                                      gACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGc                                                                                                                  >  1:1326500/1‑150 (MQ=255)                                          aCCCAACTCACTGATTCTGATATACCGAACTGTCAATAAAAGGAGAGATTAAACACTATAGATGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCTGTAAGGTAAATTAGATGGTTTGGATGAACAAGACATTATAATTGATTTg                                                                                                              >  2:1403211/1‑150 (MQ=255)                                           cccATCTCACTGATTCTGATATTCCTAAATGTCAAAAAAAGGATAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGTCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgc                                                                                                             <  1:747223/150‑1 (MQ=25)                                           cccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgc                                                                                                             >  2:552186/1‑150 (MQ=255)                                            ccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                            >  1:1486963/1‑150 (MQ=255)                                            ccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGAAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                            >  1:198610/1‑150 (MQ=255)                                             cAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcgc                                                                                                           >  1:922047/1‑150 (MQ=255)                                                  cACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCt                                                                                                      >  1:670463/1‑150 (MQ=255)                                                          cTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGCACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAgg                                                                                              >  2:1417757/1‑150 (MQ=255)                                                          cTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCTCAGGCTGGAACAgg                                                                                              >  2:1130373/1‑150 (MQ=255)                                                           tGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAggg                                                                                             >  1:518235/1‑150 (MQ=255)                                                              tatTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCtt                                                                                          >  1:158370/1‑150 (MQ=255)                                                               atTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCttt                                                                                         >  2:56468/1‑150 (MQ=255)                                                               atTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCttt                                                                                         >  1:498948/1‑150 (MQ=255)                                                                  ccGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGAt                                                                                      >  2:597002/1‑150 (MQ=255)                                                                  ccGAACTGTCATTAAAAGGAGAGATTAATGACTATTGATGAACGGCTCCGGCAGGAAGAACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTTATTTGCGCATGCTGGAACAGGGCTTTGAt                                                                                      >  1:2030782/1‑150 (MQ=37)                                                                         gTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGAcc                                                                               >  2:1409052/1‑150 (MQ=255)                                                                           cATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACTTCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAg                                                                             >  2:1413330/1‑150 (MQ=255)                                                                            aTTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAgg                                                                            >  1:2094839/1‑150 (MQ=255)                                                                              caaaaGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                       <  1:1194803/88‑1 (MQ=255)                                                                              caaaaGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                       >  2:1194803/2‑89 (MQ=255)                                                                                aaaGGAGAGATTAATGACTATTGCTGAACGGATGCGGCAGGAAGGACATAAAATTGGCTGGAAGGAAGGTAAATTAGAAGGTTTCCATTAACAATCCATTAAAATTGCTTTGCGAATGCTGGAAAAGGGATTTAATCGTGAACATCTGCt                                                                        >  2:400075/1‑150 (MQ=21)                                                                                 aaGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGACCAAGCCATTAAAATTGCTTTGCGCATGATGGAACTGGGGTTGGATCGTGCCCAGTTGATc                                                                       >  1:822304/1‑150 (MQ=25)                                                                                  aGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTcg                                                                      >  1:664088/1‑150 (MQ=255)                                                                                  aGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTcg                                                                      >  1:1588971/1‑150 (MQ=255)                                                                                     agagaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                       >  2:2036229/1‑82 (MQ=255)                                                                                     agagaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                       <  1:2036229/82‑1 (MQ=255)                                                                                      gagaGTAATGACTATTGCTGAACGGCTGCGGCAGGACGGACTTCATCATGGCTGGCAGTAAGGTAATCTCGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGc                                                                  <  1:1225970/150‑1 (MQ=25)                                                                                       agaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGAATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGcc                                                                 >  2:1356368/1‑150 (MQ=255)                                                                                        taTTAATGACTATTGATCAACGTATTCGGCACGTAGTTCATCATATAGGCTTGCATGAAGGAATATTAGAAGGTTTGCATGATCAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGAGGCCa                                                                <  1:1464481/149‑1 (MQ=18)                                                                                        gaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCa                                                                >  2:1242382/1‑150 (MQ=255)                                                                                        gaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCa                                                                >  2:1830718/1‑150 (MQ=255)                                                                                          ttAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCAcc                                                              >  1:1452042/1‑150 (MQ=255)                                                                                          ttAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCAcc                                                              >  2:562231/1‑150 (MQ=255)                                                                                               gACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCt                                                         >  2:1749934/1‑150 (MQ=255)                                                                                               gACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCt                                                         >  2:2021718/1‑150 (MQ=255)                                                                                                 cTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTaa                                                       >  1:1184996/1‑150 (MQ=255)                                                                                                      gCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGaa                                                  >  1:983370/1‑150 (MQ=255)                                                                                                       ctcaaCGGCTTCCGCATGAAGGACATCAATATGGCCCGCACGAAGGAACAGAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAg                                                 <  1:1867634/147‑1 (MQ=21)                                                                                                         gAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAtgcatgaacaatccattaaaattgctttgcgcatgctggagctgggctttgatcgtgacaatgtgctagcgcccacccagctaagagcagcggatctggcaccc                                               >  2:1602940‑M1/1‑46 (MQ=255)                                                                                                          aaCGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCg                                              >  1:1002596/1‑150 (MQ=255)                                                                                                           aCGGCTGCGGCAGGAAGGACATCAAAATGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGa                                             <  1:176783/150‑1 (MQ=255)                                                                                                                 gCGGCAGGCTCGACTTCAGATAGGCTCTCAGCACGGTACGTACGAAGGTAGGCATGATCAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCGTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGc                                       <  1:1348604/150‑1 (MQ=21)                                                                                                                 gCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGCACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGc                                       >  2:636304/1‑150 (MQ=255)                                                                                                                  cGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCa                                      >  1:1027359/1‑150 (MQ=255)                                                                                                                       ggatcgaCATCAACATGGCCGGCAGGAAGGTAAATAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGaa                                 <  1:1504954/145‑1 (MQ=37)                                                                                                                       ggaaggaCATCAAATTGGCTTGCAGGAAGGTAAATTCGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGaa                                 <  1:1906849/150‑1 (MQ=255)                                                                                                                       ggaaggaCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGaa                                 >  2:346242/1‑150 (MQ=255)                                                                                                                           ggaCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAAc                             >  2:142885/1‑150 (MQ=255)                                                                                                                              cATCAAATTGGCTGGCAGGAAGGTAtgcatgaacaagccattaaaattgcttttcgcatgctggatcagggctttgatcgtgacaatgtgctcgcgcccacccagctaagcgaagccgatctggcagccaataagcaataattaacacaa                          >  2:168353‑M1/1‑25 (MQ=255)                                                                                                                                tCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGAGCATGCTGGAACATGGCTTTGATCGTGACCAGGTTCTCGCGGCCACCCAGCTAATCGAAGCCGATCTGGCAGCGAATAACCACTa                        >  1:1584466/1‑150 (MQ=255)                                                                                                                                    aTTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTa                    <  1:558207/150‑1 (MQ=255)                                                                                                                                      tggctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAac                  <  2:498948/150‑1 (MQ=255)                                                                                                                                        gctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAacac                >  1:1108352/1‑150 (MQ=255)                                                                                                                                        gctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGAGCATGCTGGAACCGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCCGCGAATAACCACTAATTAacac                >  2:369301/1‑150 (MQ=255)                                                                                                                                         ctggcAGGAAGGTAtgcatgaacaagccattaaaattgctttgcgcatgctggaacagggctttgatcgtgaccaggtg                                                                                      <  1:953482‑M1/79‑66 (MQ=255)                                                                                                                                         ctggcAGGAAGGTAtgcatgaacaagccattaaaattgctttgcgcatgctggaacagggctttgatcgtgaccaggtg                                                                                      >  2:953482‑M1/1‑14 (MQ=255)                                                                                                                                         ctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGTGAATAACCACTAATTAAcaca               >  1:1821378/1‑150 (MQ=255)                                                                                                                                         ctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTATTTAacacc               >  1:1356584/1‑149 (MQ=255)                                                                                                                                         ctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAAcaca               <  2:24671/150‑1 (MQ=255)                                                                                                                                         cacgtacgaaggtatgcatgaacaagccattaaaattgctttgcgcatgctggaacagggctttgatcgtgaccaggtgctcgcggccacccagctaagcgaagccgatctggcagcgaataaccactaattaacacaggcccacagccg               <  1:1487612‑M1/143‑137 (MQ=255)                                                                                                                                           ggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAgg             >  2:1973227/1‑150 (MQ=255)                                                                                                                                            gcAGGAAGGTAAATTAGAAGGTTAGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGc            <  1:597002/150‑1 (MQ=255)                                                                                                                                              aGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATAAACACAGGccc          >  1:236017/1‑150 (MQ=255)                                                                                                                                               ggAAGGTAtgcatgaacaagccattaaaattgctttgcgcatgctggagcagggctttgatcgtgac                                                                                            >  1:1528906‑M1/1‑8 (MQ=255)                                                                                                                                               ggAAGGTAtgcatgaacaagccattaaaattgctttgcgcatgctggaacagggctttgatcgtgacctggtgctcgcggccacccagctaagcgaagccgatcttgcagcgagtaagacctaatttacacatccccaaagacgatcccc         >  2:136389‑M1/1‑8 (MQ=255)                                                                                                                                               ggAAGGTAtgcatgaacaagccattaaaattgctttgcgcatgctggaacagggctttgatcgtgac                                                                                            <  2:1528906‑M1/67‑60 (MQ=255)                                                                                                                                               ggAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCca         >  2:2205128/1‑150 (MQ=255)                                                                                                                                               ggAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCca         <  1:1830718/150‑1 (MQ=255)                                                                                                                                               ggAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTAGCGGACACCCAGCTAATCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGcccc         >  1:1526667/1‑149 (MQ=255)                                                                                                                                                gAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCcac        >  1:1816123/1‑150 (MQ=255)                                                                                                                                                 aaGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCcaca       >  2:71055/1‑150 (MQ=255)                                                                                                                                                   ggTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGc     >  2:1968823/1‑150 (MQ=255)                                                                                                                                                    gTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGcc    >  1:784091/1‑150 (MQ=255)                                                                                                                                                     tAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCg   >  1:260963/1‑150 (MQ=255)                                                                                                                                                      aaaTTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGa  >  1:10391/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGA  >  NC_000913/2357724‑2358022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.