Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	NC_000913	2,357,874	Δ12 bp	9.7%	pseudogene (71‑82/198 nt)	ypaA →	pseudogene, C‑terminal fragment, Transposase_31 family

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2357873	74 (0.570)	8 (0.060)	7/278	NT	9.7%	pseudogene (70/198 nt)	ypaA	pseudogene, C‑terminal fragment, Transposase_31 family
	?	NC_000913	2357886 =	75 (0.580)					pseudogene (83/198 nt)	ypaA	pseudogene, C‑terminal fragment, Transposase_31 family

GTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCT  >  NC_000913/2357745‑2358035                                                                                                                                              |                                                                                                                                                      gTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAAAGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAAc                                                                                                                                               >  2:1243814/1‑150 (MQ=255)  tGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGATCTGTCAGTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACa                                                                                                                                              >  1:1169480/1‑150 (MQ=255)     gaTTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGc                                                                                                                                           >  2:176783/1‑150 (MQ=255)     gaTTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGc                                                                                                                                           >  2:558207/1‑150 (MQ=255)         gtgCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGCCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCAtt                                                                                                                                       >  1:1939730/1‑150 (MQ=255)             tGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTaaaa                                                                                                                                   >  1:24671/1‑150 (MQ=255)               gCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCATATTGGCTGGCAGGAAGGTAAATTATAATTTTTTCATGAACAAGACATTTAAAtt                                                                                                                                 >  1:1045577/1‑150 (MQ=25)                cGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTg                                                                                                                                >  2:1840815/1‑150 (MQ=255)                 gACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGc                                                                                                                               >  1:1326500/1‑150 (MQ=255)                     aCCCAACTCACTGATTCTGATATACCGAACTGTCAATAAAAGGAGAGATTAAACACTATAGATGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCTGTAAGGTAAATTAGATGGTTTGGATGAACAAGACATTATAATTGATTTg                                                                                                                           >  2:1403211/1‑150 (MQ=255)                      cccATCTCACTGATTCTGATATTCCTAAATGTCAAAAAAAGGATAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGTCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgc                                                                                                                          <  1:747223/150‑1 (MQ=25)                      cccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgc                                                                                                                          >  2:552186/1‑150 (MQ=255)                       ccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                                         >  1:1486963/1‑150 (MQ=255)                       ccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGAAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcg                                                                                                                         >  1:198610/1‑150 (MQ=255)                        cAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTgcgc                                                                                                                        >  1:922047/1‑150 (MQ=255)                             cACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCt                                                                                                                   >  1:670463/1‑150 (MQ=255)                                     cTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGCACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAgg                                                                                                           >  2:1417757/1‑150 (MQ=255)                                     cTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCTCAGGCTGGAACAgg                                                                                                           >  2:1130373/1‑150 (MQ=255)                                      tGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAggg                                                                                                          >  1:518235/1‑150 (MQ=255)                                         tatTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCtt                                                                                                       >  1:158370/1‑150 (MQ=255)                                          atTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCttt                                                                                                      >  1:498948/1‑150 (MQ=255)                                          atTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCttt                                                                                                      >  2:56468/1‑150 (MQ=255)                                             ccGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGAt                                                                                                   >  2:597002/1‑150 (MQ=255)                                             ccGAACTGTCATTAAAAGGAGAGATTAATGACTATTGATGAACGGCTCCGGCAGGAAGAACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTTATTTGCGCATGCTGGAACAGGGCTTTGAt                                                                                                   >  1:2030782/1‑150 (MQ=37)                                                    gTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGAcc                                                                                            >  2:1409052/1‑150 (MQ=255)                                                      cATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACTTCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAg                                                                                          >  2:1413330/1‑150 (MQ=255)                                                       aTTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAgg                                                                                         >  1:2094839/1‑150 (MQ=255)                                                         caaaaGGAGAGATTAATGACTATTGCTGAACGGCTTCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                                    <  1:1194803/88‑1 (MQ=255)                                                         caaaaGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                                    >  2:1194803/2‑89 (MQ=255)                                                           aaaGGAGAGATTAATGACTATTGCTGAACGGATGCGGCAGGAAGGACATAAAATTGGCTGGAAGGAAGGTAAATTAGAAGGTTTCCATTAACAATCCATTAAAATTGCTTTGCGAATGCTGGAAAAGGGATTTAATCGTGAACATCTGCt                                                                                     >  2:400075/1‑150 (MQ=21)                                                            aaGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGACCAAGCCATTAAAATTGCTTTGCGCATGATGGAACTGGGGTTGGATCGTGCCCAGTTGATc                                                                                    >  1:822304/1‑150 (MQ=25)                                                             aGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTcg                                                                                   >  1:664088/1‑150 (MQ=255)                                                             aGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTcg                                                                                   >  1:1588971/1‑150 (MQ=255)                                                                agagaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                                    >  2:2036229/1‑82 (MQ=255)                                                                agagaTTAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCa                                                                                                                                                    <  1:2036229/82‑1 (MQ=255)                                                                 gagaGTAATGACTATTGCTGAACGGCTGCGGCAGGACGGACTTCATCATGGCTGGCAGTAAGGTAATCTCGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGc                                                                               <  1:1225970/150‑1 (MQ=25)                                                                  agaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGAATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGcc                                                                              >  2:1356368/1‑150 (MQ=255)                                                                   taTTAATGACTATTGATCAACGTATTCGGCACGTAGTTCATCATATAGGCTTGCATGAAGGAATATTAGAAGGTTTGCATGATCAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGAGGCCa                                                                             <  1:1464481/149‑1 (MQ=18)                                                                   gaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCa                                                                             >  2:1830718/1‑150 (MQ=255)                                                                   gaTTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCa                                                                             >  2:1242382/1‑150 (MQ=255)                                                                     ttAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCAcc                                                                           >  1:1452042/1‑150 (MQ=255)                                                                     ttAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCAcc                                                                           >  2:562231/1‑150 (MQ=255)                                                                          gACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCt                                                                      >  2:1749934/1‑150 (MQ=255)                                                                          gACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCt                                                                      >  2:2021718/1‑150 (MQ=255)                                                                            cTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTaa                                                                    >  1:1184996/1‑150 (MQ=255)                                                                                 gCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGaa                                                               >  1:983370/1‑150 (MQ=255)                                                                                  ctcaaCGGCTTCCGCATGAAGGACATCAATATGGCCCGCACGAAGGAACAGAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAg                                                              <  1:1867634/147‑1 (MQ=21)                                                                                     aaCGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCg                                                           >  1:1002596/1‑150 (MQ=255)                                                                                      aCGGCTGCGGCAGGAAGGACATCAAAATGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGa                                                          <  1:176783/150‑1 (MQ=255)                                                                                            gCGGCAGGCTCGACTTCAGATAGGCTCTCAGCACGGTACGTACGAAGGTAGGCATGATCAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCGTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGc                                                    <  1:1348604/150‑1 (MQ=21)                                                                                            gCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGCACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGc                                                    >  2:636304/1‑150 (MQ=255)                                                                                             cGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCa                                                   >  1:1027359/1‑150 (MQ=255)                                                                                                gaacggctacggcaggaagggcatcaaattggctggcaggaaggtaTGCATGAACAATCCATTAAAATTGCTTTGCGCATGCTGGAGCTGGGCTTTGATCGTGACAATGTGCTAGCGCCCACCCAGCTAAGAGCAGCGGATCTggcaccc                                                >  2:1602940‑M2/47‑147 (MQ=255)                                                                                                  ggatcgaCATCAACATGGCCGGCAGGAAGGTAAATAAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGaa                                              <  1:1504954/145‑1 (MQ=37)                                                                                                  ggaaggaCATCAAATTGGCTTGCAGGAAGGTAAATTCGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGaa                                              <  1:1906849/150‑1 (MQ=255)                                                                                                  ggaaggaCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGaa                                              >  2:346242/1‑150 (MQ=255)                                                                                                      ggaCATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAAc                                          >  2:142885/1‑150 (MQ=255)                                                                                                           tCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGAGCATGCTGGAACATGGCTTTGATCGTGACCAGGTTCTCGCGGCCACCCAGCTAATCGAAGCCGATCTGGCAGCGAATAACCACTa                                     >  1:1584466/1‑150 (MQ=255)                                                                                                               aTTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTa                                 <  1:558207/150‑1 (MQ=255)                                                                                                                 tggctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAac                               <  2:498948/150‑1 (MQ=255)                                                                                                                   gctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAacac                             >  1:1108352/1‑150 (MQ=255)                                                                                                                   gctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGAGCATGCTGGAACCGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCCGCGAATAACCACTAATTAacac                             >  2:369301/1‑150 (MQ=255)                                                                                                                    ctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGTGAATAACCACTAATTAAcaca                            >  1:1821378/1‑150 (MQ=255)                                                                                                                    ctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTATTTAacacc                            >  1:1356584/1‑149 (MQ=255)                                                                                                                    ctggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAAcaca                            <  2:24671/150‑1 (MQ=255)                                                                                                                     catcaaattggctggcaggaaggtaTGCATGAACAAGCCATTAAAATTGCTTTTCGCATGCTGGATCAGGGCTTTGATCGTGACAATGTGCTCGCGCCCACCCAGCTAAGCGAAGCCGATCTGGCAGCCAATAAGCAATAATTAacacaa                           >  2:168353‑M2/26‑149 (MQ=255)                                                                                                                      ggcAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAgg                          >  2:1973227/1‑150 (MQ=255)                                                                                                                       gcAGGAAGGTAAATTAGAAGGTTAGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGc                         <  1:597002/150‑1 (MQ=255)                                                                                                                         aGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATAAACACAGGccc                       >  1:236017/1‑150 (MQ=255)                                                                                                                          ggAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCca                      <  1:1830718/150‑1 (MQ=255)                                                                                                                          ggAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCca                      >  2:2205128/1‑150 (MQ=255)                                                                                                                          ggAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTAGCGGACACCCAGCTAATCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGcccc                      >  1:1526667/1‑149 (MQ=255)                                                                                                                           gAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCcac                     >  1:1816123/1‑150 (MQ=255)                                                                                                                            aaGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCcaca                    >  2:71055/1‑150 (MQ=255)                                                                                                                              ggTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGc                  >  2:1968823/1‑150 (MQ=255)                                                                                                                               gTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGcc                 >  1:784091/1‑150 (MQ=255)                                                                                                                                tAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCg                >  1:260963/1‑150 (MQ=255)                                                                                                                                ctggcaggaaggtaTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTg                                                                                       <  1:953482‑M2/65‑1 (MQ=255)                                                                                                                                ctggcaggaaggtaTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTg                                                                                       >  2:953482‑M2/15‑79 (MQ=255)                                                                                                                                cacgtacgaaggtaTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCg                <  1:1487612‑M2/136‑1 (MQ=255)                                                                                                                                 aaaTTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGa               >  1:10391/1‑150 (MQ=255)                                                                                                                                   aTTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATc             >  1:587716/1‑150 (MQ=255)                                                                                                                                     tAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATccc           >  2:669261/1‑150 (MQ=255)                                                                                                                                      ggaaggtaTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGATCGTGAc                                                                                             >  1:1528906‑M2/9‑67 (MQ=255)                                                                                                                                      ggaaggtaTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGAc                                                                                             <  2:1528906‑M2/59‑1 (MQ=255)                                                                                                                                      ggaaggtaTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCTGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTTGCAGCGAGTAAGACCTAATTTACACATCCCCAAAGACGATcccc          >  2:136389‑M2/9‑150 (MQ=255)                                                                                                                                      aGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATcccc          >  1:1689745/1‑150 (MQ=255)                                                                                                                                         aGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATg       >  2:512968/1‑150 (MQ=255)                                                                                                                                         aGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATg       >  2:1250754/1‑150 (MQ=255)                                                                                                                                         aGGTTTGCATGAACAAGCCATAAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCAATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATg       <  2:1169480/150‑1 (MQ=255)                                                                                                                                          ggTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGTAACAGGGCTTTGATCGTGTCCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATgg      <  1:1061097/150‑1 (MQ=255)                                                                                                                                           ttttGCATGAACAAGCCATAAAAATTGCTTTGAGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATggg     <  2:1124409/149‑1 (MQ=255)                                                                                                                                           gTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATggg     >  1:1549646/1‑150 (MQ=255)                                                                                                                                           gTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATggg     <  2:1108352/150‑1 (MQ=255)                                                                                                                                            tttGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCCGGCAGCGAATACCCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGc    >  1:966599/1‑150 (MQ=255)                                                                                                                                             ttGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGcc   >  1:742381/1‑150 (MQ=255)                                                                                                                                              tGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCGAAGCGAAGCCGATCTGGCAGCGAATACCCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCt  >  1:1110092/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                      GTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAATTAACACAGGCCCACAGCCGATCCCCATGGGCCT  >  NC_000913/2357745‑2358035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.