New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 346235985 (0.860)6 (0.070) 4/258 NT 6.8% coding (16/588 nt) gspJ putative general secretory pathway component, cryptic
?NC_000913 = 3462390 85 (0.930)coding (47/588 nt) gspJ putative general secretory pathway component, cryptic

Only 100 of 134 total aligned reads displayed.

CTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCACCATC  >  NC_000913/3462210‑3462508
                                                                                                                                                     |                                                                                                                                                     
cTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGC                                                                                                                                                       <  1:707799‑M1/150‑1 (MQ=255)
    cgcAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGCCATTACCCAGCGGTCAGACCACCTCGCTTACGCGATATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAggg                                                                                                                                                   >  1:1665155/1‑150 (MQ=255)
             atCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACAtt                                                                                                                                          <  1:555456/150‑1 (MQ=255)
               ccACTCAAGCAAAGACGGCACGCTTCTGGACCGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATAGCGAGCAGGGTTTCACATTGc                                                                                                                                        >  2:1637851/1‑150 (MQ=255)
                cACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACCTTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCAGAGTGCt                                                                                                                                       >  1:1296690/1‑150 (MQ=255)
                  cTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGATgg                                                                                                                                     >  1:1239887/1‑150 (MQ=255)
                  cTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACCGTGACATTACCCATCGGTCAGACAACCTCGCTTACGCGTTATCAAAGAATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTgg                                                                                                                                     <  1:305893/150‑1 (MQ=255)
                    cAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGAAg                                                                                                                                   <  2:1250632/150‑1 (MQ=255)
                    cAAGCAAAGACGGCAAGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAg                                                                                                                                   <  2:1043670/150‑1 (MQ=255)
                     aaGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAgg                                                                                                                                  <  2:1705266/150‑1 (MQ=255)
                      aGCAAAGACGGCACGCTTCTGGAACGCACCATGACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCCTCGATAATAAATCCGCGCAGGCCCAAGATGATTAATCGCCAGCAGGGTTTCACATTGATGGAGGt                                                                                                                                 >  1:898881/1‑150 (MQ=255)
                       gCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTc                                                                                                                                <  1:402168/150‑1 (MQ=255)
                       gCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACATCGCTTACGCGTTATCAAAGCATCTATAATAAATCAGTGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCAAATTGCTGGAGGTc                                                                                                                                >  2:838392/1‑150 (MQ=255)
                         aaaGACGGCACGCTTCTGGAACGCACAAGAACGGTGACATTACCCCGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATACATCCGGGCAGGCACAAGATGATTAATCGCCATCAGGGTTTCACATTGCTGGAGGTcct                                                                                                                              >  1:1311088/1‑148 (MQ=255)
                                 cACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgc                                                                                                                      <  1:793652‑M2/150‑3 (MQ=255)
                                   cGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctg                                                                                                                    <  2:750514‑M2/150‑5 (MQ=255)
                                    gcgtCTGGAAAGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTgg                                                                                                                   <  2:1554204/147‑1 (MQ=255)
                                    gCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctgg                                                                                                                   >  2:1547411‑M2/1‑145 (MQ=255)
                                     cTTCTGGAACTCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGAATCGATAATAAATCAGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggc                                                                                                                  >  2:1120104‑M2/1‑144 (MQ=255)
                                     cTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggc                                                                                                                  >  1:1317010‑M2/1‑144 (MQ=255)
                                      ttCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggcg                                                                                                                 >  2:59430‑M2/1‑143 (MQ=255)
                                       tCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggcga                                                                                                                <  2:925105‑M2/150‑9 (MQ=255)
                                       cgctgtagctgattgaactgctggatttctttctgtgagcgttgatgcaactcggaagcttgcgaaaaaatcataaacgccagcacgctaagcattgagaaAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGa                                                                                                                <  1:205150‑M1/49‑1 (MQ=255)
                                        cTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCTCTTACGCGTTATCAAAGAATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgat                                                                                                               <  2:1063828‑M1/150‑41 (MQ=255)
                                        cTGGAACGAACAATAACGTTGAGATTACACAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGTCGGGCACAAGATGATTAATCGCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgat                                                                                                               <  1:195601‑M1/150‑41 (MQ=255)
                                         tGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggcgatt                                                                                                              <  2:1006018‑M2/150‑11 (MQ=255)
                                          tgtagctgattgaactgctggatttctttctgtgagcgttgatgcaactcggaagcttgcgaaaaaatcataaacgccagcacgctaagcattgagaaAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGAttt                                                                                                             >  2:205150‑M1/99‑150 (MQ=255)
                                           gAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGAtttt                                                                                                            >  2:190902/1‑150 (MQ=255)
                                              gctgattgacctgctggatttctttctgtgagcgttgatgcaactcggaagcgtgcgaaaaaatcataaacgccagcacgctaagcattgagaaAATCGCCAGCAGGGTTTCACAATGCTGGAGGTCATGGCGGCGCTGGCGATTTtctc                                                                                                         >  1:622935‑M1/95‑150 (MQ=255)
                                              cGCCCCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAACTCCGGGCAGGCACAAGATGATTAATCGCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatca                                                                                                         <  1:1002641‑M1/150‑47 (MQ=255)
                                                cACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGa                                                                                                                                    >  1:352595/1‑121 (MQ=255)
                                                cACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGa                                                                                                                                    <  2:352595/121‑1 (MQ=255)
                                                cACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCaa                                                                                                       >  1:584340/1‑150 (MQ=255)
                                                cACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCaa                                                                                                       >  1:732128/1‑150 (MQ=255)
                                                cACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAAT‑‑‑‑‑‑gccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctg                                                                                                  <  1:596195‑M1/150‑55 (MQ=255)
                                                cACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAAT‑‑‑‑‑‑gccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctg                                                                                                  <  1:741968‑M1/150‑55 (MQ=255)
                                                 aCCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTAATGGCGGAGCTGGCGATTTTCTCAAt                                                                                                      >  1:1335396/1‑150 (MQ=255)
                                                   cATATCGGTGACATTACCCAGGGGTCAGACAACCTCGCTTAAGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGTTGATTTATCGCCAGAAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTGAATGc                                                                                                    <  2:295043/150‑1 (MQ=255)
                                                          gTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGt                                                                                             >  1:1024521/1‑150 (MQ=255)
                                                          gTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGt                                                                                             >  2:561187/1‑150 (MQ=255)
                                                            gACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGc                                                                                           >  1:1197966/1‑150 (MQ=255)
                                                              cATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTg                                                                                         <  1:1287560/150‑1 (MQ=255)
                                                                ttACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGc                                                                                       >  1:920562/1‑150 (MQ=255)
                                                                 tACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCg                                                                                      >  2:572759/1‑150 (MQ=255)
                                                                    ccAGCGGTCAGACACCCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCCATGCTGAGCGTGCTGGCGgtt                                                                                   >  1:125611/1‑150 (MQ=255)
                                                                      aGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTAt                                                                                 <  2:1197966/150‑1 (MQ=255)
                                                                         ggTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGAt                                                                              >  2:518924/1‑150 (MQ=255)
                                                                             agccAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGAttttt                                                                          >  1:1073438/4‑150 (MQ=255)
                                                                              gACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTAt                                                                                 <  2:499410/142‑1 (MQ=255)
                                                                                cAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCg                                                                       <  1:867808/150‑1 (MQ=255)
                                                                                cAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCg                                                                       <  2:805600/150‑1 (MQ=255)
                                                                                 aaCCTCGCTTACGCGGTATCAAAGCATCGATAATAAATCCGGCCAGGCACAAGATGATTAATCGACAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGc                                                                      <  2:87690/150‑1 (MQ=255)
                                                                                   ccTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttataatcgatgctttgat                                                                    <  2:47903‑M1/150‑84 (MQ=255)
                                                                                     tCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGc                                                                  >  1:1045967/1‑150 (MQ=255)
                                                                                          tACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCg                                                             <  1:1087969/150‑1 (MQ=255)
                                                                                              cgTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGtt                                                         >  1:1500091/1‑150 (MQ=255)
                                                                                               gTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTg                                                        <  1:1006018/150‑1 (MQ=255)
                                                                                               gTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTg                                                        <  2:732128/150‑1 (MQ=255)
                                                                                                ttATCAAAGCATCGATAATAAATCCGGGCAGGCACCAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGc                                                       <  1:197933/150‑1 (MQ=255)
                                                                                                  aTCAAAGCATCGATTATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgagg                                                     <  2:47903‑M2/150‑68 (MQ=255)
                                                                                                   tCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCAAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGAGTTTTTCGCAAGCTTCCGAGTTGCAta                                                    >  1:1092204/1‑149 (MQ=255)
                                                                                                    cAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCa                                                   <  2:1470249/150‑1 (MQ=255)
                                                                                                     aaaGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCaa                                                  >  1:652940/1‑150 (MQ=255)
                                                                                                      aaGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAAc                                                 >  2:506191/1‑150 (MQ=255)
                                                                                                      aaGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTCGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAAc                                                 <  1:439552/150‑1 (MQ=255)
                                                                                                       aGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACg                                                >  1:814098/1‑150 (MQ=255)
                                                                                                        tcATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTAACATTGCTGGAGGTCATGGAGGCGCTGGCGATTTTCTCAATGCTTAGCTTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGc                                               <  2:1089199/149‑1 (MQ=255)
                                                                                                        gCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGc                                               <  1:313731/150‑1 (MQ=255)
                                                                                                         cATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCt                                              >  1:205379/1‑150 (MQ=255)
                                                                                                            cGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTcac                                           >  1:786689/1‑150 (MQ=255)
                                                                                                             gATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTcaca                                          >  2:694647/1‑150 (MQ=255)
                                                                                                             gATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTcaca                                          <  2:1070344/150‑1 (MQ=255)
                                                                                                              ataattAATCCGGGCAGGGACAAGATGATTTATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGTTTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACag                                         <  2:898881/150‑1 (MQ=255)
                                                                                                                   aaaTCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACagaaaga                                    <  1:483143/150‑1 (MQ=255)
                                                                                                                   aaaTCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACagaaaga                                    <  2:894496/150‑1 (MQ=255)
                                                                                                                     aTCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAgaaagaaa                                  >  1:1553903/1‑150 (MQ=255)
                                                                                                                        cGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATGGCTGGAGGTCATGGCGGCGCTGGGGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATcc                               >  2:343407/1‑150 (MQ=255)
                                                                                                                           gcaggcaCAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCcagc                            <  1:1052159/150‑1 (MQ=255)
                                                                                                                            caggcaCAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCG‑ttaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtg                           <  1:741968‑M2/150‑95 (MQ=255)
                                                                                                                               gcaCAAGATGATTTATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTATCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGtt                        <  1:838392/150‑1 (MQ=255)
                                                                                                                               gcaCAAGATGATTAATCGCCAGCTGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGtt                        >  2:1634045/1‑150 (MQ=255)
                                                                                                                                    aGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATc                   <  2:584340/150‑1 (MQ=255)
                                                                                                                                       tgatTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggcgattaatcatcttgtgcctgcccggagttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggggcg                <  1:1002641‑M2/150‑105 (MQ=255)
                                                                                                                                        gatTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCt               <  2:786689/150‑1 (MQ=255)
                                                                                                                                         atTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTa              >  2:43269/1‑150 (MQ=255)
                                                                                                                                         atTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTa              <  1:750514/150‑1 (MQ=255)
                                                                                                                                            aaTCGCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttcca           <  2:1006018‑M1/150‑141 (MQ=255)
                                                                                                                                            AATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAg           <  2:1438049‑M1/150‑1 (MQ=255)
                                                                                                                                             aTCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCgctggcgattaatcatcttgtgcctgcccggatttattatcgattctttgataacgcgtaagagaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttccag          <  2:1063828‑M2/150‑111 (MQ=255)
                                                                                                                                              tCGCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttccaga         <  2:925105‑M1/150‑143 (MQ=255)
                                                                                                                                               CGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAgcgc        >  2:652940‑M1/1‑150 (MQ=255)
                                                                                                                                                gCCAGCgccgccatgccctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttccagaag       >  1:737114‑M1/1‑6 (MQ=255)
                                                                                                                                                gCCAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgccctgatttattatcgattctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgagttccagaag       >  2:1120104‑M1/1‑6 (MQ=255)
                                                                                                                                                GCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCa       >  2:1073437‑M1/1‑150 (MQ=255)
                                                                                                                                                GCCAGCAGGGTTTCACATTGCTGGAGGGCATGGCGGCGCTGGCCATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCa       >  2:1073438‑M1/1‑150 (MQ=255)
                                                                                                                                                 ccAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttccagaagc      >  2:1547411‑M1/1‑5 (MQ=255)
                                                                                                                                                  cAGCgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttccagaagcg     <  2:750514‑M1/150‑147 (MQ=255)
                                                                                                                                                    gcgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtctgaccgctgggtaatgtcaccgttatggtgcgttccagaagcgtg   <  1:793652‑M1/150‑149 (MQ=255)
                                                                                                                                                    gcgccgccatgacctccagcaatgtgaaaccctgctggcgattaatcatcttgtgcctgcccggatttattatcgatgctttgataacgcgtaagcgaggttgtccgaccgctgggtaatgtcaccgttatggtgcgttccagaagcgtg   >  2:1469890‑M1/1‑2 (MQ=255)
                                                                                                                                                     CAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCACCATc  >  1:602497‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCACCATC  >  NC_000913/3462210‑3462508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.