New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	270109 =	59 (0.770)	4 (0.060)	4/262	NT	6.7%	coding (74/894 nt)	perR	CP4‑6 prophage; putative DNA‑binding transcriptional regulator
	?	NC_000913	270171 =	NA (NA)					coding (12/894 nt)	perR	CP4‑6 prophage; putative DNA‑binding transcriptional regulator

AAAGGCGTACATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCC  >  NC_000913/270023‑270319                                                                                                                                                     |                                                                                                                                                     aggtgagcatatcacctctgttcaggtggccaaattcagtaaaccacttcatccctagtgaaaaggattcatgaatgaagctcttaGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTa                                                                                                                                                     >  2:367129‑M1/87‑150 (MQ=255) aaaGGCGTACATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCGTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTa                                                                                                                                                     >  1:296118/1‑150 (MQ=255)  aaGGCGTACATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTaa                                                                                                                                                    >  1:434150/1‑150 (MQ=255)   gtgagcatatcacctctgttcaggtggccaaattcagtaaaccacttcatccctagtgaaaaggattcatgaatgaagctcttaGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAag                                                                                                                                                   >  2:349940‑M1/85‑150 (MQ=255)    tgagcatatcacctctgttcaggtggccaaattcagtaaaccacttcatccctagtgaaaaggattcatgaatgaagctcttaGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAaga                                                                                                                                                  >  1:709027‑M1/84‑150 (MQ=255)     gagcatatcacctccgttcaggtggccaaattcagtataccacttcatccctagtgaaaaggattcatgaatgaagcgcttaGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAagag                                                                                                                                                 >  2:323153‑M1/83‑150 (MQ=255)     gCGTACATCAAGCAAGTTTTCCAGTTTGCGGAGGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAagag                                                                                                                                                 <  1:1069893/150‑1 (MQ=255)      cGTACATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGc                                                                                                                                                <  1:198379/150‑1 (MQ=255)      cGTACATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGc                                                                                                                                                >  1:1290191/1‑150 (MQ=255)          cATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCttca                                                                                                                                            >  2:753201/1‑150 (MQ=255)           aTCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCATAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGGttcat                                                                                                                                           <  1:312844/150‑1 (MQ=255)            tCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCttcatt                                                                                                                                          <  2:98786/150‑1 (MQ=255)               agcaagTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTtcattcat                                                                                                                                       >  1:456336/1‑150 (MQ=255)                gctaggtttACAGTTTGCGGATGGGATGGCTGATCGCACTTGGTCACAGTTCCAACTCAGAGGCGGCCATCGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGTGGTGCTTTTGCTAAGAGCTTCATTCATg                                                                                                                                      <  2:816097/144‑1 (MQ=255)                gctagTTATCCAGTTTGCGGATGGCATGGCTGATCGCTGTGGGTGACAGTTCCAACTCTGAGGGGGCCAAGGCTTAAGCTCCGGTACGTCCTGCCGCTTGATAGGCGCGTAACAGTTTTAGAGGTGCTTTTGCTATGAGCTTCATTCATg                                                                                                                                      <  1:678946/147‑1 (MQ=255)                  aagTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGaa                                                                                                                                    >  2:1066587/1‑150 (MQ=255)                   agTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACATTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAAt                                                                                                                                   <  2:1243855/150‑1 (MQ=255)                          cAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTc                                                                                                                            <  1:395769/150‑1 (MQ=255)                               tGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAg                                                                                                                       >  1:464989/1‑150 (MQ=255)                                gCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAAGAGATTTAGAGGTGCTTTTGCTAAGAGCTTCAGTCATGAATCCTTTTCACTAgg                                                                                                                      >  1:1221463/1‑150 (MQ=255)                                    atggcatggcTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATg                                                                                                                  <  2:989299/150‑1 (MQ=255)                                       gcatggcTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTGTTCACTAgggtgtaag                                                                                                               >  2:1309271/1‑144 (MQ=255)                                         atggcTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTg                                                                                                             <  1:1005600/150‑1 (MQ=255)                                             cTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTTCGACCAGCCGCTTCAACGGCGCGTAACAGATTTCAAGGTGGTTTGACTAATAGATTCATTAATTATTCATTTTCCGTCGGGAGGAAGTGGttt                                                                                                         >  2:188493/1‑150 (MQ=255)                                                   gCACTGGGTGAGAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGaa                                                                                                   <  2:300383/150‑1 (MQ=255)                                                        gggTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTgg                                                                                              <  2:133375/150‑1 (MQ=255)                                                         ggTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGc                                                                                             >  2:330959/1‑150 (MQ=255)                                                          gTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACGGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGcc                                                                                            >  2:987473/1‑150 (MQ=255)                                                              cAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCAcag                                                                                        >  2:444728/1‑148 (MQ=255)                                                              cAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCt                                                                                        >  1:461757/1‑150 (MQ=255)                                                               aGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTg                                                                                       >  1:750726/1‑150 (MQ=255)                                                                gTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGTTGAAGTGGTTTACTGAATTTGGCCACCTGa                                                                                      >  1:781903/1‑150 (MQ=255)                                                                  tCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAAc                                                                                    >  1:1120271/1‑150 (MQ=255)                                                                   ccAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACa                                                                                   >  1:1316956/1‑150 (MQ=255)                                                                       cTCAGAGGCGGCCATCGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTAATGAATTTGGCCACCTGAACAGAgg                                                                               >  2:1218888/1‑150 (MQ=255)                                                                       cTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTTGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAgg                                                                               >  2:504202/1‑150 (MQ=255)                                                                        tCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGt                                                                              <  1:244483/150‑1 (MQ=255)                                                                          agagGCTGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTGTACTGAATTTGGCCACCTGAACAGAGGTGa                                                                            <  2:651286/150‑1 (MQ=255)                                                                          agagGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACCGAGGTGa                                                                            <  1:661337/150‑1 (MQ=255)                                                                               cggcCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGc                                                                       <  2:759808/150‑1 (MQ=255)                                                                                 ctcttagcaaaagcacctctaaatctgttacgcgcctttgaagcggctggtcgtaccggagcttttgcTAAGCGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTATACTGAATTTGGCCACCTGAACGGAGGTGATATGCTc                                                                     >  2:323153‑M2/69‑150 (MQ=255)                                                                                  tcttagcaaaagcacctctaaatctgttacgcgcctttgaagcggctggtcgtaccggagcttttgcTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCa                                                                    >  1:709027‑M2/68‑150 (MQ=255)                                                                                   cttagcaaaagcacctctaaatctgttacgcgcctttgaagcggctggtcgtaccggagcttttgcTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCAc                                                                   >  2:349940‑M2/67‑150 (MQ=255)                                                                                   cAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCAc                                                                   >  1:762947/1‑150 (MQ=255)                                                                                    aaCGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGCTTTAGAGCTGCATTAGCTAAGAGCTTCATTCATGAATCCTTTTCACTAAGGAAGAAGTGGTATACTGAATTTGGCCACCTGAACAGAGGTGATATCCTCAcc                                                                  >  2:1137677/1‑150 (MQ=38)                                                                                     tagcaaaagcacctctaaatctgttacgcgcctttgaagcggctggtcgtaccggagcttttgcTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCt                                                                 >  2:367129‑M2/65‑150 (MQ=255)                                                                                      cGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                                                <  1:511633/150‑1 (MQ=255)                                                                                        aAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAg                                                              >  2:497152‑M1/2‑150 (MQ=255)                                                                                        CAAAAGCTCCGTTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGATAAGAGCTTCATTCATAAATCCTTTTCACTAGGGATGATGTGGGTTACTGAATTTGGACACCTGAACATAGGTGATATGCTCACCTCAg                                                              <  2:1266191‑M1/150‑1 (MQ=255)                                                                                        CAAAAGCACCGGAACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTATTCACAAGGTATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAg                                                              <  2:481549‑M1/150‑1 (MQ=255)                                                                                            AGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaaca                                                          <  2:522651‑M1/150‑1 (MQ=255)                                                                                             GCTCCGGTACGACCAACCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaa                                                         <  2:273473‑M1/150‑1 (MQ=255)                                                                                              CTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTGACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATAAGCTCACCTCAGaacaac                                                        <  2:114819‑M1/150‑1 (MQ=255)                                                                                              CTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaac                                                        <  2:957701‑M1/150‑1 (MQ=255)                                                                                                 cgttACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTAATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAAcaca                                                     <  2:979012/147‑1 (MQ=255)                                                                                                  ggTTCGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAg                                                    <  1:1297553/150‑1 (MQ=255)                                                                                                    tACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgt                                                  >  2:185613/1‑150 (MQ=255)                                                                                                        aCCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCa                                              >  2:391097/1‑150 (MQ=255)                                                                                                         ccAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGGGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCAt                                             <  1:941812/150‑1 (MQ=255)                                                                                                          cAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATa                                            <  1:710002/150‑1 (MQ=255)                                                                                                             ccGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATg                                         <  2:174105/150‑1 (MQ=255)                                                                                                              cGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGa                                        <  2:1316956/150‑1 (MQ=255)                                                                                                              cGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGa                                        <  1:889244/150‑1 (MQ=255)                                                                                                              cGCATCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGa                                        >  1:156992/1‑150 (MQ=255)                                                                                                               gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaa                                       >  2:774201/1‑150 (MQ=255)                                                                                                               gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaa                                       >  2:1277985/1‑150 (MQ=255)                                                                                                                   cAAAGGCGCGTAACAGATTTAGATGAGCTTTTGCTAAGAGCTTAAAAAATGAATCCTTTTCACGAGGGATGAAGTGTAATACAGAATATGGCCACATGATCAGAGGTGATATGCTCACAGCAGAACAACACACGTGTCATAATGaaaaaa                                   >  2:100077/1‑150 (MQ=255)                                                                                                                   cAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaaaa                                   >  1:205255/1‑150 (MQ=255)                                                                                                                      aGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGa                                <  2:456336/150‑1 (MQ=255)                                                                                                                         cgcgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAAt                             <  2:961877/150‑1 (MQ=255)                                                                                                                           cgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAAttt                           <  2:423064/150‑1 (MQ=255)                                                                                                                             tAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCa                         >  2:426547/1‑150 (MQ=255)                                                                                                                               aCAGATTTAGAGGTTCTTTTGCTAAGAGCTTCATTCATTAATACTTTTCACTAGGGATGAAGTGTTATACTGAATTTCGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAgc                       <  1:206390/150‑1 (MQ=25)                                                                                                                                  taTTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCa                    <  2:475678/149‑1 (MQ=255)                                                                                                                                     ttAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCagag                 <  2:1290191/150‑1 (MQ=255)                                                                                                                                       tgagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGtt               <  1:380553/149‑1 (MQ=255)                                                                                                                                        gagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGttt              >  1:807562/1‑150 (MQ=255)                                                                                                                                        gagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGttt              >  1:1277762/1‑150 (MQ=255)                                                                                                                                        gagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTAACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGttt              >  1:994948/1‑150 (MQ=255)                                                                                                                                         agGTGCTTTTGCTAAGAGCTTAATTCATGATTCCTTTTCACTAGGGATTAAGTGGTTTACTGAATTTGGCCACCTGAACATAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTa             <  1:1218888/150‑1 (MQ=255)                                                                                                                                          ggTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACATGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTaa            >  2:1061088/1‑150 (MQ=255)                                                                                                                                             gcttttgcTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAAcg         <  1:1167425‑M2/142‑1 (MQ=255)                                                                                                                                               ttttgcTAAGAGCTTCATTCTTGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATTATGAAAACAAGAAATTTCAGCGCAGAGTTTAAAcgcg       <  2:1237218‑M2/144‑1 (MQ=255)                                                                                                                                               ttttgcTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAAcgcg       >  2:937841‑M2/7‑150 (MQ=255)                                                                                                                                                   gcTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTTCTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGTTGTCATAATGAAAAAAAGAAATTTCAGAGCAGAGTTTAAACGCGAATc   >  1:68270‑M2/3‑150 (MQ=255)                                                                                                                                                    cTAATAGCTTCATTCATGAATCCTTTTCCCTAGGGATGAAGGGGTTTACTGAATTTGGCCACCTGAACATAGGTGATATCCACACCTCTGAACAACACAGGTGTCATAATCAAAAAACGAAATTTCAGCGCAGAGTTAAAACGCGAATcc  <  2:590618/150‑1 (MQ=21)                                                                                                                                                    cTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGTTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGGTTAATCGCGAATcc  >  1:1064760‑M2/2‑150 (MQ=255)                                                                                                                                                    cTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAAtct  <  2:1115809‑M2/149‑2 (MQ=255)                                                                                                                                                    cTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATcc  >  2:1002347‑M2/2‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AAAGGCGTACATCAAGCAAGTTTTCCAGTTTGCGGATGGCATGGCTGATCGCACTGGGTGACAGTTCCAACTCAGAGGCGGCCAACGCAAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCC  >  NC_000913/270023‑270319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.