New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 105098694 (0.800)5 (0.050) 5/262 NT 5.3% coding (190/213 nt) cspH stress protein, member of the CspA‑family
?NC_000913 = 1051010 89 (0.800)coding (166/213 nt) cspH stress protein, member of the CspA‑family

AACTATTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050830‑1050986
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgccgcGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAATATGACGCTGCTTGTTTAAAGCTGACTGGTTTTATTGGAATAGTGAAATAGTCAACATCATACATTATAACATCAGTTACTTTTCCACAAAGAAACTAATC  <  NC_000913/1051010‑1050862
                                                                                                                                                                                                                                                                                                                  
AACTATTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACAT                                                                                                                                                              >  2:302739/1‑150
   TATTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTAATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTG                                                                                                                                                           <  2:1516006/150‑1
    ATTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGC                                                                                                                                                          <  1:1326533/150‑1
    ATTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGC                                                                                                                                                          >  2:1667631/1‑150
     TTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCC                                                                                                                                                         <  1:644559/150‑1
           GCAGAGATATTCGCTTAAATGGTTTAGTTTCTTTGTGGACAAGTAACTGATGTTATTATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTATACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCtctttt                                                                                                                                                   <  2:1444205/150‑7
                                     GTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCA                                                                                                                         >  2:54678/1‑150
                                     GTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGGCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCA                                                                                                                         <  1:109667/150‑1
                                       TTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCAAA                                                                                                                       <  1:226301/150‑1
                                           TTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTT                                                                                                                   <  1:290249/150‑1
                                                 AAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGCGTAAATGGCCTGCGAGGACCAACCGCGGCAAATGTTTATCTC                                                                                                             <  1:54678/150‑1
                                                                                                                                                      TTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAATATGCCGCTGCTTGTTTAAAGCGGAGTGGTTTTATTGGATTAGTGAAATAGTCACCATCATACTTTATTACTTCTGTTACTTTTCCTCTAAGAAA        >  2:351146/1‑150
                                                                                                                                                        gactCGTAAATGGCCTTCGAGGACAAACAGAGGCAAATGTTTATCTCTCTTAATATGACGCTGATTTTTTAAAGCTGACTGTTTTTATTGGAATAGTGAAATAGTCAACATCATACATTATAACATCAGTTACTTTTCCACAAAGAAACT      <  1:368791/146‑1
                                                                                                                                                           GCGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAATATGACGCTGCTTGTTTAAAGCTGACTGGTTTTATTGGAATAGTGAAATAGTCAACATCATACATTATAACATCAGTTACTTTTCCACAAAGAAACTAAT   <  1:1909188/150‑1
                                                                                                                                                           GCGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAATATGACGCTGCTTGTTTAAAGCTGACTGGTTTTATTGGAATAGTGAAATAGTCAACATCATACATTATAACATCAGTTACTTTTCCACAAAGAAACTAAT   <  1:705570/150‑1
                                                                                                                                                            CGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAATATGACGCTGCTTGTTTAAAGCTGACTGGTTTTATTGGAATAGTGAAATAGTCAACATCATACATTATAACATCAGTTACTTTTCCACAAAGAAACTAATC  >  1:1977831/1‑150
                                                                                                                                                                                                                                                                                                                  
AACTATTAGGTGCAGAGATATTCGCTTAAATGGATTAGTTTCTTTGTGGAAAAGTAACTGATGTTATAATGTATGATGTTGACTATTTCACTATTCCAATAAAACCAGTCAGCTTTAAACAAGCAGCGTCATATTAAGAGAGATAAACATTTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050830‑1050986
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgccgcGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAATATGACGCTGCTTGTTTAAAGCTGACTGGTTTTATTGGAATAGTGAAATAGTCAACATCATACATTATAACATCAGTTACTTTTCCACAAAGAAACTAATC  <  NC_000913/1051010‑1050862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.