Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,292,997 IS2 (–) +5 bp 100% intergenic (‑75/‑526) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1292997 =4 (0.040)93 (0.850) 82/278 NT 95.7% intergenic (‑75/‑530) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1469240 NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 12930014 (0.040)71 (0.650) 56/278 NT 94.5% intergenic (‑79/‑526) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 1467910 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 102 total aligned reads displayed.

GACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293145‑1292997
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCG  <  NC_000913/1469240‑1469092
                                                                                                                                                                                                                                                                                                          
GACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCCAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGT                                                                                                                                                      >  2:433000/1‑150
GACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGAGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGT                                                                                                                                                      >  1:1319042/1‑150
  CATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTTTAAATATGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAG                                                                                                                                                    <  1:1134738/150‑1
  CATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAt                                                                                                                                                    >  1:371100/1‑149
     GAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTGGTTTCTGGCTAAGTTTATGAAAAGATATTTATTGGCGGCTCAAAATAAAGACCAATTTTGAATTCCTTACATTACTGGTAGACT                                                                                                                                                 >  2:1514078/1‑150
      AATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCATGGTAGACTG                                                                                                                                                >  1:127739/1‑150
       ATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGG                                                                                                                                               >  1:985902/1‑150
        TCAGGAAGTTTTAACCTGACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGC                                                                                                                                              <  1:578179/150‑1
         CAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCC                                                                                                                                             >  2:1047041/1‑150
          AGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCC                                                                                                                                            >  2:1484103/1‑150
            GAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCC                                                                                                                                          <  2:919056/150‑1
            GAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGAAATTTATTGGAGGCACAAAATAAATAACAATTTTGAATTCATTACATTCCTGGTAGACTGGCCCCC                                                                                                                                          >  1:120817/1‑150
             AAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGATCAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCT                                                                                                                                         <  2:220308/150‑1
               GTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGA                                                                                                                                       >  1:1198242/1‑150
                 TTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAAT                                                                                                                                     <  1:673089/150‑1
                  TTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATTAAGGACAATTTTGAATTCCTTAAATTCCTGGTAGACTGGCGCCCTGAATa                                                                                                                                    >  2:694221/1‑149
                  TTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGGCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCACCCTGAATC                                                                                                                                    <  2:1469586/150‑1
                   TAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTATTTTCTGGCGAATTTTAGGAAAAGCTATTTATTGGGGGCACAAAATAAAGAAAAATTTTGAATTCATTGCCTTCCTGGTAGACTGTCCAACTAAATCT                                                                                                                                   >  2:297614/1‑150
                     ACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCC                                                                                                                                 <  1:1169555/150‑1
                     ACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCC                                                                                                                                 <  1:700711/150‑1
                      CCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCA                                                                                                                                <  1:867945/150‑1
                       CTCACGGGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATAATTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAG                                                                                                                               <  2:1508128/150‑1
                        TCACGTGCTGCGAAAACATCGGGGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGACCAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGA                                                                                                                              <  2:1357063/150‑1
                           CGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGCCAA                                                                                                                           >  2:1027775/1‑150
                            GTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCAGAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAAC                                                                                                                          >  2:659516/1‑150
                               CTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAG                                                                                                                               <  2:1868889/142‑1
                               CTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAG                                                                                                                               >  1:1868889/1‑142
                                TGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAAT                                                                                                                      >  1:882990/1‑150
                                 GCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCTGAATCTCCAGACAACCAATAT                                                                                                                    >  1:847714/1‑150
                                     AATCATCGGTGTAAATAGTGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAC                                                                                                                 <  2:1297432/150‑1
                                     AATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAC                                                                                                                 <  2:1469007/150‑1
                                      ATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACT                                                                                                                <  2:1016550/150‑1
                                         ATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAA                                                                                                             >  1:950930/1‑150
                                         ATCGGTGTAAATACGGCTATATGCCGCGTCTTTTCTGGCTTATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAAATTTGAATTACTTACATACCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAATTAA                                                                                                             >  2:1334162/1‑150
                                            GGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATA                                                                                                          >  2:1250144/1‑150
                                            GGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATCGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATA                                                                                                          <  2:1539955/150‑1
                                                TAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTG                                                                                                      <  1:544664/150‑1
                                                 AAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGAGTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGA                                                                                                     >  1:1665882/1‑150
                                                     AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGT                                                                                                 <  2:1861043/150‑1
                                                      GGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTATTTAAGTGATAttg                                                                                                <  1:1018040/150‑4
                                                      GGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTC                                                                                                >  1:659046/1‑150
                                                      GGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTC                                                                                                >  1:546980/1‑150
                                                          TATATGCCGCGTCTTTTCTTGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGTACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAA                                                                                            <  2:354584/150‑1
                                                          TATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGCCAACCAATATCACTTAAATAAGTGATAGTCTTAA                                                                                            >  2:807195/1‑150
                                                           ATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTACTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAAT                                                                                           >  1:49399/1‑150
                                                            TATGCCGCGTCTTTTCTGTCTAATTTTATGAAAAGATATTTATTGGCGTAACAAAATAAATAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAATTGATAGTCTTAATA                                                                                          <  2:1225471/150‑1
                                                                CCGCGTCTTTTCTTGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG                                                                                      <  1:1277769/150‑1
                                                                CCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG                                                                                      >  1:1092943/1‑150
                                                                  GCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAAAAGAGATAGTCTAAATACTAGTT                                                                                    >  1:1038090/1‑150
                                                                    GTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                                  >  1:1077432/1‑150
                                                                     TCTTTTATGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAAAAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTT                                                                                 <  1:230770/150‑1
                                                                      CTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                                <  2:573986/150‑1
                                                                       TTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAG                                                                               <  1:1484103/150‑1
                                                                       TTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAG                                                                               >  1:321305/1‑150
                                                                         TTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGAC                                                                             <  2:52479/150‑1
                                                                           CTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTA                                                                           >  1:789006/1‑150
                                                                           CTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTA                                                                           <  1:1284035/150‑1
                                                                             GGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGT                                                                         >  1:871686/1‑150
                                                                              GCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTC                                                                        >  1:1031638/1‑150
                                                                               CTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCA                                                                       >  1:997288/1‑150
                                                                                  ATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTACTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTG                                                                    >  1:1421625/1‑150
                                                                                  ATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTACTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTAAAATAAGTGATAGTCTTAATACTATTTTTTAGACTAGTCATTG                                                                    >  1:444259/1‑150
                                                                                     TTATTAAAAGATATTTTTTGGCGGCAAAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAG                                                                 <  1:664008/150‑1
                                                                                      TATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGA                                                                <  2:1477082/150‑1
                                                                                       ATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGCCAACCAATATCACTTTAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAA                                                               >  2:1188034/1‑150
                                                                                        TGAAAAGATATTTATTGGCGGCACAAAAAAATGAACAATTTTGAATTCCTTACATTCATCGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGAGATAGTCTTAATACTAGTTTTTAGACTAGTCATTTGATAAC                                                              >  2:911957/1‑150
                                                                                         GAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACA                                                             >  1:1855366/1‑150
                                                                                          AAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAG                                                            <  2:952681/150‑1
                                                                                          AAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAG                                                            <  2:1602885/150‑1
                                                                                                TATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATT                                                      >  2:871569/1‑150
                                                                                                  TTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGACCCCCTGAATCTCCAGACAACCAATATCACGTAAATAAGTGATAGGCTTAATACTAGGATTTAGACATGTCATTCGAGAACAGATGATTGA                                                    >  2:311009/1‑150
                                                                                                   TTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGtt                                                   >  2:1767875/1‑148
                                                                                                    TATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATG                                                  <  1:1369520/150‑1
                                                                                                        GGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGCCTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTT                                              >  1:1211802/1‑150
                                                                                                         gctGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTTGCCCCCTGAATCTCCAGACAACCAATATCACTTCAATAAGTGATAGGCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTA                                             <  2:1157093/147‑1
                                                                                                          CGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAG                                            <  2:508913/150‑1
                                                                                                           GGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGG                                           <  2:659046/150‑1
                                                                                                            GCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATGGGAGAACAGATGATTGATGTCTTAGGG                                          >  1:705759/1‑150
                                                                                                             CACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGAAAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGC                                         >  1:765643/1‑150
                                                                                                                AAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGG                                      <  2:388646/150‑1
                                                                                                                 AAATAAAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                                     <  1:602524/150‑1
                                                                                                                 AAATAAAGAAAAATTTTTAATTCCTTACATTCCTGTTATACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCATAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATTTCTTAGGGCCGGA                                     <  1:1318014/150‑1
                                                                                                                      AAGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGGCTTAGGGCCGGAGAAAC                                <  1:418413/150‑1
                                                                                                                       AGAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACG                               <  2:157391/150‑1
                                                                                                                        GAACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAAACTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGC                              >  2:472024/1‑150
                                                                                                                          ACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGTGCCGGAGAAACGCAG                            >  1:1269170/1‑150
                                                                                                                          ACAATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAG                            <  1:1405907/150‑1
                                                                                                                             ATTTTGAATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGTAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG                         >  1:420064/1‑150
                                                                                                                                   AATTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGTCGGCGTAC                   <  1:433000/150‑1
                                                                                                                                    ATTCCTTACATTCATGGTATACTGGCCCCCTGAATCTACAGACAACCAAGATCACTTAACTACGTGATAGGCTTCATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACC                  <  1:297614/150‑1
                                                                                                                                     TTCCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCA                 <  2:950930/150‑1
                                                                                                                                       CCTTACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA               >  1:1048970/1‑150
                                                                                                                                          TACATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGTACAGATGATTGATGTCTTAGGGCCGGAGAAACACAGACGGCGTACCACACAG            >  1:794866/1‑150
                                                                                                                                            CATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTTCCACACAGGA          >  1:656743/1‑150
                                                                                                                                            CATTCCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGA          <  1:1338960/150‑1
                                                                                                                                                CCTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAG      <  2:1319042/150‑1
                                                                                                                                                CCTGGTAGACTGGCCCCCAGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTATTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGTAACGCAGACGGCGTACCACACAGGAAAAG      <  1:694221/150‑1
                                                                                                                                                 CTGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGA     >  1:1300077/1‑150
                                                                                                                                                  TGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGATTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGAT    >  1:1826320/1‑150
                                                                                                                                                    GTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGACGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCG  <  2:1755970/150‑1
                                                                                                                                                                                                                                                                                                          
GACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293145‑1292997
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCG  <  NC_000913/1469240‑1469092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.