| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 2,392,615 | Δ3 bp | 33.9% | coding (425‑427/1530 nt) | nuoM ← | NADH:quinone oxidoreductase subunit M |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2392618 = | 29 (0.690) | 13 (0.330) | 12/244 | NT | 33.9% | coding (424/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M |
| ? | NC_000913 | = 2392614 | 24 (0.620) | coding (428/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M | |||||
GTGCTGACCGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2392768‑2392618‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcttcttctGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGATTGCCATCCT < NC_000913/2392614‑2392473 GTGCTGACCGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTACCGGCGTGTTCCTTGCCGTCGCCATGTTACTGTT > 1:168010/1‑143 CGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCT < 1:437784/143‑1 CGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGACGTTATCGGCGTGTTCCTTGCCACCGACATGTTCCTATCCCTCTTCT > 2:22512/1‑143 GTGCTGGCGGTCCTATGTTCGTGGAAAGCGATCGAAAAATATCAGGGCGTCTTCCCCCTCAACCTGATGTGGAGCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCT < 2:601483/143‑1 GGCGGTACTATGTTCGTGGAAAGCGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGC < 1:555786/143‑1 GAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGCTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGACATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGG > 2:349835/1‑143 AAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGGTGCTGGTGCCGCCGTACTTCCTGCTCGCACTGTGGGGG > 2:478687/1‑143 GGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTC < 1:629908/143‑1 CACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAA < 1:758830/143‑1 AACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGTACTGTGGGGGCATAAAGCCTCGGACGGTAAAACGCG > 2:184960/1‑143 AACCTGATGTGGATCCTGGGCGGCGTTATCGCCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCCTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATCAAGCCTCTGACGGTAACACGCG > 2:180880/1‑143 CTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTAT < 1:701354/143‑1 GCGTGATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTC < 1:477232/143‑1 CTTGCCATCGACATGTTCCTGATCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGAACTGTGGGGGCATAAAGACTCTGACGGTAAAACGCGTATAACGGCGGCAACCAAGTACTTAATTGACACCCAGGC > 2:115251/1‑143 TTGCCATCGACATGTTCCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGAGGCAACCAAGATCTTAATTTACACCCAGGCG > 1:162043/1‑143 acgTGTTCCTGTTCTTCTCCTGGGACATGACGCTGGCGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTG < 2:420790/140‑1 CCTGTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGCCGGTAAACCGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGCCGAGCAGCCTGGTGCTGT > 2:47913/1‑143 TTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCTGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGAT < 1:291441/143‑1 TTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGCTGTTGATTtc > 2:85755/1‑141 TCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGATTGCCATC > 1:527203/1‑143 CTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGCTTGCCggcc > 1:625396/1‑139 TGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTCCTTCATTTACACCCAGGCGAGTGGCCTGGTGGTGTTGATTGCCATCCT > 2:439037/1‑143 GTGCTGACCGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2392768‑2392618‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcttcttctGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGATTGCCATCCT < NC_000913/2392614‑2392473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |