| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 2,392,615 | Δ3 bp | 33.9% | coding (425‑427/1530 nt) | nuoM ← | NADH:quinone oxidoreductase subunit M |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2392618 = | 29 (0.690) | 13 (0.330) | 12/244 | NT | 33.9% | coding (424/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M |
| ? | NC_000913 | = 2392614 | 24 (0.620) | coding (428/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M | |||||
ATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACATAGTACCGCCAGCACACCGAGCAGACCG > NC_000913/2392476‑2392760 | aggatggcaatcaacaccaccaggccactcgcctgggtgtaaatgaaggacttggttgccgccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttccca > 2:439037‑M1/143‑143 (MQ=255) ggccggcaagcaacatcaccaggccactcgcctgggtgtaaatgaagaacttggttgccgccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccag > 1:625396‑M1/142‑143 (MQ=255) gatggcaatcaacatcaccaggccactcgcctgggtgtaaatgaagaacttggttgccgccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccaga > 1:527203‑M1/141‑143 (MQ=255) gaaatcaacagcaccaggccactcgcctgggtgtaaatgaagaacttggttgccgccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccagaagaa > 2:85755‑M1/137‑143 (MQ=255) tCAACATCACCAGGCCTCTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCagaagaagaag < 2:752018/143‑1 (MQ=255) cagcATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCagaagaagaaga < 2:355683/140‑1 (MQ=255) cAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCagaagaagaaga < 1:137372/143‑1 (MQ=255) atcaacatcaccaggccactcgcctgggtgtaaatgaagaacttggttgcagccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAgaagaagaa < 1:291441‑M1/10‑1 (MQ=255) aCATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAAc > 1:489266/1‑143 (MQ=255) acagcaccaggctgctcggctgggtgtaaatgaagaacttggttgccgccgtgatacgcggtttaccggcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAgg > 2:47913‑M1/130‑143 (MQ=255) cccAGGCGAGTGGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGATGGTATATGCCCACAGAGTGCGATCAGAAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAggca > 1:176102/2‑141 (MQ=255) ccAGGCTACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAAc < 1:728392/143‑1 (MQ=255) ccAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAAc < 2:74332/143‑1 (MQ=255) ggCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATg < 1:179828/143‑1 (MQ=255) caggccactcgcctgggtgtaaatgaagaacttggttgccgccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcgccagcgtcatgtcccAGGAGAAGAACAGGaacacgt < 2:420790‑M1/21‑4 (MQ=255) cgaCTCGCCTGGGTGTGAATGAGTAACTTGGAAGCAATTAGAATGCTCGGGTTACCGTCAGAGGCTTTAGGCCCCCGCAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTc < 2:799014/141‑1 (MQ=255) cACTAGCCTGGGTGTAAATGAAGAAGTTGGTTGAAGAAGTGATAAGCGTTGTAAAGTCAGAGGGTTTATGCGCCGACAGTGAGATAAGAAAGTACATCGGCAAGAGCATAATGTCGAAGAAGAAGAAGAAAAGGAAGAGGTCg > 2:255491/1‑143 (MQ=255) aCTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGa < 2:309251/143‑1 (MQ=255) cGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATgg < 1:142259/143‑1 (MQ=255) cgcctgggtgtaaattaagatcttggttgcctccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCaa > 1:162043‑M1/114‑143 (MQ=255) gcctgggtgtcaattaagtacttggttgccgccgttatacgcgttttaccgtcagagtctttatgcccccacagttcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGATCAGGAACATGTCGATGGCAAg > 2:115251‑M1/113‑143 (MQ=255) gtAAATGAAGAACTTGGTTGCCGCCGTGATACGAGAATGACCGACAGTGGCTTTGTGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCGGCAGAAGAAGAACAGGAACATGTCGATGGCACGGAaca > 1:646765/1‑143 (MQ=255) aaTGAAGAACTTGGTTGCCGACGTGATACTCGTTTTCACGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGc < 1:733801/143‑1 (MQ=255) tGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACAAGTCGAAGACAAGGAACACGCCg > 2:66357/1‑143 (MQ=255) aagaaCTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGAt > 2:526760/1‑143 (MQ=255) acggggTCGCCGCGGTGATACGCGGCGTAGCGTCAGAGGCTTCATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCGCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAAcg < 2:343338/139‑1 (MQ=255) gaacttggttgccgccgtgatacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATCAcgc < 1:477232‑M1/48‑1 (MQ=255) atacgcgttttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAg < 1:701354‑M1/67‑1 (MQ=255) cgcgttttaccgtccgaggctttatgcccccacagtacgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGtt > 2:184960‑M1/74‑143 (MQ=255) cgcgtgttaccgtcagaggcttgatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAGGAAGAACAGGAACATGTCGATGGCAAGGAACACGGCGATAACGCCGCCCAGGATCCACATCAGGtt > 2:180880‑M1/74‑143 (MQ=255) tACCGTCACAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGACCAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAgg < 1:610471/143‑1 (MQ=255) aCCGTCAGAGGCTTCAGGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGATCATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGt < 1:84157/143‑1 (MQ=255) ttaccgtcagaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTg < 1:758830‑M1/76‑1 (MQ=255) agagGCTTTATGCCCCCACAGTGCGATCAGGATGTAACTCGATACAGTCATCATTTCCCAGAAGAAGAAGTACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGgaaga < 1:184223/143‑1 (MQ=255) agagGCTTTATGCCCCCACAGTGCGAGCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAGGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGAACCACATCAGGCTGAGGTGgacga > 2:368555/1‑143 (MQ=255) gaggctttatgcccccacagtgcgatcaggaagtacatcggcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGcc < 1:629908‑M1/85‑1 (MQ=255) gtgaggCCCCCACAGTGCGATCAGGAAGTACAGCGGCACCAGCATCACTTCCCAGAAGAAGAAGAACAGGAGCATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCt < 2:641724/138‑1 (MQ=255) cccccacagtgcgagcaggaagtacggcggcaccagcaccatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATAttttt > 2:478687‑M1/48‑143 (MQ=255) ccACAGTGCGATCAGGAAGCACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATAttttt < 1:704479/143‑1 (MQ=255) ccccacagtgcgatcaggaagtacatcggcaccagcatcatgtcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAGCGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTc > 2:349835‑M1/47‑143 (MQ=255) tGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGAtct < 1:789729/143‑1 (MQ=255) atgAAGTACATCGTCACCAGCATCATTTCTCATAAGATGAAGAACTGGAACATGTCGATGGCAAGGAACACGCCGAGAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCa < 1:532159/141‑1 (MQ=255) ggtgcATGGGCACCAGCGTCATTTCCCAGAAGAAGAAGAACAGCAACATGTCGATGGCAAGGAGCACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGaa < 2:514950/139‑1 (MQ=255) agcacacCGGCACCAGCTTCATTTCCCAGAAGAAGAAGAACAGCAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACCTCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGaa < 2:30756/140‑1 (MQ=255) cATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACATa < 1:526760/143‑1 (MQ=255) gcaccagcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCGCTTTCCACGAACATAGTACCGcc < 1:555786‑M1/125‑1 (MQ=255) agcatcatttcccAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGCTCCACATCAGGTTGAGGGGGAAGACGCCCTGATATTTTTCGATCGCTTTCCACGAACATAGGACCGCCAGcac < 2:601483‑M1/130‑1 (MQ=255) ttccccAGTAGATGAAGAAAAGTGACCTGTGGATGGCAAAGAACTCGCTGATAACGCCGCCCAGAATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATGTTTCGATCTCTTTCCACGAACATAGTACCGCCAGCACACCg < 2:478184/140‑1 (MQ=255) agaagaagaagaACAGGAACAGGTCGATGGCAAGGAACACGCCGATAACGCCGCGCAGGATCCACATCAGGTTGAGGGGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACATAGTACCGCCACCACACCGAGCCGa > 1:176192/1‑143 (MQ=255) gaagaagaagaaCAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGGTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGCACAACGTACCGCCAGCACACCGAGcgcac > 1:332351/1‑139 (MQ=255) AGAAGAGGGATAGGAACATGTCGGTGGCAAGGAACACGCCGATAACGTCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACATAGTACCGCCAGCACACCGAGCAGACCg > 2:22512‑M1/1‑143 (MQ=255) AGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACATAGTACCGCCAGCACACCGAGCAGACCg < 1:437784‑M1/143‑1 (MQ=255) | ATGGCAATCAACATCACCAGGCCACTCGCCTGGGTGTAAATGAAGAACTTGGTTGCCGCCGTGATACGCGTTTTACCGTCAGAGGCTTTATGCCCCCACAGTGCGATCAGGAAGTACATCGGCACCAGCATCATTTCCCAGAAGAAGAAGAACAGGAACATGTCGATGGCAAGGAACACGCCGATAACGCCGCCCAGGATCCACATCAGGTTGAGGTGGAAGAAGCCCTGATATTTTTCGATCTCTTTCCACGAACATAGTACCGCCAGCACACCGAGCAGACCG > NC_000913/2392476‑2392760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |