New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3028494 =	49 (0.890)	4 (0.080)	4/246	NT	8.4%	intergenic (+6/+30)	ghxQ/ygfS	guanine/hypoxanthine transporter GhxQ/putative oxidoreductase, 4Fe‑4S ferredoxin‑type subunit
	?	NC_000913	3028518 =	42 (0.820)					intergenic (+30/+6)	ghxQ/ygfS	guanine/hypoxanthine transporter GhxQ/putative oxidoreductase, 4Fe‑4S ferredoxin‑type subunit

GGAAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGAAAGAAATCTCCGCGCTGAAAGGCGCGGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3028644‑3028494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCGCTGTTCACAGAG  >  NC_000913/3028518‑3028658                                                                                                                                                                                                                                                                                                      GGAAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACCGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGCATCCTCTCTGAAAGAAACCTCCGCGCTGCAAGG                                                                                                                                                       >  2:592151/1‑143   AAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGGGGTGAGGATCCTCTCTGAAAGAAGTCTCCGCGCTGAAAGGCG                                                                                                                                                     >  1:619276/1‑143      AGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGAAAGAAATCTCCGCGCTGAAAGGCGCGG                                                                                                                                                  >  1:469808/1‑143      AGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGAAAGAAACCTCCGCGCTGAAAGGCGCGG                                                                                                                                                  >  1:365647/1‑143            CAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTCCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGACAGCCATGAGAATCCTGTCTGAAAGAAATCTCCGCGCTGAGAGGCGCGacagagc                                                                                                                                            >  2:929019/1‑136                                                                                                      GCGGTGAGAATCCTCTCTGAAAGAAATCTCCGCGCTGAAAGGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAAC                                                                >  1:816377/1‑129                                                                                                      GCGGTGAGAATCCTCTCTGAAAGAAATCTCCGCGCTGAAAGGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAAC                                                                <  2:816377/129‑1                                                                                                                               ATCTCCGCGCTGAAAGGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTGTCTTTCAGTCAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGC                         >  1:806890/1‑143                                                                                                                                  TCCGCGCTGAAAGGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGGAAGCAACTGCAGCGCCTGTGTGGGGCAAGACTCAACGCAGGCTGGCCCC                      >  2:549993/1‑143                                                                                                                                                 GCGGGGATCTCTTCCAGAGAGGCTCCGCACCGCTGGCAACAATACGCTGCTGGCGGCCTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCGCTGTTCA       <  2:894203/143‑1                                                                                                                                                   GGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCGCTGTTCACA     <  1:597893/143‑1                                                                                                                                                     AGAGTTCTGGCAGGGAGGAGGCTCACCGCTGGCAGCAATGCGCTGCTGGCGGGCTCGCCTGAGTTCTCTTTCAGTGAGCAACGGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCGCTGTTCACAGA   <  2:661057/143‑1                                                                                                                                                      GATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCGCTGTTCACAGAG  <  1:412675/143‑1                                                                                                                                                                                                                                                                                                      GGAAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGAAAGAAATCTCCGCGCTGAAAGGCGCGGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3028644‑3028494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCGCTGTTCACAGAG  >  NC_000913/3028518‑3028658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.