| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3028494 = | 49 (0.890) | 4 (0.080) | 4/246 | NT | 8.4% | intergenic (+6/+30) | ghxQ/ygfS | guanine/hypoxanthine transporter GhxQ/putative oxidoreductase, 4Fe‑4S ferredoxin‑type subunit |
| ? | NC_000913 | 3028518 = | 42 (0.820) | intergenic (+30/+6) | ghxQ/ygfS | guanine/hypoxanthine transporter GhxQ/putative oxidoreductase, 4Fe‑4S ferredoxin‑type subunit | |||||
TACCGGTATTATGCTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGG > NC_000913/3028353‑3028634 | ctctgtgaacagcgggaagaggggccagcctgcgttgaatcttgcccaacacaggcgctgcagttgcttactgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaatc < 1:412675‑M1/2‑1 (MQ=255) tctgtgaacagcgggaagaggggccagcctgcgttgaatcttgcccaacacaggcgctgccgttgctcactgaaagagaactcaggcgagcccgccagcagcgcattgctgccagcggtgagcctcctccctgccagaactct < 2:661057‑M1/3‑1 (MQ=255) tgtgaacagcgggaagaggggccagcctgcgttgaatcttgcccaacacaggcgctgcagttgcttactgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTcc < 1:597893‑M1/5‑1 (MQ=255) tgaacagcgggaagaggggccagcctgcgttgaatcttgcccaacacaggcgctgcagttgcttactgaaagagaactcaggcgaggccgccagcagcgtattgttgccagcggtgcggagcctctctggaagagaTCCCcgc < 2:894203‑M1/7‑1 (MQ=255) gTATTATGCTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCcgc < 1:53347/143‑1 (MQ=255) cgggtcTTTGGGAGCCTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAGAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCa < 2:689118/138‑1 (MQ=255) cTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGGCTTTcg > 2:112418/1‑142 (MQ=255) cTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCa < 1:495032/143‑1 (MQ=255) ggCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGAGGTTGGGCAGTACAATAGATTCCGCGAGCCTTTCAgcg > 2:619276/1‑143 (MQ=255) ctgtgtgGCACTGGGCGTAGGCGGGGGTTTTGAGCGCGAATGGCAGAAGCTGAATAGTGGGACGGTGATCGTTACTGCCGCACTTGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGcgcg < 2:778281/140‑1 (MQ=255) ggggccagcctgcgttgagtcttgccccacacaggcgctgcagttgcttcctgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCCTTTCAGCGCGga > 2:549993‑M1/122‑143 (MQ=255) gccagcctgcgttgaatcttgcccaacacaggcgctgcagttgctgactgaaagacaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCCTTTCAGCGCGGAGAt > 1:806890‑M1/119‑143 (MQ=255) gACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAACAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCCATCTAATAGATCCTCCGCGCCTCCCCGCGCggcgctc > 2:48454/1‑138 (MQ=255) gtatgggtggtAGGCCTTGTCTTTTCGCTCTAAGGGCAAAAGCTGAATATTGGTACGGCGTGTGTTACTGCCGCACTGGTCGCCTTTTACGTGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGAttt < 2:556970/138‑1 (MQ=255) acTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGAATATTACGCAGGTGATTGGGCAAATTAAAAAATTCTCCGAGCCTTTCAGCGCGGAGAtttct > 1:537497/1‑143 (MQ=255) cTGGTCGTAGGCCGCGTCTTTGCCCGCGAATGGCAAAATTTCAATATTTGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGAtttctt < 2:570722/143‑1 (MQ=255) aGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCagagag < 1:255888/143‑1 (MQ=255) cgcgTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACCCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGAtt > 1:397037/1‑143 (MQ=255) gTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGGGCTTTCTTTCCGAGTGGATtctc > 1:207678/1‑143 (MQ=255) cTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCAc < 2:191196/143‑1 (MQ=255) tttGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCAcc > 1:21807/1‑143 (MQ=255) tGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGACGCACTGGTCGAATTTTAAGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCAcaga > 1:1032868/1‑140 (MQ=255) cgAATGGCAAAAGCTGAACATTGGTACAGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGcaa < 1:1000563/143‑1 (MQ=255) aaTGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGcaaca > 1:838148/1‑143 (MQ=255) gCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGCGGATTCTCACCGCTGGCCACACTAc > 1:454853/1‑143 (MQ=255) gttgcttactgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGc > 1:816377‑M1/80‑129 (MQ=255) gttgcttactgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGc < 2:816377‑M1/50‑1 (MQ=255) aaaaGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCCACAATACgc > 1:717533/1‑143 (MQ=255) aaaGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGATCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACACTCCgct > 1:47414/1‑143 (MQ=255) cTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGctgctg < 2:680791/143‑1 (MQ=255) cTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGCATTCTCACCGCTGGCAACAATACCctgctg > 2:685731/1‑143 (MQ=255) tatTGGGACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGa < 1:909851/143‑1 (MQ=255) gtggggTGATCATTGCTGCCGCACCGGCCGCATTTTCCGCGGGTTGTTGGGCGATCTATTAGATTGTCCGCGCCGTTCCGCGGGGAGATTTCTTTCAGAGAGGAGTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGc < 2:780733/139‑1 (MQ=255) gTACGGGGATCATTACTGCCGCACTGGGCGCATGTGACGCGGGTGGGTGGGCAATCTAATAGACTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGc < 2:312187/143‑1 (MQ=255) gaCGGTGATCCTGCCGGCCTCGCGGGTCGCTTTTTCCGCGGGTGGTTGGGCAATCTCGTAGGTTCTCGGCGCCTTTGGGCGCGGAGATTTCGTTCAGGGAGTGTTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGcc < 2:1025987/142‑1 (MQ=255) gcGGTGATCCTGACTGCCGGACTGGTCGCATTTTACGCGGGTGGTGGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCt < 2:478942/142‑1 (MQ=255) cGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGGTTCTCACCGCTGGCAACAATACGCTGCGGGCGGACTCGCCTg > 2:333299/1‑143 (MQ=255) aTCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGAGCAATCTAATAGATTCTCCGCGCCTGTCAGCGCGGAGATTTCTTTCAGAGAGGAGTCTCACCCCTGGCAACAACACGCGGCCAGCGGACACGCCCGacgtc > 2:845631/1‑139 (MQ=255) aTCATTACTGCCGCACTGGGCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGCGGATTCTCACCGCTGGCAACAAGACGCGGCGGGCGGACTCGCCTGAGCtc > 2:108294/1‑143 (MQ=255) gttACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTctct < 2:157539/142‑1 (MQ=255) aTTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTctct > 1:404395/1‑143 (MQ=255) tACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCttt < 1:925884/143‑1 (MQ=255) cTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCa < 2:281947/143‑1 (MQ=255) cTGCCGCACTGGTCGCATTTTACGCGGCTGGTTGGGCACTCTAATAGATTCTCCGCGCCTTTCAGCTCGGAGATTTCTTTCCGCGGGGATTCTCCCCGCTGGCAACCATACGCTGCTGGCGGACTCTCCCGACGTCTCCTTCa > 1:127730/1‑143 (MQ=255) cacACTCGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTGTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTaa < 1:977527/141‑1 (MQ=255) gCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTAGCATGAGTTCTCAATTAATATGCCACTGCac > 2:365647/1‑142 (MQ=255) tgtttACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACCATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAgcg < 2:342656/141‑1 (MQ=255) aTTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAgcg > 2:113989/1‑143 (MQ=255) ttttACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGGGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCGGAGTTCTGTTTCAGTCAGCAACTGCAggtc > 1:788693/1‑140 (MQ=255) cgGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGtt > 1:252563/1‑143 (MQ=255) ggtggtTGGGCAATCTCATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCCGTAAGCAACTGCAGCGCCTGTGTTgg < 1:519713/143‑1 (MQ=255) gtggtTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTggg > 2:311131/1‑143 (MQ=255) ttGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAg < 1:84977/143‑1 (MQ=255) tCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCttt > 1:1037439/1‑102 (MQ=255) tCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCttt < 2:1037439/102‑1 (MQ=255) aTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAgg > 2:70928/1‑143 (MQ=255) aTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACCCTGCTGGCGGCCTCGCCTGAGTTCTCTTTTTCTCAGCAACTTCAGCGCCCGTGTTGGGCAAGATTCAACGCAgg > 1:442020/1‑143 (MQ=255) tAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACCATACGCTGCTGGCGGACTCGCCTGTGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACCCAGGc > 1:580108/1‑143 (MQ=255) aTTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTgg < 1:421481/143‑1 (MQ=255) | TACCGGTATTATGCTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGG > NC_000913/3028353‑3028634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |