| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 932414 | 40 (0.730) | 4 (0.080) | 4/250 | NT | 9.3% | intergenic (‑364/‑181) | trxB/lrp | thioredoxin reductase/DNA‑binding transcriptional dual regulator Lrp |
| ? | NC_000913 | = 932420 | 40 (0.770) | intergenic (‑370/‑175) | trxB/lrp | thioredoxin reductase/DNA‑binding transcriptional dual regulator Lrp | |||||
TAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACAGTGATGTTTCAGGGT > NC_000913/932274‑932555 | tAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTgg > 1:244085/1‑143 (MQ=255)tAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTGTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTACATCCCATGTTTACCG‑TGCTAGTGACATCTACGGCTGGCGTgg > 1:450242/1‑143 (MQ=255) cGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTTGAGGTAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGCGGACAGacg < 2:804923‑M2/143‑4 (MQ=255) cGATGTTTTGCTTTGACAATCCCCTAGTTGTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGacg > 1:130414‑M2/1‑140 (MQ=255) gATGTGTTGCTTTGACAACCCCCTGGTGCTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGacgc > 2:30025‑M2/1‑139 (MQ=255) ttttGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCCTGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGCCGCCAtt > 1:103781/1‑143 (MQ=255) ttttGCTTGGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTctgtccacgccata < 1:55994‑M1/143‑15 (MQ=255) tttGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAACTACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTc > 1:641402/1‑143 (MQ=255) ttGCTTTGACAAGCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCg < 2:39842/143‑1 (MQ=255) gCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTctgtccacgccatacgta < 1:1024569‑M1/143‑19 (MQ=255) gCTTTGACAAGCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTg < 1:116477/143‑1 (MQ=255) cTTTGACAATCCCCTGGTGTTTTGCGAATATTTTGGTTGAAT‑TAAAAAAACATTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGa < 1:194498/143‑1 (MQ=255) tttGGCAATCGCCGGGTGTTTGGCGAAAAGAGTCGCGGCAG‑CAAAAAAAACGTGTTCTTATGTGTGAATAACAATGCATGTAAATACCATGTTTGCCG‑TGCTAGTGATATGTCTTTATGGCGTGGACAGACGCCATTCGTGAt < 2:270792/143‑1 (MQ=255) tttGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTGCAGCACCTTGT‑AGAACTCCGTATGGCGTTGACGGACGCCATTCgcgct > 1:769432/1‑139 (MQ=255) tGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGAATGGCGTGGACAGACGCCGTTCGTGacgc > 1:134834/1‑140 (MQ=255) gcatggtGTTGTGCGAAAGCATCCGAGGAAG‑AAAAAAACCAGTATTCTTATATGCGGATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTctgtccacgccatacgtagatttcactagc < 2:68685‑M1/140‑31 (MQ=255) cTGGTGTCTTGCGAAAACATACGAGGAAG‑AAAAAAAACAGTATTCCTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGc < 1:736136/143‑1 (MQ=255) ttttGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAg < 1:15281/143‑1 (MQ=255) tgtaaaccatTGTAGGAAG‑AAAAAACACATTATTTTTATATGCGCATAACCATGCATGTAAATACCATCTTTACCG‑AGCTAGTGAAATCTACGTATGGCGTctgtccacgccatacgtagatttcactagcacggtaaacatg < 2:354092‑M1/140‑43 (MQ=255) gCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCCTGTTTACCG‑TGCTAGTGAAATCTCCGTATCGCGTGGACAGACGCCACTCGTGAT‑GTCGCTAGCCGCCACAAGGCag > 2:684131/1‑142 (MQ=255) aaaaCATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGGT‑GTCGCTAGCTGCCACCAGGCAACgg > 1:85864/1‑143 (MQ=255) caaCACTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGt < 1:630619/142‑1 (MQ=255) cATTCGAGGAAG‑AAACAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TTCTAGTGAAATCTACGTATGGCGGGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGtctt < 1:926870/143‑1 (MQ=255) aTTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACCAGGCACCGGtgctg > 1:94689/1‑139 (MQ=255) ttCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGtcttct < 1:754886/143‑1 (MQ=255) ttCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCAGGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGtcttct < 1:1003670/143‑1 (MQ=255) gAGGAAGAAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCCTTCGTGAT‑GTCGATAGATGCCACACGGCGGCGGTGTTCTCa > 1:996116/1‑143 (MQ=255) gAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCGTCTCAc > 1:401801/1‑143 (MQ=255) ggAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCg < 2:595300/143‑1 (MQ=255) aag‑aaAAACATCAGTATTTTTATATGGGCTGACTCATGCATGTAAATGCGATGTTTACCG‑TGCTCGTGAACTCTACGTATGGCGTGGACAGACGCCACTCGTGAT‑GTCTATAGCTGCCACAAGGCAACGGTCTTCTCACCGTa < 2:642578/143‑1 (MQ=255) aaaaaaCAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTCCCCACCGTAGAcgc > 2:647508/1‑141 (MQ=255) caaagCAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCa < 1:29584/142‑1 (MQ=255) aaaaaCAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCa > 2:41146/1‑143 (MQ=255) aGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACACGGCAACGGTCTTCTCACCGTAGACCCAGGCAtt > 1:465598/1‑143 (MQ=255) cTTATATGCGCATAACCATGCATGTAAATACCATGTTTACAG‑TGCTAGCGAAATCTACGTATGGCGAGGACAGACGCCATTCGTGGT‑GTCGAAAGCAGGCACAAGGCAACGGTCTACACACCGTAGACCCAGGCAAAgcgcgc > 2:285770/1‑143 (MQ=255) gcgcATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCGACAAGGCAACGGTCTTCTCACCGTAGACCCAGGAATTGTGCGCCGTGact > 1:669988/1‑141 (MQ=255) catgcatgTAAATACCATGTTTACCG‑TGCTAGTGACATCTACGTATGGCGTGGACAGTCGCCCTTCGTGAT‑GTCGATCGCTGCCCCAAGGGCACGGTCTTCCCACCGTAGACCCCGCCAATGCGCGCCGTCACTCTTCacaat > 2:420773/1‑139 (MQ=255) gcatgTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCCACGGTCTTCTCACCGTAGACCGAGGCATTGCGCGCCGTGAATGTTCCTGATTTc > 1:63267/1‑143 (MQ=255) aaaTACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCCGGATTAGCGCGAGGTGACTCTTCATGATTTAgggcgg > 2:616431/1‑139 (MQ=255) tatcATGTTTACCA‑TGCTAGTGAGTGCAACGGAGGGCGTGGACAGACGCCACTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCg < 1:33608/140‑1 (MQ=255) tACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACGCAGGCATTGCGCGCCGTGAGTCTTCGTGATGGCGGGCTATCg > 1:786414/1‑143 (MQ=255) cATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGacgccatacgtagatttcactagctcggtaaagatggtatttacatgcatggttatgcgcatataaaaataatgtgttttttcttcctacaatggtttaca < 2:354092‑M2/143‑102 (MQ=255) aCCG‑TGCTAGTGGAATCTACGTATGGCGTGGA‑AAAATATTTTCTGGTTGGTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAg < 2:219536/143‑1 (MQ=255) g‑TGCTAGTGGAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGa < 2:755801/143‑1 (MQ=255) g‑TGCTAGTGAACTCTGCGTATGGCGTGGACAGACGCCATTCGTGAT‑GTGGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGa < 2:744375/143‑1 (MQ=255) g‑TGATAGTGAAATCTACCTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGa < 1:6698/143‑1 (MQ=255) tGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGGCTTCTCACCGTAGACCCAGGCATTGCGCGCCGGGAAACTTCATGACTAAGGGCAATAGCGACGGGtggggga > 2:252965/1‑137 (MQ=255) gCTAGTGAAATCTACGTATGGCGTGGACAGacgccatacgtagatttcactagcacggtaaacatggtatttacatgcatggttatccgcatataagaatactggtttttttcttcctcggatgctttcgcacaacaccatgc < 2:68685‑M2/143‑114 (MQ=255) tAGTGAAATCTACGTATGGCGTGGACAGACCCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGActct < 2:336582/143‑1 (MQ=255) tACGTATGGCGTGGACAGacgccatacgtagatttcactagcacggtaaacatggtatttacatgcatggttatgcgcatataagaatactgttttttttcttcctcgaatgttttcgcaaaacaccaggggattgtcaaagc < 1:1024569‑M2/143‑126 (MQ=255) gTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTCGACCCAGGCATTGCGCGCCGTGCCTCCTCATGCTTTCCGTCTATCGTGACCGGCAGCGACTCTGAACAGTGATGtt > 1:90696/1‑143 (MQ=255) tATGGCGTGGACAGacgccatacgtagatttcactagcacggtaaacatggtatttacatgcatggttatgcgcatataagaatactgttttttttcttcctcgaatgttttcgcaaaacaccaggggattgtccaagcaaaa < 1:55994‑M2/143‑130 (MQ=255) aTGGCGTGGCCAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTGACCGTAGACCCAGGCATCGCGCGCCGGGAATCTTCATGATTGCGGACTATCGTGACGGGTAGCGGCTCTGAACAgtggtgcgtc > 2:891411/1‑139 (MQ=255) ggCGCGGACAGACGCCAGTCGTGAT‑GTCGAGAGCGGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTTAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACAGTGATGTTTCAg < 1:317016/143‑1 (MQ=255) gCGTctgtccacgccatacgtagatttcactagcacggtaaacatggtatttacatgcatggttatgcgcatataagaatactgttttttttcttcctcgaatgttttcgcaaagcaccagggggttgtcaaagcaacacatc > 2:30025‑M1/1‑4 (MQ=255) gCGTGGACAGCCGCCATTCGTGAT‑GGTGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACAGTGATGTTTCAgg < 2:884381/143‑1 (MQ=255) gCGGGGACATACGCCACTCGGGAT‑GTCGATAGGTGCCACAAGGCAACGGTCTGCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACAGTGATGTTTCAgg < 2:627071/143‑1 (MQ=255) cGTctgtccgcgccatacgtagatttcactagcacggtaaacatggtatttacatgcatggttatgcgcatataagaatactgttttttttctacctcaaatgttttcgcaaaacaccaggggattgtcaaagcaaaacatcg < 2:804923‑M1/143‑141 (MQ=255) cGTctgtccacgccatacgtagatttcactagcacggtaaacatggtatttacatgcatggttatgcgcatataagaatactgttttttttcttcctcgaatgttttcgcaaacaactaggggattgtcaaagcaaaacatcg > 1:130414‑M1/1‑3 (MQ=255) gTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACCGTGCTGTTTCAGGGt > 1:980823/1‑143 (MQ=255) gTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACAGTGCTGTTTCAGGGt > 1:60223/1‑143 (MQ=255) | TAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑AAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCG‑TGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGAT‑GTCGATAGCTGCCACAAGGCAACGGTCTTCTCACCGTAGACCCAGGCATTGCGCGCCGTGAATCTTCATGATTTCGGTCTATCGTGACGGGTAGCGACTCTGAACAGTGATGTTTCAGGGT > NC_000913/932274‑932555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |