New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2848667 =	29 (0.530)	3 (0.060)	3/258	NT	8.8%	coding (575/1827 nt)	hycC	formate hydrogenlyase subunit HycC
	?	NC_000913	2848734 =	34 (0.630)					coding (508/1827 nt)	hycC	formate hydrogenlyase subunit HycC

TACCGTAGAAAACAACGCGGCAGCTGGCGCAGAGGCGTTCGCATGTGCCTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGG  >  NC_000913/2848534‑2848808                                                                                                                                      |                                                                                                                                              tACCGTAGAAAACAACGCGGCAGCTGGCGCAGAGGCGTTCGCATGTGCCTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCCAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGccggt                                                                                                                                      >  1:771811/1‑139 (MQ=255)         aaaaCAACGCGGCAGCTGGCGCAGAGGCGTTCGCATGTGCCTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCCGATATCGGAACCGGGCGGCAGCTGTTGCATACGc                                                                                                                              >  1:116223/1‑143 (MQ=255)            cgcgcgcgGCGGCCGGCGGGGAGGCGGTCGCATGCGCCTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCGGGGAAATGATGGAGGTGTTCGGCAGCTGTTGCATACGCata                                                                                                                           <  2:872428/139‑1 (MQ=255)                  cgGCAGCTGGCGCAGAGGCGTTCGCATGTGCCTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCcagc                                                                                                                     <  1:604924/143‑1 (MQ=255)                         tGGCGCAGAGGCGTTCGCATGTGCCTGCGGCACCCAGCCGTGCAGCGGAATACTCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGGTGCATACGCCTATCCAGCAGgcgcc                                                                                                              >  2:545816/1‑142 (MQ=255)                          ggagcAGAGGCGTGCGCAGGTGACCGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAg                                                                                                             <  1:480838/140‑1 (MQ=255)                            gaaatcatggccctgtgcgcggtgttcctcaccagcaacagcaaagagggcaaactgtggtttgcgctggggcgtcttggcactctgctgctggcgcttgcttgctGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGAt                                                                                                           <  1:360720‑M1/37‑1 (MQ=255)                             gcAGTGGCGTTCGCATGTGCCTGCGGTTCCGATGCGGGCGGCGGAATATTCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATc                                                                                                          <  2:261103/143‑1 (MQ=255)                                gagGCGTGCGCATGTGCCGGCGGCACCCAGCCGGGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAg                                                                                                       <  1:849821/143‑1 (MQ=255)                                                 cTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCAAATCCAGCAGGCGCAGAACGAGCGCGCCGTAACGCGGcc                                                                                      >  2:333104/1‑143 (MQ=255)                                                      gCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATAGCCAGCAGGCGCAGATCCAGCGTCCCGTAACGCTGCCAcagc                                                                                 >  1:883722/1‑143 (MQ=255)                                                        aCCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCCGATCCAGCGTGCCGTAACGCTGCCAcagcag                                                                               >  2:400594/1‑143 (MQ=255)                                                         cccAGCCGGGCAGCGGAAGAAGCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACagcagc                                                                              <  1:933636/143‑1 (MQ=255)                                                           cAGCCGCGCCGCGGAGTGGCCCCCGCCGGCGGGCCGACGCCATTCGCGCCGCGCAGCCCGGTAGCGGAACCGAGCGGCAGCTGTTCCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGcagaca                                                                            <  2:632262/143‑1 (MQ=255)                                                            aGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACCGcagccag                                                                           >  1:874575/1‑143 (MQ=255)                                                            aGCCGGGCAGCGGAATAACCGCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGCCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGcagccag                                                                           <  1:142509/143‑1 (MQ=255)                                                               cctGCAGCGGAATAACCCCGGCCAGCGGGCCAAAGCCAATCCCCCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaa                                                                        <  1:352097/141‑1 (MQ=255)                                                               caacagcaaagagggcaaactgtggtttgcgctggggcgtcttggcactctgctgctggcgattgcttgctGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaa                                                                        >  1:919464‑M1/72‑143 (MQ=255)                                                                  gacgtggAATAATCGCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaagca                                                                     <  2:158413/138‑1 (MQ=255)                                                                  ccAGCGGAATAAACCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaagca                                                                     <  1:348869/142‑1 (MQ=255)                                                                   aatacagatggcaaactgtggtttgcgctggggcgtcttggcactctgctgctggcgattgcttgctGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAgcaagcaa                                                                    >  2:360720‑M1/68‑143 (MQ=255)                                                                     gCGGAACACTCCCGGCCAGCAGGCCACAGCCACCCGCGCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCACCCAGCAAGCAATc                                                                  <  1:613187/143‑1 (MQ=255)                                                                         aataatCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCca                                                              <  1:539271/143‑1 (MQ=255)                                                                                     cagcagGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATCTCCAGCCGGCGCAGACGCAGCGTGCCGTAACGCTGCCGCAGCAGACAGAAAGGACTCGCCAGCCGCAGAgcgc                                                  >  2:145849/1‑143 (MQ=255)                                                                                     cagcagGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCcag                                                                                                                      <  1:383692/75‑1 (MQ=255)                                                                                     cagcagGCAAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCcag                                                                                                                      >  2:383692/1‑75 (MQ=255)                                                                                              taaGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAACGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGACCCAGCGTGCCGTAACGCCGCCACCGCAGCCAGCAAGCAATCGCCCGCAGCAGAGAGGCAACACGcg                                         >  2:872980/2‑142 (MQ=255)                                                                                                   cAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTATTGCATACGCATATCCAGCCGGCGCAGATCCAGCGTGCCGTAACGCAGCCACAGCAGCCAGCAAGCCATCGCCAGCAGCAGCGTGCCCAGACGCCCCGgc                                    >  2:547316/1‑143 (MQ=255)                                                                                                           ccGAGCACCGACATATCGGAACCGGGCGGCGGCGGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACca                            <  2:938304/143‑1 (MQ=255)                                                                                                                 agcCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATCTCCAGCAGGCGCAGATCCAGCGTGCCGTACCGCTGCCACAGCAGCCAGCACGCAATCGCCAGCAGCAGAGCGCCAAGACGCCCCACCGCACCCCACAGtct                      >  2:427053/1‑141 (MQ=255)                                                                                                                   ccAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCGGCAGCGTGCCAAGACGCCCCAGCGCAAAGCACCGTTGGc                    >  1:831998/1‑143 (MQ=255)                                                                                                                             caaCCGCGCGCCAGCTGTGGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTttgct          <  2:528544/142‑1 (MQ=255)                                                                                                                                     cGGCAGCTGTTGCACACGCAGATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTgg  <  1:455717/143‑1 (MQ=255)                                                                                                                                      |                                                                                                                                              TACCGTAGAAAACAACGCGGCAGCTGGCGCAGAGGCGTTCGCATGTGCCTGCGGCACCCAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGG  >  NC_000913/2848534‑2848808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.