New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2848667 =	29 (0.530)	3 (0.060)	3/258	NT	8.8%	coding (575/1827 nt)	hycC	formate hydrogenlyase subunit HycC
	?	NC_000913	2848734 =	34 (0.630)					coding (508/1827 nt)	hycC	formate hydrogenlyase subunit HycC

CAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTACCACGAACATGCCGAGGTTGCTGGCAATG  >  NC_000913/2848592‑2848876                                                                                                                                               |                                                                                                                                               cAGCCGCGCCGCGGAGTGGCCCCCGCCGGCGGGCCGACGCCATTCGCGCCGCGCAGCCCGGTAGCGGAACCGAGCGGCAGCTGTTCCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGcagaca                                                                                                                                                <  2:632262/143‑1 (MQ=255)  aGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACCGcagccag                                                                                                                                               >  1:874575/1‑143 (MQ=255)  aGCCGGGCAGCGGAATAACCGCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGCCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGcagccag                                                                                                                                               <  1:142509/143‑1 (MQ=255)     cctGCAGCGGAATAACCCCGGCCAGCGGGCCAAAGCCAATCCCCCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaa                                                                                                                                            <  1:352097/141‑1 (MQ=255)     caacagcaaagagggcaaactgtggtttgcgctggggcgtcttggcactctgctgctggcgattgcttgctGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaa                                                                                                                                            >  1:919464‑M1/72‑143 (MQ=255)        gacgtggAATAATCGCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaagca                                                                                                                                         <  2:158413/138‑1 (MQ=255)        ccAGCGGAATAAACCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCagcaagca                                                                                                                                         <  1:348869/142‑1 (MQ=255)         aatacagatggcaaactgtggtttgcgctggggcgtcttggcactctgctgctggcgattgcttgctGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAgcaagcaa                                                                                                                                        >  2:360720‑M1/68‑143 (MQ=255)           gCGGAACACTCCCGGCCAGCAGGCCACAGCCACCCGCGCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCACCCAGCAAGCAATc                                                                                                                                      <  1:613187/143‑1 (MQ=255)               aataatCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCca                                                                                                                                  <  1:539271/143‑1 (MQ=255)                           cagcagGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATCTCCAGCCGGCGCAGACGCAGCGTGCCGTAACGCTGCCGCAGCAGACAGAAAGGACTCGCCAGCCGCAGAgcgc                                                                                                                      >  2:145849/1‑143 (MQ=255)                                    taaGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAACGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGACCCAGCGTGCCGTAACGCCGCCACCGCAGCCAGCAAGCAATCGCCCGCAGCAGAGAGGCAACACGcg                                                                                                             >  2:872980/2‑142 (MQ=255)                                         cAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTATTGCATACGCATATCCAGCCGGCGCAGATCCAGCGTGCCGTAACGCAGCCACAGCAGCCAGCAAGCCATCGCCAGCAGCAGCGTGCCCAGACGCCCCGgc                                                                                                        >  2:547316/1‑143 (MQ=255)                                                 ccGAGCACCGACATATCGGAACCGGGCGGCGGCGGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACca                                                                                                <  2:938304/143‑1 (MQ=255)                                                       agcCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATCTCCAGCAGGCGCAGATCCAGCGTGCCGTACCGCTGCCACAGCAGCCAGCACGCAATCGCCAGCAGCAGAGCGCCAAGACGCCCCACCGCACCCCACAGtct                                                                                          >  2:427053/1‑141 (MQ=255)                                                         ccAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCGGCAGCGTGCCAAGACGCCCCAGCGCAAAGCACCGTTGGc                                                                                        >  1:831998/1‑143 (MQ=255)                                                                   ttgcttgctggctgctgtggcagcgttacggcacgctggatctgcgcctgctggatatgcgtatgcaacagctgccAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTttgccatctgtatt                                                                              >  2:360720‑M2/77‑138 (MQ=255)                                                                   caaCCGCGCGCCAGCTGTGGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTttgct                                                                              <  2:528544/142‑1 (MQ=255)                                                                       ttgctggctgctgtggcagcgttacggcacgctggatctgcgcctgctggatatgcgtatgcaacagctgccAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTttgctgttg                                                                          >  1:919464‑M2/73‑143 (MQ=255)                                                                           cGGCAGCTGTTGCACACGCAGATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTgg                                                                      <  1:455717/143‑1 (MQ=255)                                                                                gcggctGCGTACGCAACGCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCGGCCACAGCAGCCAGCAAGCCATCGCCAGCAGCAGAGTGGCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAgg                                                                 <  1:545816/138‑1 (MQ=255)                                                                                    ttGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCACCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCCGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGCTGGCGAaca                                                             >  2:599262/1‑143 (MQ=255)                                                                                        aTACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGTAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGGGAGGCACACcgc                                                         >  1:217158/1‑143 (MQ=255)                                                                                          aCGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCgcgc                                                       >  1:703462/1‑143 (MQ=255)                                                                                               tatCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCGCCAGCGCAAACCACAGTTTGCCCGCTTTGCTGTGGCTGGGAAGGAACACCGCGCACAgg                                                  >  2:922197/1‑143 (MQ=255)                                                                                                ctCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAggg                                                 <  2:97793/142‑1 (MQ=255)                                                                                                  ccAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAg                                                                  >  1:247528/1‑124 (MQ=255)                                                                                                  ccAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAg                                                                  <  2:247528/124‑1 (MQ=255)                                                                                                  ccAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCGGTTGCGGGTGAGGCACACCGAGCAAAGGGcc                                               >  1:584612/1‑143 (MQ=255)                                                                                                    agcagGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCAt                                             <  1:957640/143‑1 (MQ=255)                                                                                                    agcagGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCAt                                             >  1:545444/1‑143 (MQ=255)                                                                                                         gcgcAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAAACGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACCGGGCCGTGAttt                                        >  1:322810/1‑143 (MQ=255)                                                                                                          atctgcgcctgctggatatgcgtatgcaacagctgccAGCAAGCAAGCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTc                                       <  1:360720‑M2/106‑1 (MQ=255)                                                                                                           gcAGATCCAGCGGGCCGGACCGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCTCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCg                                      <  2:889439/143‑1 (MQ=255)                                                                                                               aTCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCGATCGCCAGCACCAGAGTGCCAAGACGCCCCAGCGCAGACCACCGTTTGCCCTCTTTGCTGTCGCTGGTGAGGAACACCGCGCACAGGCCCACGATCTCGGCCa                                  >  2:497135/1‑143 (MQ=255)                                                                                                                tCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCAt                                 >  1:348626/1‑143 (MQ=255)                                                                                                                    gggcgcggTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTAcc                             <  2:873533/136‑1 (MQ=255)                                                                                                                    gCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTAcc                             >  1:780477/1‑143 (MQ=255)                                                                                                                                gCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGCGAGGAACACCGCGCACAGGGCCCTGAGTTCGGCCATTACCACGAACATGCCg                 >  1:423230/1‑143 (MQ=255)                                                                                                                                gCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAATTTGCCCACTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCAGTACCACGAACaaaccg                 >  2:155463/1‑138 (MQ=255)                                                                                                                                gCTGCCACAGCAGCCAGCAAGCAAACGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTCGCCATCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCACGACTTCGGCCATTACCACGAACATGCCg                 >  2:353118/1‑143 (MQ=255)                                                                                                                                   gCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGACCTCTTTGCTGTTGCTGGTGAGGAACACCGCGAACAGGGCCATGCTTTCGCCCATCGCCACGAACATGCCGAgg              >  1:962463/1‑143 (MQ=255)                                                                                                                                      gcagcacCCAGCAAGGAATCGCCAGCAGCAGAGTGCCACGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTACCACGAACATGCCGAGGTTg           <  1:955627/142‑1 (MQ=255)                                                                                                                                      acaGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTACCACGAACATGCCGCGGTTg           >  1:327887/1‑143 (MQ=255)                                                                                                                                               agcaagcaATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTACCACGAACATGCCGAGGTTGCTGGCCATg  >  1:789038/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                               CAGCCGTGCAGCGGAATAATCCCGGCCAGCAGGCCAAAGCCAATCACTCCGAGCAGCCAGATATCGGAACCGAGCGGCAGCTGTTGCATACGCATATCCAGCAGGCGCAGATCCAGCGTGCCGTAACGCTGCCACAGCAGCCAGCAAGCAATCGCCAGCAGCAGAGTGCCAAGACGCCCCAGCGCAAACCACAGTTTGCCCTCTTTGCTGTTGCTGGTGAGGAACACCGCGCACAGGGCCATGATTTCGGCCATTACCACGAACATGCCGAGGTTGCTGGCAATG  >  NC_000913/2848592‑2848876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.