New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3947039 =84 (1.530)6 (0.120) 5/246 NT 6.8% intergenic (+7/+89) trpT/hdfR tRNA‑Trp/DNA‑binding transcriptional dual regulator HdfR
?NC_000913 3947061 = 86 (1.680)intergenic (+29/+67) trpT/hdfR tRNA‑Trp/DNA‑binding transcriptional dual regulator HdfR

Only 100 of 107 total aligned reads displayed.

TACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATT  >  NC_000913/3946897‑3947181
                                                                                                                                              |                                                                                                                                               
tcgctgcaaaatagcgataaaaatgcgttgattcgcgatcttttgaaaattaacgtgctggatgaagtgtattaatatgaattgctggcaaggatgcccgtagaaggatttacctcggagagggttatttcagataaaaaaaa                                                                                                                                                 >  1:925663‑M1/143‑143 (MQ=255)
 ggctgcaaaatagcgataaaaatgcgttgattcgcgatcttttgaaaattaacgtgctggatgcagtgtattaatatgaatggctggcaaggatgccggtagaaggatttacttcggagagggttatttcagataacaacaAt                                                                                                                                                <  1:1047011‑M1/2‑1 (MQ=255)
  gcggcctgTCTCGCAGGGTGTCTCGGGTGCGAGTCCCGTCCGTTCCGCCACCCTCATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAatcatc                                                                                                                                               <  2:450099/140‑1 (MQ=39)
  cctcgctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCGCTCCGCCCCTGCCAGAAatcatc                                                                                                                                               <  2:1048310/138‑1 (MQ=255)
   ctgcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGACTCTCCGCCCCTGCCAGAAATCATcc                                                                                                                                              >  2:300928/1‑143 (MQ=255)
   ctgcaaaatagcgataaaaatgcgttgattcgcgatcttttgaaaattaacgtgctggatgaagtgtattaatatgaatggctggcaaggatgccggtagaaggatttacttcggagagggttatttcagatgcaaaaaGTcc                                                                                                                                              <  2:561953‑M1/4‑1 (MQ=255)
    tgcctgTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGACCTCATCCt                                                                                                                                             >  2:704197/1‑143 (MQ=255)
    tgcaaaatagcgataaaaatgcgttgattcgcgatcttttgaaaattaacgtgctggatgaagtgtattaatatgaatggctggcaaggatgccgctagaaggatttccttcggagagggttatttcagataaaaaaaATCCt                                                                                                                                             <  1:964350‑M1/5‑1 (MQ=255)
     gcaaaatagcgataaaaatgcgttgattcgcgatcttttgaaaattaaagtgctggatcaagtgtattaatatgaatggctggcacggatgccggtagaaggatgtacttcggagagggttatttcagataaaaaagATCCtt                                                                                                                                            <  2:525533‑M1/6‑1 (MQ=255)
        tgtgccgcgGGGGGTCGCGGGTCCGGGTCCCGTCCGTTCCGCCACCGTAATTAGGGGCGTAGTTCAATTGGTAGGGCACCGGTCTCCAAAACCGGGTGTTGGGCGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGc                                                                                                                                         <  2:491614/138‑1 (MQ=255)
        tgTCACGCAGGGGGTCGCGGGTTCGAGACACGTCAGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGAGTTCGAGACTCTCCGCCCCTTGCAGACAGAATCCTTaac                                                                                                                                         >  2:639527/1‑141 (MQ=37)
          tCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGGAATCATCCTTAGCGa                                                                                                                                       >  1:909727/1‑143 (MQ=255)
                cggggcTCGCGGGTTGGGGGCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTa                                                                                                                                 <  2:4984/142‑1 (MQ=255)
                    agatgcgttgattcgctatcgtttgaagattaacgtgatgggtgaagtgtattaatatgaatggctggcaaggatgccggtagaaggatttacttcggagagggttatttcagataaaaaaaATCCTTAGCGAAAGCTAAGGa                                                                                                                             >  2:241813‑M1/123‑143 (MQ=255)
                           ggctCGAGGCTCGTCCTTTCCGCCGCCCTCATTAGGGGCCTAGTTTGTCTGTTAGATCCCCTGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑ttttttt                                                                                                                     <  2:1034447/140‑1 (MQ=255)
                            gTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGTGGCGCAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGAGTTGGGAGTTCGAGTCTCTCCGCCCCAGCCAGAAAGCATGCTTAGCGAAAGCAAAGGA‑tattgttt                                                                                                                    >  1:420942/1‑143 (MQ=255)
                              tCGAGGCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTAt                                                                                                                  <  1:570018/143‑1 (MQ=255)
                               tgcgcgatcttgtgaagattagggtggtggatgaagtgtattaatatgaagggctggcaagtatgccggtagaaggatttacttcggagagggttatttcagataaaaaaaATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATc                                                                                                                 >  2:720730‑M1/112‑143 (MQ=255)
                                 aGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTg                                                                                                               >  1:843505/1‑143 (MQ=255)
                                   tCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGaa                                                                                                             >  2:639710/1‑143 (MQ=255)
                                   tCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGaa                                                                                                             >  2:755805/1‑143 (MQ=255)
                                     ccgtccgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAAt                                                                                                           >  1:2126/1‑143 (MQ=255)
                                      cgtccgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATa                                                                                                          >  2:169999/1‑143 (MQ=255)
                                       gtccgtTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAACACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTACCTGAAATaa                                                                                                         >  1:927395/1‑143 (MQ=255)
                                            ttCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAAGCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTGTCTGAAATAACCctc                                                                                                    >  1:671398/1‑143 (MQ=255)
                                              aaattaacgtgctggatgaagtgtattaatatgaatggctggcaaggatgccggtagaaggatttacttcggagagggttatttcagataaaaaaaATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCtctc                                                                                                  >  1:652844‑M1/97‑143 (MQ=255)
                                              aaattaacgtgctggatgaagtgtattaatatgaatggctggcaaggatgccggtagaaggatttacttcggagagggttatttcagataaaaaaaATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCtctc                                                                                                  >  1:652755‑M1/97‑143 (MQ=255)
                                               cGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTTTCTCCGCCCCGGCCAGAAATCATCCTTGGCGAAAGCTAAGGT‑TTTTTTTTGTCTGAGATAAcccggtcc                                                                                                 >  1:17320/1‑138 (MQ=255)
                                               cGCCACCCTAATTAGGGGCGAAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTAAAATAACCctgtaa                                                                                                 >  2:370324/1‑139 (MQ=255)
                                                gCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCg                                                                                                >  1:937533/1‑143 (MQ=255)
                                                 ccACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCCGAAATCATCCTTAGCGACAGCTAAGGA‑TTTTTTTTATCAGGAAGAACCCTCTCCGa                                                                                               >  1:996925/1‑143 (MQ=255)
                                                  taatgggcgggaggaagtgtattattatgaatggctggcaaggatgccggtagaaggatttacttcggagagggttttttcatataaaaaaaATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGaa                                                                                              >  2:297819‑M1/93‑143 (MQ=255)
                                                   aCCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGATTTTTTTTTATCTGAAATAACCCTCTACGaa                                                                                              <  1:151859/143‑1 (MQ=255)
                                                   aCCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAg                                                                                             >  2:818570/1‑143 (MQ=255)
                                                    cccTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGt                                                                                            <  1:100925/143‑1 (MQ=255)
                                                    cccTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGt                                                                                            >  2:658751/1‑143 (MQ=255)
                                                      cTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTaa                                                                                          <  1:858986/143‑1 (MQ=255)
                                                           tAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCAGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCt                                                                                     >  1:148627/1‑143 (MQ=255)
                                                               ggCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTa                                                                                 >  1:586578/1‑143 (MQ=255)
                                                                gCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCATTCTAc                                                                                >  1:518851/1‑143 (MQ=255)
                                                                 cGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCGGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑GTTTTTTTATCTGAAATAACGCTCTCCGAAGTAGATCCTTCTAcc                                                                               >  1:152006/1‑143 (MQ=255)
                                                                  gTAGTTCGCTTGGTAGGGCGCCGGTCTCCGATACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCg                                                                              <  2:331918/143‑1 (MQ=255)
                                                                  gTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCg                                                                              >  2:640030/1‑143 (MQ=255)
                                                                      ttCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCACTGCCAGAGATCATCCTTAGCGCGAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCGTTCTACCGGCAt                                                                          >  1:648669/1‑143 (MQ=255)
                                                                         aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCt                                                                       >  1:1014669/1‑143 (MQ=255)
                                                                         aaTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCt                                                                       >  1:476867/1‑143 (MQ=255)
                                                                              gtcgagCGCCGGTCCCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTCGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgcca                                                                  <  2:773915/140‑1 (MQ=255)
                                                                              gTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgcca                                                                  <  2:691870/143‑1 (MQ=255)
                                                                                 gagCACCGGTCTCCAAAACCGGGTGTTGGGAGTCCGAGTCTCTCCGCCCCCGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTgccagcc                                                               <  1:277781/143‑1 (MQ=255)
                                                                                   gCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGGAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAt                                                             >  2:275969/1‑143 (MQ=255)
                                                                                       cGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGACGGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTcgt                                                         >  1:96611/1‑141 (MQ=255)
                                                                                       cGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGCAGTAAATCCTTCTACCGGCATCCTTGCCAGCCGTTCat                                                         >  1:763719/1‑143 (MQ=255)
                                                                                       cGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGCCTCTCGGCCCCGGCGAGGAATCATCCTTAGCGCAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAGTcct                                                         >  1:202882/1‑141 (MQ=255)
                                                                                        ggTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCata                                                        <  1:977226/143‑1 (MQ=255)
                                                                                         gTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCatat                                                       >  1:486157/1‑143 (MQ=255)
                                                                                         atctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCatat                                                       <  1:958826/142‑1 (MQ=255)
                                                                                          tctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATAtt                                                      <  1:737026/143‑1 (MQ=255)
                                                                                          tctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTCAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATAtt                                                      <  1:955856/143‑1 (MQ=255)
                                                                                           ctcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTa                                                     >  1:177401/1‑143 (MQ=255)
                                                                                           cgccAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTa                                                     <  2:89808/141‑1 (MQ=255)
                                                                                            tcCAAAGCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAACTCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATATCCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTaa                                                    <  1:970445/143‑1 (MQ=255)
                                                                                            tcCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑GTTTTTTTATCTGAAATAACACAATCCGACTTATGTCCTTATACACGCGTCCTTGCCAGCCATTCAGATTaa                                                    >  1:392955/1‑143 (MQ=255)
                                                                                              cagagccGGGTGCTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATATCCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATa                                                  <  2:783670/138‑1 (MQ=255)
                                                                                              cAAAATCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCGCTCCGAAGTAAATCCTTCTACCGGCATCGTTGCCAGCCATTCATATTAATa                                                  >  2:525840/1‑143 (MQ=255)
                                                                                              cAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCCTCCTTGCCACCCATTTatcctacta                                                  >  2:646692/1‑136 (MQ=255)
                                                                                              cAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATa                                                  >  1:894124/1‑143 (MQ=255)
                                                                                              cAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATa                                                  >  2:274046/1‑143 (MQ=255)
                                                                                                aaaCCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATaca                                                <  1:169999/143‑1 (MQ=255)
                                                                                                     gggTGTTGGGAGTTCGCGTCTCTCCGCCCCTGCCAGAACTCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCa                                           <  2:21662/143‑1 (MQ=255)
                                                                                                       gtgtTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATc                                         >  1:389870/1‑143 (MQ=255)
                                                                                                        tgtgGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGACATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATcc                                        <  1:815249/143‑1 (MQ=255)
                                                                                                        tgtTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATcc                                        >  1:411366/1‑143 (MQ=255)
                                                                                                          ttGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCGAGCCATGGATAGTAATACACTTCATCCAg                                      >  1:186849/1‑143 (MQ=255)
                                                                                                            cggAGTTCGAGTCTATCCGACACTGCCAGAAATCATCCTTCGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCa                                    <  2:772234/142‑1 (MQ=255)
                                                                                                             ggAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAACTAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGccc                                   >  1:293004/1‑141 (MQ=255)
                                                                                                                 ttCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGACAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCAGTCATATTAATACACTTCCTCCAGAACGTTa                               >  2:738204/1‑143 (MQ=255)
                                                                                                                 ttCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTa                               >  2:730198/1‑143 (MQ=255)
                                                                                                                 ttCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACAATTCATCCAGCACGTTa                               >  2:352846/1‑143 (MQ=255)
                                                                                                                   cGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGCGGTAAATCCTTCTACCGGCATCCTTGACAGCCCTTCATATTAATCCACTTCATCACGCACGTTAAt                             >  2:192345/1‑143 (MQ=255)
                                                                                                                    gAGTCTCTCCGACCCTGCCAGAACTCATCCTTAGCGAAAGCTAAGGA‑TTTTTTATATCTGAAATAACCCTCTCCGCAGTAAATATTTCTACCGCCATCCTTGCCAGCCACACATAGGTGAACACTTCATCCAGCACgcacatt                            >  2:215542/1‑137 (MQ=255)
                                                                                                                     aGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGC‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATCCATATTAATACCCTTCATCCAGCACGTTAAttt                           >  2:185914/1‑143 (MQ=255)
                                                                                                                        ctctcCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCa                        <  1:639710/143‑1 (MQ=255)
                                                                                                                         tctcCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTACGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCCTTCATATTAATCCACTTCATCCAGCCCCTTAATTTTCaa                       >  2:400973/1‑143 (MQ=255)
                                                                                                                         tctcCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGACATAACCCTCTCCGAAGGAAATTCTTCTACCGGCATCCTTGCCACCCGTTCATATTAATCTCCTTCATCCCGCACGTTCTTTTTCac                       >  2:440808/1‑142 (MQ=255)
                                                                                                                           tcCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaaaa                     >  1:981483/1‑143 (MQ=255)
                                                                                                                           agcgcgCCTGCAAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCaaaa                     <  1:81863/141‑1 (MQ=255)
                                                                                                                            ccGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCGTCCTTGCCAGCCATTCATATGAATACACTTCATCCAGCGCGTTCGTTTTCaaacg                    >  1:57501/1‑141 (MQ=255)
                                                                                                                              gCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGAt                  >  1:791879/1‑143 (MQ=255)
                                                                                                                                 ccTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATcgc               >  1:158128/1‑143 (MQ=255)
                                                                                                                                 ccTGCCAGAAATCATCCGTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATcgc               <  1:406553/143‑1 (MQ=255)
                                                                                                                                   tGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGa             <  1:810754/143‑1 (MQ=255)
                                                                                                                                       aGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGTCAGCCATTTATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATcg         >  1:93860/1‑142 (MQ=255)
                                                                                                                                       aGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATcc         >  2:236340/1‑142 (MQ=255)
                                                                                                                                         aaaTCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAAc       <  1:755805/143‑1 (MQ=255)
                                                                                                                                         aaaTCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATATGAGACAACCCTCTCCGCAGCAAACTATTCTACCTGCCTCCTTGCCAGCCACTCCTCTTAATACACTTCATCCGTCCCGTTCCTCTTCATCATATCGCGaccatcc       >  2:702635/1‑137 (MQ=255)
                                                                                                                                         aaaTCATCCTTAGCGAAAGCAAAGGA‑ATTTATTAATCTGAAATAACCCTCACCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAAc       <  1:364427/143‑1 (MQ=255)
                                                                                                                                          catcagcCTTATCGGAAGCTAAGGA‑TTTTTTTTATCTGACATACCGCGCTCCGAAGTAAATCCCTCTACCGGCATCCTTGTCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACg      <  2:453922/142‑1 (MQ=255)
                                                                                                                                           atcatcCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGc     >  1:785756/1‑143 (MQ=255)
                                                                                                                                            tcatcCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCa    <  1:47603/143‑1 (MQ=255)
                                                                                                                                              ATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTTTTTTTTTTAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCAtt  <  2:4543‑M1/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                               
TACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATCATCCTTAGCGAAAGCTAAGGA‑TTTTTTTTATCTGAAATAACCCTCTCCGAAGTAAATCCTTCTACCGGCATCCTTGCCAGCCATTCATATTAATACACTTCATCCAGCACGTTAATTTTCAAAAGATCGCGAATCAACGCATT  >  NC_000913/3946897‑3947181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.