| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1598588 | 44 (0.800) | 3 (0.060) | 3/248 | NT | 6.9% | intergenic (‑502/+29) | yneO/lsrK | AIDA‑I family autotransporter YneO/autoinducer‑2 kinase |
| ? | NC_000913 | = 1598600 | 40 (0.780) | intergenic (‑514/+17) | yneO/lsrK | AIDA‑I family autotransporter YneO/autoinducer‑2 kinase | |||||
AGAAAAATAGCAATTTTCCCTTGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTG > NC_000913/1598461‑1598741 | aGAAAAATAGCAATTTTCCCTTGAATATCGTACTGGAGATGGAACGATGAAACTGAAAACTGGCATTTAACAAGACAGCTCTAAAAGAAGAGAAATAAGAATAACGATACTCAAAAACTAAAAGGCAAGAACAACATGAcgta > 2:349226/1‑142 (MQ=255) aaaaaTATCAATTTTCCCTTGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATgtggc > 1:742648‑M2/1‑138 (MQ=255) aataTAGCCATGTTCCCTGGAAGATCGTACTGGGGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCt < 1:11202/140‑1 (MQ=255) cAATTTTCCCTTGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATg > 1:261111/1‑143 (MQ=255) aaagtgcccTTCAATATCGTAGTGGTGAGGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGTAATAATAATAACTATACTCAAAAACTAACAGCCACGGTCAGCATGATGTGGCTGTCAATGa < 1:136647/137‑1 (MQ=255) atcttCCCTTGAATATCGTACTGGTGATGGAACGATGACTCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGaa < 1:565169/140‑1 (MQ=255) ttttCCCTTGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGaaa < 1:271574/143‑1 (MQ=255) ttgtCCCTTGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGaaa < 1:571082/140‑1 (MQ=255) ttGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAACAGAAGGGAAAAAAGCACAACTATACTCAAAAACTAACAGCCACGGCCATCATGATGTGACTGTCAATGAAACCATAAc > 2:319287/1‑143 (MQ=255) ttGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAAc > 1:849556/1‑143 (MQ=255) ttGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAAc > 1:510889/1‑143 (MQ=255) ttGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAAc < 1:25178/143‑1 (MQ=255) tACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGCATCTATAACCCAGGCGCtt > 1:70310/1‑143 (MQ=255) tACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCtt > 1:55820/1‑143 (MQ=255) cTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGACTAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTc < 1:557134/143‑1 (MQ=255) cTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTc < 1:815126/143‑1 (MQ=255) gAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTACAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAacgac < 2:391571/143‑1 (MQ=255) ccaTGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGAcgtc < 2:879575/141‑1 (MQ=255) tGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAAGAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACgtcgtc < 2:261899/143‑1 (MQ=255) gAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATCACGACGTCGTCa > 2:649803/1‑143 (MQ=255) tGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCa > 1:138133/1‑143 (MQ=255) gCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTGTCCATAACGACGTCGTCAGTCCAt > 1:157912/1‑143 (MQ=255) aaGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGa < 2:991128/143‑1 (MQ=255) aaGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGa < 2:510889/143‑1 (MQ=255) aaGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGa < 1:161229/143‑1 (MQ=255) aGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGAt > 1:206435/1‑143 (MQ=255) gcttgcttGTCACAAGCCAGCGCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATc < 2:900832/143‑1 (MQ=255) cTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCa < 2:382262/143‑1 (MQ=255) aaGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATGACGACGTCGTCAGTCCATGATCAACCAGCCCCAGc > 1:565330/1‑143 (MQ=255) tctAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATATGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGCTCACCCAGCACCAGCTGATCCTg > 1:83339/1‑143 (MQ=255) tAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGAt < 2:973706/143‑1 (MQ=255) gaagGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATgtggctgttagtttttgagtatagttattcttatttcccttcttttagagctggcttgttaaaagccagcttgcagattcatcgttcca < 1:840892‑M2/143‑90 (MQ=255) agGGAAATAAGAATAACTATACTCAAAAACTAACCGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCACGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAActgc < 2:136485/143‑1 (MQ=255) agGCAAATACGCATAACTCTTCGCAACAACTCACATCCACTGTCATCATGATGTGGCTGTCAATGAAACTAGAACCCATGCTCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAActgc < 2:550168/143‑1 (MQ=255) aaTAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCCGTCCATGATCAACCAGCCCCGGCTGATCCTGATAAACTGCCTGCCACTTAt > 1:295224/1‑143 (MQ=255) aaCTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAACTGCCTGCCACTTATcgc < 1:94518/143‑1 (MQ=255) aCTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGCTCCTGATAAACTGCCTGCCCCCTATcgcg > 1:867703/1‑143 (MQ=255) cTCAAAAACTAACAGACACGGTCATCATGAAGTGGCTATCAATGAAACTATAACCCAGGCGCTTTCCATAAGGACATCGTCAGTCCATGATCAACAAGCCCCAGCTGAACCTGATAACCTGCCTGCCACTTATAGCGTAAATc > 2:291524/1‑143 (MQ=255) tCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATACACTGCCTGCCACTTATCGCGCGCATcc > 2:962148/1‑143 (MQ=255) cAAAAACTAACAGCCACGGTCATCATGATgtggctgttagtttttgagtatagttattcttatttcccttcttttagagctggcttgttaaaagccagcttgcagattcatcgttccatcaccagtacgatattcaagggaaa < 1:859996‑M2/143‑115 (MQ=255) cAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCTTAACGACGTCGTCAGTCCATGATAAAAAAGGCCCAGCTGAACAAGAGAAACTGCCGGCCACTTATAGCGTGAATGCt > 2:508836/1‑143 (MQ=255) cAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTGTCCATAACGACGTCGCAAGTCCACGACCAACCAGCCCCCGCCGATCCAGACCACCTGACAACCACCCAACGCGTGAATccc > 2:176198/1‑142 (MQ=255) aaaaCTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGACCCAGCTGATCCCGATAAACTGCCTGCCACTTATCGCGTGAATCCTGa > 2:448776/1‑143 (MQ=255) ccACGGTCATCATGATgtggctgttagtttttgagaatagttattcttatttcccttcttttagagctggcttgttaaaagccagcttgcagattcatcgtcccatcacaagtacgatattcaaggggaaattgctattttta < 1:1031911‑M2/143‑128 (MQ=255) ccACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATCAACTGCCTGCCACTTATCCCGTGAATCCTGATAAAGTTCATg > 2:233953/1‑143 (MQ=255) tcatcaTGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGGATCCTGATAAAGTTCATGCtttgc > 1:317248/1‑141 (MQ=255) tcatGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCgg < 1:114244/143‑1 (MQ=255) atgTGGCTGTCAATGAGACTATAACCCAGGCTCGCTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTg < 2:261111/143‑1 (MQ=255) | AGAAAAATAGCAATTTTCCCTTGAATATCGTACTGGTGATGGAACGATGAATCTGCAAGCTGGCTTTTAACAAGCCAGCTCTAAAAGAAGGGAAATAAGAATAACTATACTCAAAAACTAACAGCCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTG > NC_000913/1598461‑1598741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |