New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2042116 =	42 (0.770)	3 (0.060)	3/244	NT	7.4%	intergenic (+91/‑252)	zinT/yodB	metal‑binding protein ZinT/putative cytochrome
	?	NC_000913	2042149 =	36 (0.710)					intergenic (+124/‑219)	zinT/yodB	metal‑binding protein ZinT/putative cytochrome

GAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAATTTTTTAAATAACAAATTA  >  NC_000913/2042008‑2042291                                                                                                                                              |                                                                                                                                               gAAATGATGGCTGATTGAGTATTCTCAGGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACACGCGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGtata                                                                                                                                               <  1:850878/143‑1 (MQ=255)    gtggtctctcCTTGATTATTCTCATGATAACGCCTCGATTCCGCTTTAGTAAGTTATCATAGCTGCCACTGGTCCATCCACAACCGCCACTGGACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATta                                                                                                                                            <  2:674326/137‑1 (MQ=255)      gatgTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATAACGAGTCTGTATATtaat                                                                                                                                          >  2:334423/1‑143 (MQ=255)      agtcaatataagcaatggcgtgagcacaggtatctttctctgttggccgtattgtgtatggtatccgttattggttaactcaatgcgggttagcttattaataTACAGACACGCTCATCACTATGACGTGTCTGTATATtaat                                                                                                                                          >  2:798299‑M1/104‑143 (MQ=255)       gccaatataagcaatggcgtgagcacaggtatctttctctgttggccgtattgtgtatggaatccgttattggttaactcaatgcgggttagcttattaataTACAGACACGCTCATCACTATGACGTGTCTGTATATtaata                                                                                                                                         >  2:584323‑M1/103‑143 (MQ=255)                tGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGGATATTAATAAGCTAAccc                                                                                                                                >  1:344841/1‑143 (MQ=255)                   gTATGCTCATGATAACGCTCCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCa                                                                                                                             <  1:272221/143‑1 (MQ=255)                        ctcATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAg                                                                                                                        <  2:439070/143‑1 (MQ=255)                        ctcATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAg                                                                                                                        <  1:302124/143‑1 (MQ=255)                         tcATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGt                                                                                                                       >  1:274036/1‑143 (MQ=255)                                 aCGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAAt                                                                                                               >  1:294366/1‑143 (MQ=255)                                    ccTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTCGCTAGAGACACGCTCATCACTATGACGCGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAAc                                                                                                            >  1:1007125/1‑143 (MQ=255)                                     cccGATGCCCCTTTAGTACGTTATCATAACTGCCACTGGTCCCTCCACAAACGCCACTGAACGCAAGCTAGCTACAGACCCGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACg                                                                                                           <  2:848799/141‑1 (MQ=255)                                       cGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGACCCCCCACAAACGCCACTGAACGCAATCTAGCTACAGACACGCTCATCCCTAAGACGTGTCTGTAAACAAATAAACTAACCACCAATGAGATCACCAAAAACCGa                                                                                                         >  2:699560/1‑143 (MQ=255)                                         aTGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGCGTTAACCAATAACGGAtt                                                                                                       >  1:787076/1‑143 (MQ=255)                                           gCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTcc                                                                                                     <  2:463545/143‑1 (MQ=255)                                            cggCTGTAGTAAGTTAGCATAACTGCCACTGGTCCATCCCCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCa                                                                                                    <  1:321288/141‑1 (MQ=255)                                              tcTTTGGGAAGTTATCATAACTGCCTCTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATa                                                                                                  <  2:409846/142‑1 (MQ=255)                                                       aGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACg                                                                                         <  1:573632/143‑1 (MQ=255)                                                       aGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACAAATAACGGATTCCATACACAATACg                                                                                         >  1:52970/1‑143 (MQ=255)                                                        gTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACgg                                                                                        <  2:47691/143‑1 (MQ=255)                                                                   tGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGaa                                                                             <  1:563208/143‑1 (MQ=255)                                                                     ccACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCACTAACGGATTCCATACACAATACGGCCAACAGCGAAAg                                                                           >  2:395514/1‑143 (MQ=255)                                                                      cACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGa                                                                          >  1:494368/1‑143 (MQ=255)                                                                               atccaCAAACGCCACTGAACGCGAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACACTACGGCCAACAGAGAAAGATACCTCTGc                                                                 >  2:1041271/1‑143 (MQ=255)                                                                               atccaCAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGAATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATGCCATACACAATACGGCCAACAGAGAAAGATAccacagc                                                                 >  2:65009/1‑138 (MQ=255)                                                                                   cctcaCGCCCCTGAACGCCAGCGAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCAc                                                             <  2:11776/139‑1 (MQ=255)                                                                                   acaAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCAc                                                             >  1:358470/1‑143 (MQ=255)                                                                                     gaaCACCTCTGAGCGGAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGc                                                           <  2:908107/142‑1 (MQ=255)                                                                                     aaaCGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGc                                                           <  2:294366/143‑1 (MQ=255)                                                                                            aCTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCt                                                    >  1:932644/1‑143 (MQ=255)                                                                                                aaCGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTtata                                                >  1:211099/1‑143 (MQ=255)                                                                                                     tattaatatacagacacgtcatagtgatgagcgtgtctgtaTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGc                                           >  2:584323‑M2/42‑143 (MQ=255)                                                                                                      attaatatacagacacgtcatagtgatgagcgtgtctgtaTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATACCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGACt                                          >  2:798299‑M2/41‑143 (MQ=255)                                                                                                        ctagctaCAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAGCCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTgg                                        <  2:791704/143‑1 (MQ=255)                                                                                                          agctaCAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAAAAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGtt                                      <  2:90888/143‑1 (MQ=255)                                                                                                               cagacacgtcatagtgatgagcgtgtctgtaTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAat                                 >  1:71258‑M2/32‑143 (MQ=255)                                                                                                               CAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAACGATACCTGTGCTCACGCCATTGCTTATATCGGCTGGTTACAat                                 <  2:885052‑M1/143‑1 (MQ=255)                                                                                                                  ACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGATTATATTGGCAGGttccaaactg                              <  2:396439‑M1/143‑5 (MQ=255)                                                                                                                  ACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCAATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTCCAATATg                              <  1:680363‑M1/143‑1 (MQ=255)                                                                                                                        tcatcaCTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACCATATGCCCTAt                        >  1:541047/1‑143 (MQ=255)                                                                                                                           tcaCTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGGTCACGCCATTGCTAGTATTAGCTGGTTACAATATGCACAACCaa                     >  2:822519/1‑143 (MQ=255)                                                                                                                           tcaCTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATAGCTTAAACAGGGCGGTCACAAAATGCACTACCaa                     >  2:914632/1‑143 (MQ=255)                                                                                                                            caCTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAAt                    <  2:115018/143‑1 (MQ=255)                                                                                                                              cTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATAc                                                                                          >  1:672369/1‑71 (MQ=255)                                                                                                                              cTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATAc                                                                                          <  2:672369/71‑1 (MQ=255)                                                                                                                               tATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAAtttt                 >  1:361803/1‑143 (MQ=255)                                                                                                                               tATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAAtttt                 >  2:13228/1‑143 (MQ=255)                                                                                                                                        tctgtaTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAATTTTTTAAATAAc        <  1:142430‑M2/137‑1 (MQ=255)                                                                                                                                        tctgtaTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAATTTTTTAAATAAc        <  1:882402‑M2/137‑1 (MQ=255)                                                                                                                                          tgtaTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTCTCAATTTTTTAAATAACaa      >  2:971263‑M2/5‑143 (MQ=255)                                                                                                                                            taTATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAATTTTTTAAATAACAAAt    >  1:471325‑M2/3‑143 (MQ=255)                                                                                                                                              tatTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAATTTTTTAAATAACAAatta  <  1:914996/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               GAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGCTCATCACTATGACGTGTCTGTATATTAATAAGCTAACCCGCATTGAGTTAACCAATAACGGATTCCATACACAATACGGCCAACAGAGAAAGATACCTGTGCTCACGCCATTGCTTATATTGGCTGGTTACAATATGCACTATCAATTTTTTAAATAACAAATTA  >  NC_000913/2042008‑2042291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.