New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2455052 =49 (0.890)4 (0.080) 4/246 NT 8.0% intergenic (‑51/+31) yfcU/yfcV putative outer membrane usher protein YfcU/putative fimbrial protein YfcV
?NC_000913 2455076 = 46 (0.900)intergenic (‑75/+7) yfcU/yfcV putative outer membrane usher protein YfcU/putative fimbrial protein YfcV

TCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATTAGTGGCAGTATC  >  NC_000913/2454935‑2455211
                                                                                                                                             |                                                                                                                                       
tCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGAAATCCAAAAAGAGAATGGTCAGGCATACACGTTATTATCCGTTTTTATTCTTGTGCGGCCAAAATGCGTGTAAATACCCCATAGGAGTGCCGCCATGGGGGt                                                                                                                                        >  1:1002408/1‑143 (MQ=255)
  ccTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCCATGGGGGTAt                                                                                                                                      >  2:672971/1‑143 (MQ=255)
   cTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGCAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATg                                                                                                                                     >  2:955369/1‑143 (MQ=255)
     gACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGcc                                                                                                                                   <  1:849327/143‑1 (MQ=255)
         ttGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTAc                                                                                                                               <  1:1062224/143‑1 (MQ=255)
           gCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAg                                                                                                                             >  1:955208/1‑143 (MQ=255)
             cAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGgt                                                                                                                           >  1:164736/1‑143 (MQ=255)
               gcgcAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGgtaa                                                                                                                         <  1:960547/143‑1 (MQ=255)
                       caccacGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTg                                                                                                                 >  1:580585/1‑143 (MQ=255)
                        ttaaagcctggctggtcggcgcagctgatgcgccagatctgggtaatttcgaagcaaataccaccttccagattacttacctgtaaggcatacCCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGgtaa                                                                                                                         >  1:832178‑M1/94‑134 (MQ=255)
                        ttaaagcctggctggtcggcgcagctgatgcgccagatctgggtaatttcgaagcaaataccaccttccagattacttacctgtaaggcatacCCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGgtaa                                                                                                                         <  2:832178‑M1/41‑1 (MQ=255)
                        accacGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGCAAGTACTCTgg                                                                                                                >  2:1051373/1‑143 (MQ=255)
                          cacTGAATATTCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGaa                                                                                                              <  2:160433/143‑1 (MQ=255)
                          cacGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGATATGGGGTTATTACTTACAGGTCAGTAAGCTGGaa                                                                                                              >  2:395774/1‑143 (MQ=255)
                            cGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAgg                                                                                                            >  2:855017/1‑143 (MQ=255)
                                 gaaTCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTTAACACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTa                                                                                                       >  1:489734/1‑143 (MQ=255)
                                   aTCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAGTCTGGAAGGTGGTAtt                                                                                                     >  1:142645/1‑143 (MQ=255)
                                      cGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATAGCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGc                                                                                                  <  1:154737/143‑1 (MQ=255)
                                         aaTCGAAAAAGACAATGGTCAGGCATACACGTTTTTATCCGTTTTTGTTCTTGTTCGGTCAAAATCTATTTATATACTCCATAGCAGTGTCGCTATGGGGGTATGCCTTATAGGTAAGTAATCTGGAAGGTGGTATTTGCTTc                                                                                               <  2:234693/143‑1 (MQ=255)
                                             gAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGaaa                                                                                           <  1:37399/143‑1 (MQ=255)
                                              aaaaaGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAATAATCTGGAAGGTGGTATTTGCTTCGAAAt                                                                                          <  1:419686/143‑1 (MQ=255)
                                                     gaATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAg                                                                                   <  2:164736/143‑1 (MQ=255)
                                                        tGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATc                                                                                <  1:206703/143‑1 (MQ=255)
                                                          gTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTg                                                                              <  1:432147/143‑1 (MQ=255)
                                                          gTCAGGCATACACGTTTTTATCCGCTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTg                                                                              <  2:789610/143‑1 (MQ=255)
                                                            cAGGCATACACGTTTTTATCCGCTTTTATCCATGTTCTCGCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGgc                                                                            <  1:34786/143‑1 (MQ=255)
                                                                  tACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCGTTTAAATACCCCATAGCAGTGTCGCTATGGTGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCa                                                                      <  2:772523/143‑1 (MQ=255)
                                                                   acacGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAg                                                                     >  2:726373/1‑143 (MQ=255)
                                                                    cacGTTTTTATCCGGTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGc                                                                    <  1:604348/143‑1 (MQ=255)
                                                                     ccGTTCTTATCCTTTTTTATTCTTGTCCGGTCAAAATCCATCTAAATACCCCATAGCTGTGTCGCTATGGCGGTATGCCTTACAGGTAAGCAATCTGGAAGGTGGTATTCGCTTCGAAAGTACCCAGATCTGGCGCATCAGCt                                                                   <  2:81555/142‑1 (MQ=255)
                                                                      cGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAGTACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTg                                                                  <  2:451939/143‑1 (MQ=255)
                                                                       gTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTgc                                                                 <  1:448396/143‑1 (MQ=255)
                                                                                  tttttATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGACCATCCGCTGCGCTGAccagac                                                      >  2:1062016/1‑141 (MQ=255)
                                                                                    tttATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCCGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGGAGGTGGTCTTTGCTTGGAGATTCCCCAGATCTGGCGCATCATCTGCGCCGAccagcccg                                                    >  1:170346/1‑141 (MQ=255)
                                                                                          cTTGCTCGGTCAAAACCCATTTAATTACCCCATAGCAGTGTCGCTCTGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTa                                              <  1:88228/143‑1 (MQ=255)
                                                                                            tGTTCGGTCACAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTaaa                                            <  1:553638/143‑1 (MQ=255)
                                                                                            tGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTaaa                                            <  1:155915/143‑1 (MQ=255)
                                                                                            tGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTaaa                                            <  1:53372/143‑1 (MQ=255)
                                                                                               tCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGtt                                         <  2:178562/143‑1 (MQ=255)
                                                                                                 ggTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCATCCCAACCAGGCTTTAAAGTTCa                                       >  2:689663/1‑143 (MQ=255)
                                                                                                   tCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGCGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTACaga                                     <  1:672971/143‑1 (MQ=255)
                                                                                                    ttacctgtaaggcatacccccatagcgacactgctatggggGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTaa                                             >  1:832178‑M2/42‑134 (MQ=255)
                                                                                                    ttacctgtaaggcatacccccatagcgacactgctatggggGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTaa                                             <  2:832178‑M2/93‑1 (MQ=255)
                                                                                                     aaaaTCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGTTATGCCTTACAGGTAAGTACTTCGCCCCCCTGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGt                                   <  1:1059660/143‑1 (MQ=255)
                                                                                                     aaaaTCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGt                                   <  1:405746/143‑1 (MQ=255)
                                                                                                      aaaTCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCagagcc                                  <  1:249500/143‑3 (MQ=255)
                                                                                                          ccATTTAAATACCCCATAGCCGTGTCGCAATGGGGGTCTGCTCTTCAAGGAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCt                              <  1:1051373/143‑1 (MQ=255)
                                                                                                             tttAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATAAGCTGCGCCGACCAGACAGGCTTTAAAGTTCAGCGTCTGCttgg                           >  2:443903/1‑141 (MQ=255)
                                                                                                                 aaTACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCttt                       >  2:248821/1‑143 (MQ=255)
                                                                                                                   tACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGc                     >  2:690352/1‑143 (MQ=255)
                                                                                                                   tACCCCATAGCAGTGTCGCGATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGc                     <  1:804303/143‑1 (MQ=255)
                                                                                                                     ccccatagcgacactgctatggggGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCGTTAAAGTTCAGAGCCTGCTTCGCTTTGCCt                   >  2:787596‑M2/25‑143 (MQ=255)
                                                                                                                       ccatagcgacactgctatggggGTATGCCTTACAGGTAAGTAATCTGGCAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTCAAGTTCAGAGTCTGCTTCGCTTTGCCttt                 >  2:29587‑M2/23‑143 (MQ=255)
                                                                                                                        CATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAACGTGCAGAGTCTGCTTCGCGTTGCCTtta                <  1:56522‑M1/143‑1 (MQ=255)
                                                                                                                        CATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCCGCTTGCCTtta                <  2:212671‑M1/143‑1 (MQ=255)
                                                                                                                              aGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATTAGTg          <  1:944717/143‑1 (MQ=255)
                                                                                                                              aGTGTCGCTATGGGGGTATGCCTTACAGGTAAGCAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATTAGTg          <  2:599726/143‑1 (MQ=255)
                                                                                                                               gtgtCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTGCAGAGTCTGCTTCGCTTTGCCTTTATTAGTgg         >  1:536584/1‑143 (MQ=255)
                                                                                                                                acactgctatgggGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATGAGTGGc        >  1:783424‑M2/14‑143 (MQ=255)
                                                                                                                                 gtCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATTAGTGGCa       >  1:271046/1‑143 (MQ=255)
                                                                                                                                  tggctatgggtGTGTGCCTTCCAGGTAAGTAATCTGGTAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATTAGTGGCAg      <  2:1018797‑M2/132‑1 (MQ=255)
                                                                                                                                  tCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAGAGTTCGTAGACTGCTTGGCTTTGGCTGTATTAGTCGCAg      >  2:855425/1‑143 (MQ=255)
                                                                                                                                      tatggggGTATGCCTTACAGGCAAGTAATCTGGAAGGTGGTATTTGCGTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAACTTCAGAGTCTGCTTCGCTTTGACTCTATTAGTGGCAGTGTc  >  2:621820‑M2/8‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                       
TCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCAGTGTCGCTATGGGGGTATGCCTTACAGGTAAGTAATCTGGAAGGTGGTATTTGCTTCGAAATTACCCAGATCTGGCGCATCAGCTGCGCCGACCAGCCAGGCTTTAAAGTTCAGAGTCTGCTTCGCTTTGCCTTTATTAGTGGCAGTATC  >  NC_000913/2454935‑2455211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.