| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2067353 | NA (NA) | 5 (0.250) | 4/258 | NT | 29.9% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2079471 = | 12 (0.580) | intergenic (‑110/+62) | yeeX/yeeA | DUF496 domain‑containing protein YeeX/putative transporter YeeA | |||||
CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTAC‑TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGACCCAGTCGGGGATATATTCCATCTTCTCGCTGA > NC_000913/2067211‑2067495 | cAAGAAAATCTCTTTTCTGGTCTG‑CAGCAGTTGCTTGCTGAATTCTCTGTCCGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTCCCATGGCTCCAGATGACAAACACTATCTCATATCCGGGACTTGTTCGCACCCTcc > 2:218864/1‑143 (MQ=11) tttCTGGTCTGACGGCGCTTAC‑TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACcaca < 1:25929/143‑1 (MQ=255) ggCGCTTAC‑TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCtctctc > 1:272232/1‑143 (MQ=255) gcccTTAC‑TGCTGAATTCACTGTCGGCGAAGGTAAGTTTATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCg < 1:107520/140‑1 (MQ=255) gcTTAC‑TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGt > 1:68922/1‑143 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCctatcataccctttatccttgctgaatcgaagcagca > 1:368178‑M1/1‑106 (MQ=255) tCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTcaca < 1:366821/143‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCAtt < 1:99262/143‑1 (MQ=255) cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACa > 1:156612/1‑143 (MQ=255) tCATGATGAACCCTGTTCCATGGCTCCAGATGACAAAAGTGTTCTCATATCAGGGACTTGTTCGCACCTTCCctatcataacctttatcattaccgaatcgaagcagcagcaagatgatcatgaaggccgagaattatttgcg > 2:324777‑M1/1‑72 (MQ=255) ccTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGcc > 2:108907/1‑143 (MQ=255) tGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCctatcataccctttatccttgctgaatcgaagcagcagcaagatgattctgaagttcaggaattatttgcgcaaggcccggcaa > 1:146743‑M1/1‑59 (MQ=255) ttCCATGGCTCCGGGTGACAAATATGATCTCATATCAGGGACTTGTTCGCTCCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGccacca < 2:45671/143‑1 (MQ=255) ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCctatcataccctttatccttgctgaatcgaagcagcagcaagatgattctgaagttcaggaattatttgcgcaaggcccggcaaatcagattcgat > 1:363561‑M1/1‑47 (MQ=255) ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCctatcataccctttatccttgctgaatcgaagcagcagcaagatgattctgaagttcaggaattatttgcgcaaggcccggcaaatcagattcgat > 1:360919‑M1/1‑47 (MQ=255) aTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCggg < 1:327966/143‑1 (MQ=255) gACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTa > 2:18837/1‑143 (MQ=255) atCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGCCCCAGTCggg > 1:15509/1‑143 (MQ=255) cgggggCTTGTTCGCCCCTTCCCTCGAACACCACAATTTCGCACTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGACCCAGTCGGGGa < 2:135935/141‑1 (MQ=255) cACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGACCCAGTCGGGGATATATTCCAtcttc > 1:362197/1‑143 (MQ=255) tCCCTAGAACACCACAACTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGACCCAGTCGGGGATATATTCCATCTTCTCGCt < 2:332814/143‑1 (MQ=255) ccTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGACCCAGTCGGGGATATATTCCATCTTCTCGCTGa < 1:18837/143‑1 (MQ=255) | CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTAC‑TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGAACACCACAATTTCGCTCTCTCGGTAAGGCACTGTCACAGCATTCAACAGAATGTGACTTGCCAGATTTATTAGCGCCACCAGATGTTTAACCGGGTAACCACGACCCAGTCGGGGATATATTCCATCTTCTCGCTGA > NC_000913/2067211‑2067495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |