New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2067353 | NA (NA) | 5 (0.250) | 4/258 | NT | 29.9% | noncoding (1/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2079471 = | 12 (0.580) | intergenic (‑110/+62) | yeeX/yeeA | DUF496 domain‑containing protein YeeX/putative transporter YeeA |
GGTAGTTTCCATTTTTATACCCCTGATAATGTGAGAGTCGGATTCGTTTAAGCAACCGCTATTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCTGATGCGCCGTTTCCATGTTCAGCCACACATA > NC_000913/2079350‑2079610 | gttAGTTTACATTTTTATACCCCTGATAATGTGAGAGTCGGATTCGTTTAAGCAACCGCTATTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGc < 1:383698/141‑1 (MQ=255) tataCCCCTGATAATGTGAGAGTCGGATTCGTTTAAGCAACCGCTATTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAagcagca < 1:386407/143‑1 (MQ=255) ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttccatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCATACCCTTTATCCTTGCTGAATCGAagcagca > 1:368178‑M2/107‑143 (MQ=255) ccagATAATGTGAGAGTCGGATTCGTTTAAGCAACCGCTCTTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTCTCATACCCTTAATCCTTGCTGAATCGCAGCAGCACCAAga > 2:178840/4‑143 (MQ=255) tgtgAGAGTCGGATTCGTTTAAGCAACCGCTATTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTg < 2:374441/143‑1 (MQ=255) aTTCGTTTAAGCAACCGCTATTCGTTAGGGCCAACATTACTCATAGCCGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGact > 2:359055/1‑141 (MQ=255) tcatgatgaaccctgttccatggctccagatgacaaaagtgttctcatatcagggacttgttcgcaccttccCTATCATAACCTTTATCATTACCGAATCGAAGCAGCAGCAAGATGATCATGAAGGCCGAGAATTATTTgcg > 2:324777‑M2/73‑143 (MQ=255) cTATTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATGAGCGCAAAGccgg > 2:332259/1‑141 (MQ=255) tgttccatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCaa > 1:146743‑M2/60‑143 (MQ=255) gCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCACGGCAAATCAGAtt > 1:277765/1‑143 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGAt > 1:363561‑M2/48‑143 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGAt > 1:360919‑M2/48‑143 (MQ=255) aCATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTGTTTGCGCCAGGCCCGGCAACTCACATTCgcg > 1:12554/1‑141 (MQ=255) tAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGCAGTTCAGGAATTATTTGCGCAAGGCAAGGCGATTCAGGGTGGATGGCAACtaca > 2:295891/1‑140 (MQ=255) gCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCTGATgc < 2:302532/143‑1 (MQ=255) gCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAGTCAGATTCGATAGCAACTCAAGCTGGTGGGCCGGTTCCATg > 2:46918/1‑143 (MQ=255) aTCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCTGATACGCCGTTTCCATGTGCAGc > 2:251561/1‑143 (MQ=255) ccACTATCATACCCGTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCTGATGCGCCGTTTCCATGTTCAGCCACACATa < 1:209791/142‑1 (MQ=255) | GGTAGTTTCCATTTTTATACCCCTGATAATGTGAGAGTCGGATTCGTTTAAGCAACCGCTATTCGTTAGGGCCAACATTACTCATAGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCTGATGCGCCGTTTCCATGTTCAGCCACACATA > NC_000913/2079350‑2079610 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |