| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | 100% | coding (220‑224/951 nt) | corA → | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.030) | 45 (1.200) | 43/264 | NT | 97.8% | coding (219/951 nt) | corA | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| ? | NC_000913 | 4001650 = | 1 (0.030) | coding (225/951 nt) | corA | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001510‑4001792 | tatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagccctcgaagcatcggcacgtttctctgaagacgacgacgacctacaactc > 1:606793‑M2/141‑143 (MQ=255) gatggatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacctgcctggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 1:719880‑M2/7‑1 (MQ=255) gagtgatcttgtcgaaccggacgaccacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 2:388250‑M2/7‑1 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatcttaacttggccaatgcatggcaaccagcacggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct > 1:15135‑M2/136‑143 (MQ=255) tgtcgaactgtacgacgacgagccactgcgcgtacactctgaacttggccacggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 2:357396‑M2/10‑1 (MQ=255) gatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaaatggaagaaaaagaaacaacgacacgtttctttaaagaagacgacggcctgcatCTCctactgct > 1:428333‑M2/133‑143 (MQ=255) atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacctggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcatgcaaCTCcttcttctt > 1:456850‑M2/132‑143 (MQ=255) ggtcgaaccggacgacgacgagcgactgcgcgtacaatccgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt < 1:300092‑M2/16‑1 (MQ=255) ccgaacccgacgaagacgagggactgcgcgcacaatctgaacttggccagagcctcgcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:127201‑M2/18‑1 (MQ=255) aaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctgtgaccaccacgaccgcctgcacCTCCTTCTTCTGCTTCGAAGa > 2:539768‑M2/123‑143 (MQ=255) ggacgacgatgagctacggcgcgtacgatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCg < 2:402239‑M2/25‑1 (MQ=255) ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgcagcatcggcacgtttctttgaagacgaagaaggcctgcatCTCCTTATTCTTCTTTGAAGATGCg > 1:617760‑M2/119‑143 (MQ=255) cacgccgacgggcgactgcgcgtacgatctgaacttggccagagcctggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg < 2:677140‑M2/26‑1 (MQ=255) gtcgacgagggactgcgcgtataatctgaagttggccatagcctggcaacccgcccggaactggaagacatcgaagtatcggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg < 2:44880‑M2/29‑1 (MQ=255) gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTCTGAAGATGCGGAAg > 1:538226‑M2/115‑143 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTACTTCTTTGAAGATACGGAAGATCACg > 1:453037‑M2/109‑143 (MQ=255) cgcgtacaaactgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt < 1:354188‑M2/44‑1 (MQ=255) ttacaatttgaaattgcccagagcctgtcatccggtccggtactggatgacatctaaccatcgccacgtttctttgaagacgacgacggcctgcatCTCCGTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCa < 2:542215‑M2/47‑1 (MQ=255) tacaatctgaacttggacagagcctggcaacccgacgggaactggaagacatcgaagcatcggcacgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc < 1:491413‑M2/48‑1 (MQ=255) aatctgaacttggccagagcctggcaacgcggtgcgacacgcaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt < 2:538608‑M2/51‑1 (MQ=255) taCTTGGCCAGAGCCTGTCAGCTCGCACGTATGTGCAAGCTTTCGAAGCATCGGCAGGTTTCTTTGAAGATGACGACGGCGTGGAT‑‑‑‑‑CTCGTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 2:485939/142‑1 (MQ=255) atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctctgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 2:490453‑M2/52‑1 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAATACGCCGGTAACTACACTATGGCa > 1:179351‑M2/89‑143 (MQ=255) aacttggccagagcctggcaacccgcccggaactggaagacattgaagcatcggcacgtttctttgaagacgacgacggcctggatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 2:286781‑M2/57‑1 (MQ=255) cttggccattgcctggcaacccgctcggaactggaagacatcgaagtatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 1:413338‑M2/59‑1 (MQ=255) gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgatggcctgcatCTCTTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCAt < 1:398825‑M2/63‑1 (MQ=255) gccaatcaacccgcccgcaactggaagacatcgaagcaagggcacgtttcttcgaagacgacgacggcctgcatCTCCTTCTTCGTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 1:41778‑M2/69‑1 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacggttctttgaagacgaccacggcctgcatCTCCTTCTTCTTCATTAAAGATGCAAAAGATCACGCCGGGAACTCCACTGTGGCATTTACCATGCGTGAt > 1:757624‑M2/74‑143 (MQ=255) cctggcaacccgcccggaacgggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt < 2:701235‑M2/70‑1 (MQ=255) ctgggaactcgccctgaactggaagacatcgatgcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTGCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 1:108102‑M2/71‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTACTTTGAAGATGAGGAAGAACACGACGGTAACTCCACTGTGGCATTTACCATCCGTGATg > 1:308526‑M2/73‑143 (MQ=255) caacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg > 2:463254‑M2/69‑143 (MQ=255) cgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacaacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTAGCATGTACCATAAGTTATGGTAGTCTGt > 1:769812‑M2/64‑143 (MQ=255) gtctggaactggaagacatcgaagcatcgtcaggtttctttgaagacgacgtcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 2:75327‑M2/81‑1 (MQ=255) gcccggtactggtagacatctgagcattggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTTTTCTTTGAATATGCGGAAGATTACGCCGGTAACTCCATTGTTGCTTTTTTTATCCGTGATGGTCGTCTGtt < 2:135170‑M2/81‑1 (MQ=255) ctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTACCTCCACTGTGGCATTTACCACCCGTGCTGGTCGTCTGTGTCCTCTgc > 2:140150‑M2/55‑143 (MQ=255) gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc < 2:22347‑M2/95‑1 (MQ=255) acatcgagtcatcggcacgtttcttttaagacgacgactgcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcg < 2:113118‑M2/96‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCCCGCCGGTAACTCCACTGTGGCATTTACCCTCCGTGATGGTCGTCTGTTTCCTCTgcgtgagcgtg > 1:675184‑M2/46‑143 (MQ=255) tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActctgcgtgagctgga > 1:442553‑M2/45‑139 (MQ=255) tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtga < 1:205304‑M2/99‑1 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGACTGTATACTCTGCGTGAGCGTGAAc > 1:454339‑M2/43‑143 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAc < 2:647112‑M2/101‑1 (MQ=255) agcatcggcacgtttctttgaagacgacgactgtctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTg < 1:741561‑M2/103‑1 (MQ=255) gcacgtttctttgaagacgacgactgcctgcagCTCCAGCGTCTTCTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtt < 1:161481‑M2/110‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGACcgcaa > 1:560537‑M2/34‑141 (MQ=255) ctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTa > 1:361961‑M2/7‑143 (MQ=255) cTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCGACTGTGGCATTTACCATACGTGATGGTCGGCGGTTTACTCTGCGTGAGCGTGATCTGCCCGCTTCTGGTGAATAACGTATGCAAACCCATAACCAGt > 1:571033/1‑143 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001510‑4001792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |