New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4513647 | 49 (0.910) | 5 (0.100) | 5/254 | NT | 9.2% | coding (662/903 nt) | fecB | ferric citrate ABC transporter periplasmic binding protein |
? | NC_000913 | = 4513662 | 51 (0.980) | coding (647/903 nt) | fecB | ferric citrate ABC transporter periplasmic binding protein |
CTGTCGACCGAAGCAACCTGCTGCTTCTGCGCGGCGGTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCC > NC_000913/4513506‑4513788 | cTGTCGACCGAGGCAACCTGCGGCTTCTGCGCGGCGGTTAACAGCTGCCCGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAg < 2:904256/143‑1 (MQ=255) gcggAAGCAGCCTGGTGCTTCGGCGCGGCGGTTAGCATCTGCCGGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGAt < 2:22358/140‑1 (MQ=255) aCCGAAGCAACCTGCTGCTTCTGCGCGGCGGTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGAt > 1:795987/1‑143 (MQ=255) gAAGCAACCTGCTGCTTCTGCGCGGCGGTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGa < 2:258413/143‑1 (MQ=255) gAAGCAACCTGCTGCTTCTGCGCGGCGGTTAACATCTGCCAGAGCGGATATTGTTGCCAGCGTTTAACAATGCTCTCTTCGAGATAGAGGGCAACCAGCAGCCAGGCAGGATTGACGAGCAGCAGTTGC‑TCCAGGCCGAAGGa > 2:1021363/1‑143 (MQ=255) ccTGCTGCTTCTGCGCGACGATTAGCGTCTGCCAGAGCGCATCTCGTTGTCTGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAtgccgtccatcggcctg < 1:391239‑M1/143‑18 (MQ=255) ccTGCTCCTTCTTCGCGGCGGTTAACATCTGTCAGAGCGGAGCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCAtg > 2:778897‑M2/1‑141 (MQ=255) gctgccTCTGCGCGGTGGTTAACATCGGCCAGAGCGGATTTTGTTGCCAGCGTTTAACATGGCTCTCTTCGCGATATTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGCGTCCAtgccatccatcggcctgga < 2:914991‑M1/143‑20 (MQ=255) gcggcgGTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGCGTCCAtgccgtccatcggcctggagcaactgctgg < 2:708381‑M1/143‑31 (MQ=255) gcggcgGTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCGCTTCTCGATCGTGGGCAACCAGCAGCCAGGCAGGATTGAGCGCAAGCAGGTGC‑TCCAGGCGGGTGGACGGCAGGGACGCGCGCGCCAt > 2:88523/1‑143 (MQ=255) ggcggTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCAAGCAGTCGC‑CACAGGCCGATGGACGGCATGGACGCACGCGGCGTCg > 1:217153/1‑143 (MQ=255) cggTTAACATCTGCCCGAGCGGATCTTGTTGCCAGCGTTTAACGATTCTCTCGTCGCGATAGCGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGTCCGATGGACGGCATGGACGCACCCGCCATCGCa < 1:1010382/143‑1 (MQ=255) cggTTAACATCTGCCAGGGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCa < 2:1054580/143‑1 (MQ=255) cggCTAACCTCTGCCAGAGCGGAGCCTGTTGGCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAGCCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCa < 1:904814/143‑1 (MQ=255) ggTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTATTAGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGA‑TCCAGGCCGATGCACGGCACGGGCGCACCCGCCAACCCAg > 2:189363/1‑143 (MQ=255) tAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCACCGCCGCgg > 2:243505/1‑143 (MQ=255) cATCTGCCAGCCCGCATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCCGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGTCGCACCCGCCATCGCAGCGGGaa < 1:821381/143‑1 (MQ=255) ttCTGCCAGTGTGGTCCTCGTTGCCAGCGTTTCACAAGGCTCTCTTCGCGATCGTGGGCGACCGGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAAc < 2:604447/142‑1 (MQ=255) tGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCACCCAGCAGCCAGGCAGGATTGCCCGCCAGCAGTTGC‑TCCCGGCCGATGGACCGCATGGCCGCACCCGCCGCCGCCGCGGGAACGtt > 2:281279/1‑143 (MQ=255) agagCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTGCAGc > 2:168298/1‑143 (MQ=255) agCGGATCTTGTTGCCAGCGTTTAACGATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTGGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGccc < 1:382923/143‑1 (MQ=255) cgtgttgCCAGCGTTTAACAATGCTCTCTGCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCagagag < 1:72418/141‑1 (MQ=255) ttgttgCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCACCGCAGCGGGAACGTTCAGCCCCAGAGAgg > 2:479019/1‑143 (MQ=255) tgttgCCAGCGTTTAACAATGCTCTCTTCGCGCTAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGCTCGACGGCATGCACGCACCCGCCATCGCAGCGGCGACGTTCAGCCCCCCAGAGGc > 1:903940/1‑143 (MQ=255) tgttgCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGCGAGGc > 1:298182/1‑143 (MQ=255) ttgCCAGCGTTTAACACTGCTCTCTCCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCa < 1:253332/143‑1 (MQ=255) cAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCAc > 1:758824/1‑143 (MQ=255) gCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGCCCGCCAGCAGTTGC‑TCCAGGCCGCTGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCCGCCCCCGACCGGACAgcgcgc > 1:262597/1‑143 (MQ=255) ttAACAGCGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCATGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGcc < 2:274700/143‑1 (MQ=255) gtAACAATGCTCTCTGCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGCCCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCCCCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGcc < 1:982309/142‑1 (MQ=255) aaCAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCgg > 2:848082/1‑143 (MQ=255) aaCAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATCGACGCACCCGCCATCGCAGCGGGCGTGTACAGCCCCAGAGAGGCCAGCACGccgccgc > 2:789661/1‑142 (MQ=255) cAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGGGAGGCCCGCACGCTTCCGGTc > 1:77132/1‑143 (MQ=255) cAACGCTCCCTGCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTc < 1:502277/143‑1 (MQ=255) aaTGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTcc < 2:435175/143‑1 (MQ=255) tctctTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCCGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGtc > 1:27514/1‑143 (MQ=255) ctcggcgcgCTAGTGGGCACCCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGtct < 2:481751/138‑1 (MQ=255) ttCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCt < 1:1012309/143‑1 (MQ=255) ttCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCt < 1:972137/143‑1 (MQ=255) ttCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCAGGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCt < 2:795987/143‑1 (MQ=255) aTAGGGGGCAACCAGCAGCCAGGCAGGAGTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTAt < 2:856222/143‑1 (MQ=255) tAGTCGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATg < 1:567283/143‑1 (MQ=255) gTGGGCCACCAGCAGCCAGGCAGGAGTGCCCGCCCGCGGTTGC‑TCCAGGCCGATGGACGGCATGGACTCACCTGCCATCGCAGCGGGAGCGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCa < 2:316242/143‑1 (MQ=255) ggCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAtgccgtccatcggcctggagc > 2:658959‑M1/1‑44 (MQ=255) ggCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAtgccgtccatcggcctggagc < 1:658959‑M1/65‑22 (MQ=255) aaCCAGCAGCCAGGCAGGATTGACCGCCAGCAGTAGA‑TACAGACCGAGGTAGGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCACAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGGTGa > 1:292995/1‑143 (MQ=255) aCCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGaa < 1:672317/143‑1 (MQ=255) cagcCAGGCCGCATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCTGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCt < 2:191847/143‑1 (MQ=255) cagcCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCt > 1:604741/1‑143 (MQ=255) gcCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGTACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGCGTATGCAGGTTGAATTGCTGt > 1:550881/1‑143 (MQ=255) gcCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCCGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGt > 1:996093/1‑143 (MQ=255) ccAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCTCCATCGCAGCGGGAACGTTCAGCCACAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGtt > 2:523947/1‑143 (MQ=255) ggcaggATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTCGAATTGCTGTTcgc > 1:911853/1‑143 (MQ=255) ggATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGCCGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGa < 2:836663/143‑1 (MQ=255) ttGACCGCCAGCCGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGAtgt < 1:923152/143‑1 (MQ=255) ggggccgcccgcAGGTGC‑CCCACGCCGATGGACGGCATGGACGCCCCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGAtgt < 2:904175/139‑1 (MQ=255) ccAGCAGTTGC‑TCCAGGCCGATGGACGGCAtggacgcaactgctggcggtcaatcctgcctggctgctggttgcccactatcgcgaagagagcattgttaaacgctggcaacaagatccgctctggcagatgttaaccgccgc < 2:708381‑M2/143‑114 (MQ=255) gC‑TCCAGGCCGATGGACGGCAtggagcaactgctggcggtcaatcctgcctggctgctggttgcc < 1:658959‑M2/65‑45 (MQ=255) gC‑TCCAGGCCGATGGACGGCAtggagcaactgctggcggtcaatcctgcctggctgctggttgcc > 2:658959‑M2/1‑21 (MQ=255) tCCAGGCCGATGGATGGCAtggacgcaactgctggcggtcaatcctgcctggctgctggttgcccaatatcgcgaagagagccatgttaaacgctggcaacaaaatccgctctggccgatgttaaccaccgcgcagaggcagc < 2:914991‑M2/143‑125 (MQ=255) cAtgccgtccatcggcctggagcaactgctggcggtcaatcctgcctggctgctggttgcccactatcgcgaagagagcattgttaaacgctggcaacaagctccgctctgacagatgttaaccgccgcgaagaaggagcagg > 2:778897‑M1/1‑2 (MQ=255) cAGGCCGATGGACGGCAtggagcaactgctggcggtcaatcctgcctggctgctggttgcccactatcgcgaagagagcattgttaaacgcagacaacgagatgcgctctggcagacgctaatcgtcgcgcagaagcagcagg < 1:391239‑M2/143‑127 (MQ=255) | CTGTCGACCGAAGCAACCTGCTGCTTCTGCGCGGCGGTTAACATCTGCCAGAGCGGATCTTGTTGCCAGCGTTTAACAATGCTCTCTTCGCGATAGTGGGCAACCAGCAGCCAGGCAGGATTGACCGCCAGCAGTTGC‑TCCAGGCCGATGGACGGCATGGACGCACCCGCCATCGCAGCGGGAACGTTCAGCCCCAGAGAGGCCAGCACGCTGCCGGTCCAGGTCTCCTGAGTATGCAGGTTGAATTGCTGTTCGCGTGATGTGCCAAAGGCCACGCGTGTCC > NC_000913/4513506‑4513788 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |