| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1550509 = | 50 (0.930) | 3 (0.060) | 3/248 | NT | 5.9% | coding (49/885 nt) | fdnH | formate dehydrogenase N subunit beta |
| ? | NC_000913 | 1550536 = | 49 (0.960) | coding (76/885 nt) | fdnH | formate dehydrogenase N subunit beta | |||||
AACTCGCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATAACCCCGCCGATCTGA > NC_000913/1550395‑1550677 | agcTCGCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTa < 1:825490/141‑1 (MQ=255) aCTCGCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTCCGGAAACGCACGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTAc < 1:150299/143‑1 (MQ=255) gCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGCGGGCGAACAAATGTCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAg < 1:144615/143‑1 (MQ=255) aaaCGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGCCCGCAACTAACTCCATCACGCCGCCTTC‑TCCGGTGCGTCATTACAAAGCa > 2:493046/1‑143 (MQ=255) ccGGAATATAAGGCGGTCGTGGGCAACTGCGAGATGGCGTAAGGGGGCTAACAGATGGCTATGGAAACGCAGGACATTATGAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGt < 2:282220/143‑1 (MQ=255) cacttcatcacggatgtcgttccactccgaacacgccacctgacaggctttacagccgatacaggtggaaacgtcgataagttttgcgacttctgctttgtaATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGt > 1:131824‑M1/103‑143 (MQ=255) cGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTc > 2:256908/1‑143 (MQ=255) cGGAAGAGAAAGCGTGCGTAGGCAACAGCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTc < 1:588419/143‑1 (MQ=255) gAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCACCTAACCCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGc < 1:544485/143‑1 (MQ=255) cGTTCTTAGTCAACATCGCGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATc < 2:694937/143‑1 (MQ=255) ttCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATGAGCAAAAGGACCGCAACTAACACCATCACGCCGCCTTC‑TCAGGTGCGTGATTACGAACCAGAAGTCCCCAAACATATCgg > 2:415276/1‑142 (MQ=255) ttCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCGATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCGAAACTGATCgg > 1:828087/1‑142 (MQ=255) ttAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGTAAACGCAGGTACTTATCCACATGTCCGCAAATAACGCCATCACGCAGCCTTT‑GCAGGGACCGGACTACAAAGCTGCAGCGGCAAAGCTTATCAAcct > 2:530583/1‑141 (MQ=255) tAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGtt < 2:823918/143‑1 (MQ=255) ctaCATCGATAAGGCGTAAGTGGGCGAACAGATGGCTATGGAAACGCAGGACATGATCAAAAGGTCGGTACATAGCTTCTTCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCa < 1:396194/141‑1 (MQ=255) aaCATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCACAACTTAGCGACGTTTCCAc > 2:827513/1‑143 (MQ=255) tccgaacacgccacctgacaggctttacagccgatacaggtggaaacgtcgataagttttgcgacttctgctttgtaATCACGCCGCCTTC‑TCAGGTGCGTGATTACaa > 2:585514‑M1/78‑109 (MQ=255) tccgaacacgccacctgacaggctttacagccgatacaggtggaaacgtcgataagttttgcgacttctgctttgtaATCACGCCGCCTTC‑TCAGGTGCGTGATTACaa < 1:585514‑M1/32‑1 (MQ=255) aTCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTCATCAGG‑CCGCGATTACAAAGCAGAAGCCGCAAAACTTCTCGACGTTTCCCCCTg > 1:766385/1‑143 (MQ=255) aTCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATCACAAAGCAGAAGTCGCAAAACGCATCGACGTTTCCACCTg > 1:416494/1‑143 (MQ=255) agaAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATc > 2:941082/1‑143 (MQ=255) aaGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCgg > 1:863331/1‑143 (MQ=255) aGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTACCTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGc < 1:787474/143‑1 (MQ=255) tgTAAGGGGGCGAACAGAGGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGt < 2:211218/142‑1 (MQ=255) gTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTa > 2:650519/1‑143 (MQ=255) cggCGACCAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCt < 1:324795/142‑1 (MQ=255) ggCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACAAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCGACCTGTATCGGCTGTA‑GAGCCTg > 1:665543/1‑143 (MQ=255) aCAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCggg > 1:834786/1‑143 (MQ=255) aTGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAGCTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGc < 1:218526/143‑1 (MQ=255) ggCTATGGAAACGCGGGACATTATCAAAAGGTCCGCAACTAACGCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCgt < 2:201292/143‑1 (MQ=255) ctGGAAGCGCAGGACATTATCAAAAGGTCCGCAACTAACTCCAGCACGCCGCCTTC‑TCAGGTGCGTGAGTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTc < 2:1022544/142‑1 (MQ=255) ggAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTCGATCGGCTGTA‑AAGCCTGTCAGGTGGCGGGTTCgg > 2:866947/1‑143 (MQ=255) ggAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGACTTG‑TCAGGTGCGGTATTAAAGAGCAGAAGTCGCACAACTTATCGACGTTTCCACCTGTATCGGCTGTC‑AAGCCTGTCAGGTTGCGTGCTCgg > 2:747625/1‑143 (MQ=255) aCGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGGGCGTGATTACAAAGCAGACGTCGCAACACTTATCGACGTTTCCACCTGTATCGACTGCA‑CAGCCTGTCGGGCGGCGTGTCCgctgtg > 2:610629/1‑138 (MQ=255) cGCAGGACATGATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTGCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTgg < 2:26902/143‑1 (MQ=255) cAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAGGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGaa < 1:333135/143‑1 (MQ=255) aGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAAc > 1:537404/1‑143 (MQ=255) gACATTATCAAAAGGTCCGCAACTAAATCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGa > 2:325445/1‑143 (MQ=255) aTCAAAAGGTCCGCAACTAACGCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCg < 2:761589/143‑1 (MQ=255) cAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAGAAACCAGACCTGT‑GCGTGTTCGGAGTGGAACGACATCCggg > 1:192992/1‑141 (MQ=255) cAAAAGGGCCGCAACTAACTCCATCACGCCGCCTAC‑TCAGGTGCGTGATTACAGAGCAGAAGGCGCAAAACTTATCGACGTTTCCACCTGTCTCGGCTGTA‑GAGCCTGTCAGGTGGCGTGTTCGAGGGGGAACGCCATCCCtg > 1:402489/1‑143 (MQ=25) aaaaGGTCCGCAACTAACTCCATCCCGCCGCCTTC‑TCAGGTGCGTGATTACCAAGCAGAAGTCGTTTGAACTCTGGTGTGTTCCACCTGTCTCGGCTGTA‑ACGCCTGTCAGGTGGCGTGTTCGGAGTGGGACGACATGCGtgg > 1:243779/1‑142 (MQ=19) aacggTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGtgat > 2:805210/4‑143 (MQ=255) aaaGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGCCGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGtgat < 1:212370/143‑1 (MQ=255) aaaGGTCCGCAACTAACTCCAGCACGCCGCCGTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAGACTTATCGACGTTTCCACCGGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGtgat < 2:772976/143‑1 (MQ=255) acttctgctttgtaatcacgcacctgagaaggcggcgtgatTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTg > 1:131824‑M2/42‑143 (MQ=255) tgaactgactCCTTCACGCCGCCTTT‑GCAGGTGCGGGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTAGCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGCCATCCGTGATGAAGTggg < 2:644052/141‑1 (MQ=25) gaactCCATCACGCCGCCTTT‑TCAGGTGTGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCGCCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACt < 2:325006/142‑1 (MQ=255) actCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGACGTGGGGCACTGc > 2:395237/1‑143 (MQ=255) ttgtaatcacgcacctgagaaggcggcgtgatTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGa > 2:585514‑M2/33‑109 (MQ=255) ttgtaatcacgcacctgagaaggcggcgtgatTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGa < 1:585514‑M2/77‑1 (MQ=255) tCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGt > 2:941401/1‑143 (MQ=255) cATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGGGGAACGACATCCGTGATGAAGTGGGGCACCGCGTCg > 2:672394/1‑143 (MQ=255) TCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCATGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCggg > 1:547956‑M1/1‑143 (MQ=255) gcgcggtcTTC‑TCGGGTGCGTGATTACAAAGCAGAAGTCGCAACACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGt < 2:528057/136‑1 (MQ=255) cgccgcCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTCCCACCTGTATCGGCTGTG‑AAGCCTGTCACGTGGCGGCTTCGGCGGGGTCCCCCAGCCGTCATGAAGAGAGGCCGTGCGGCtggggt > 2:218106/1‑141 (MQ=255) ttC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATa > 1:911639/1‑143 (MQ=255) tc‑tcAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGGATCGGCTGGA‑AAGCCTGTCAGGTGGCGTGTTCGGGGTGGAGCGACCTCCGTGATGACGGGGGGCGCCGGGTCGGGGTTTACGATac > 1:968250/1‑142 (MQ=25) gTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATAACCccgc > 2:196646/1‑143 (MQ=255) tGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGGTTCCACCTGTATCGGCTGTA‑CAGCCTCTCAGCTGGGGTGTTCGGAGGGGAACGACATCCGTGATGAAGTGGGGCACTGGGTCGGGGTTTACGATAACCccgac > 2:318271/1‑141 (MQ=255) tTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATAACCCcgccgacagga > 2:542878‑M2/2‑138 (MQ=255) | AACTCGCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAAGGGGGCGAACAGATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTC‑TCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTA‑AAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATAACCCCGCCGATCTGA > NC_000913/1550395‑1550677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |