| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2049991 = | 52 (0.970) | 3 (0.060) | 3/252 | NT | 5.9% | coding (5054/7077 nt) | yeeJ | inverse autotransporter adhesin |
| ? | NC_000913 | 2050006 = | 45 (0.870) | coding (5069/7077 nt) | yeeJ | inverse autotransporter adhesin | |||||
AGCGTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACA > NC_000913/2049864‑2050148 | aGCGAGAACAATTGTGGCGCCACTGATACGAAACAGGTGACTCTGATTGCCGATGCTGGCACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCAc < 1:218068/143‑1 (MQ=255) gtgcttgtcacaagaatttcagcgaaaccccgatcatccgtttcaacgctggtgctgcttagcgtgacggaggttccgcggaaattaacttttatgccttctaccgggttgccgttagcgtcagTGACGGCAAGCGTCACTGa > 1:826243‑M1/125‑143 (MQ=255) gTGCACGATTATGGTGTCAGTGATACGAAGCAGGTGACTTGGATCGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGa < 2:726304/143‑1 (MQ=255) gTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGa < 2:1036117/143‑1 (MQ=255) tGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTACTTAACCTCTGTATACTCATTCGTCGTCGGCACGACCGAGGGCGCAACCATGACGTCCAGCGTCCCTCAc > 2:931257/1‑143 (MQ=255) tGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTACGATTGGTTATGCCTGGACCGCAAAGCGAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGAc < 1:718583/143‑1 (MQ=255) aaCAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCAGTGACGc < 2:277811/143‑1 (MQ=255) aCAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCCAGCGTCACTGACGCt > 2:336634/1‑143 (MQ=255) aCAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATCACGGCCAGCGTCCCTGACGcc > 2:39980/1‑142 (MQ=255) gtGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTGGCCGCCTTAACCTCTGTATACTGATTCGTCGTGAGCACGACCGAGGGCGCAACCATGGCGGCAAGCGTCACTGACGCTAACGGc < 2:133447/142‑1 (MQ=255) ggTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTCTACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCaa > 2:187740/1‑143 (MQ=255) cAGTGATACGAAACCGGTGACGTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCgg < 2:282674/143‑1 (MQ=255) aGTGAGACGAAACAGGTGACTCTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGt < 2:26635/143‑1 (MQ=255) gTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACg < 2:369148/132‑1 (MQ=255) gTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACg > 1:369148/1‑132 (MQ=255) aTACGAAACACGTGACTTTGATGGCCTATGCTGCTACCGCAAACCTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGaa < 2:385883/143‑1 (MQ=255) tgtcTTTGTTTTCCGATGCTGGCACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGtt < 1:811531/140‑1 (MQ=255) gaatttGATCGCCGATGCTGGCACCGCAAAACAAGCCTCCTGAACCCGTGTATACTCATTCGACGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAATCCGGTAGAAGGCATAAAAGTTa < 1:807951/140‑1 (MQ=255) aCTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTaa > 2:724677/1‑143 (MQ=255) ttGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAAttt > 1:504543/1‑143 (MQ=255) aTTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCcg < 2:500356/143‑1 (MQ=255) ttGCCGATGCTGGTGCCGGAAAACGAGCCTCCTTAACCTCTGTATACTCATGCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCcgc < 2:809751/143‑1 (MQ=255) ttGCCGAGGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCcgc < 1:863064/143‑1 (MQ=255) gCCGGTGCTGGTACCGCAACACACGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCgg < 2:884586/143‑1 (MQ=255) gCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCgg < 2:235614/143‑1 (MQ=255) ccGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCAGGTAGAAGGCGTACAAGTTAATTTCCGCGGa > 1:656324/1‑143 (MQ=255) tGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGCCCACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGCACCTCCg > 2:743587/1‑143 (MQ=255) ggTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGAAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGt > 1:809356/1‑143 (MQ=255) gTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTc > 1:879817/1‑143 (MQ=255) aCCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCAc < 2:479997/143‑1 (MQ=255) cGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCACCCATGACGGCCAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATGAACGTTAGTTTCCGCGGAACCTCCGTCACGc > 2:546852/1‑143 (MQ=255) cTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCTATTACGCCTTCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAagcag < 1:241285/143‑1 (MQ=255) tAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGAGTCACAGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAagcagc > 2:126322/1‑143 (MQ=255) cctcctTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTATCGGCAACCCGGCAGAAGGCATAAAAGTTAATTTCCCCGGCACCCCCCTCCCGCTAACCAGcccc > 2:962760/1‑143 (MQ=255) cctcctTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCAcc > 2:546747/1‑143 (MQ=255) cctTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGc > 1:643009/1‑143 (MQ=255) aCCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCCGCACCAGCGTTGa > 2:476103/1‑143 (MQ=255) tctGAACACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAAc < 1:22023/143‑1 (MQ=255) gTATACGCATTCGTCATCCCCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACGGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGga < 2:862688/143‑1 (MQ=255) taacttttatgccttctaccgggttgccgttagcgtcagTGACGGCAAGCGTCACTGAc > 1:492196‑M1/40‑59 (MQ=255) taacttttatgccttctaccgggttgccgttagcgtcagTGACGGCAAGCGTCACTGAc < 2:492196‑M1/20‑1 (MQ=255) taCTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTACGCAGCACCAGCGTTGCAACGgttgc > 1:397705/1‑142 (MQ=255) taCTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCCGCACCAGCGTTGAAACGgatga > 1:33341/1‑143 (MQ=255) taCTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGgatga > 1:458546/1‑143 (MQ=255) tCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCg > 1:31473/1‑143 (MQ=255) tCATTCGTCGTCAGCACGACCGAGGACGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAACAGCAACCGAGTTTAAACGGAGGAACg > 2:354095/1‑143 (MQ=255) tcgtcAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTGCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTc < 1:227063/143‑1 (MQ=255) cACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTgcca > 1:45973/1‑140 (MQ=255) gACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTCACACCGATGACCGCGGTTTCGCtaatactc > 1:801909/1‑136 (MQ=255) gcgcAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACa > 1:579227/1‑143 (MQ=255) cgcAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACaa < 2:857762/143‑1 (MQ=255) gcAACCATGACGGAAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAg < 2:809356/143‑1 (MQ=255) cAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGc < 1:115732/143‑1 (MQ=255) gtcagtgacgcttgccgtcaCTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTa < 2:492196‑M2/39‑1 (MQ=255) gtcagtgacgcttgccgtcaCTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTa > 1:492196‑M2/21‑59 (MQ=255) tcagtgacgcttgccgtcaCTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCAc > 1:826243‑M2/20‑143 (MQ=255) ttaGCGTCAGTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGa > 1:470303/3‑143 (MQ=255) cAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAGACGGATGATCGGGGTTTCGCTGAAATTCTTGTGAGAAGCACCGAGGTCGGa > 1:318542/1‑143 (MQ=255) aGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACt < 2:643009/143‑1 (MQ=255) tcaCTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGaaa > 1:1036990‑M2/4‑143 (MQ=255) cTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCATTGTTACGGCTTATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACa < 1:39980/143‑1 (MQ=255) cTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTAAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACa < 1:336634/143‑1 (MQ=255) | AGCGTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACA > NC_000913/2049864‑2050148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |