New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3998036	47 (0.870)	5 (0.090)	5/258	NT	9.0%	coding (54/2163 nt)	uvrD	ssDNA translocase and dsDNA helicase ‑ DNA helicase II
	?	NC_000913	= 3998077	55 (1.040)					coding (95/2163 nt)	uvrD	ssDNA translocase and dsDNA helicase ‑ DNA helicase II

CGTTGCGCTTCTCCGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATCGTATCGGGCAACTGATGGG  >  NC_000913/3997940‑3998218                                                                                                                                           |                                                                                                                                              cGTTGCGCTTCTCCGCTCAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCGTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTg                                                                                                                                          <  1:727206/143‑1 (MQ=255) cGTTGCGCTTCTCCGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGCGCCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTg                                                                                                                                          <  1:339332/143‑1 (MQ=255)    cgcgcTTCGCCGCCCAATCTATTTTTACGCGGCGGTGCCAATGGGCGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTa                                                                                                                                       <  2:886629/142‑1 (MQ=255)         ctctcCGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGTGTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGAcg                                                                                                                                  <  1:985950/142‑1 (MQ=255)            tcCGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGAc                                                                                                                                   <  1:112878/139‑1 (MQ=255)            tcCGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGAc                                                                                                                                   >  2:112878/1‑139 (MQ=255)              cGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGTTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGt                                                                                                                             >  1:449341/1‑143 (MQ=255)                  cAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTg                                                                                                                         <  1:1050649/143‑1 (MQ=255)                  cAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACCCGCGGAccg                                                                                                                         >  2:209839/1‑141 (MQ=255)                  cAACCTAGTTCTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTg                                                                                                                         <  2:523692/143‑1 (MQ=255)                    aCCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGt                                                                                                                       <  1:834910/143‑1 (MQ=255)                      cTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGCAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGc                                                                                                                     >  1:966763/1‑143 (MQ=255)                             gaCGCGGCGGGGCCAATGGACGTGTCGTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCCCGCAGCAACCTGCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTAt                                                                                                              <  2:790688/142‑1 (MQ=255)                                gcggcgGTGCCAATGGACGTTTCATACCTGCTCGACAGCCTTAATGACCAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCAGGCCGTGGTAAGACACGAGTACTGGCGCATCGAATCGc                                                                                                           >  2:49323/1‑143 (MQ=255)                                   gcggTGCGAACGGACGTTGCCTACCTGCTCGACGGCCTGAATGACAAACAGCGCGGAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTg                                                                                                        <  2:493203/143‑1 (MQ=255)                                   gcggTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTg                                                                                                        <  1:774820/143‑1 (MQ=255)                                        gCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTtga                                                                                                   <  1:964758/143‑1 (MQ=255)                                                     gcTTACCTGCTCGACAGCCTTAATGTCAACCAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGaaaa                                                                                      <  2:311590/142‑1 (MQ=255)                                                       ttACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGGGTGGAAAACt                                                                                    >  1:751442/1‑143 (MQ=255)                                                           cTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTc                                                                                >  2:243484/1‑143 (MQ=255)                                                           cTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTc                                                                                >  1:104577/1‑143 (MQ=255)                                                           cTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGACCGCGCCACGCACCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACACGCGTACTGGTGCATCGGATCGCCTCGTTGATAAGCGTGGAAAACCGCtt                                                                                >  2:25717/1‑142 (MQ=255)                                                            tGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCg                                                                               >  1:759777/1‑143 (MQ=255)                                                            tGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAACAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCg                                                                               >  1:446758/1‑143 (MQ=255)                                                             gcccGACAGCCTTAATGACAACCAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGc                                                                              <  2:357642/140‑1 (MQ=255)                                                             gCTCGACAGCCTTAATGACAAACAGCGCGACCCGTTTGTCGCGCGACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGGGCGTGGAACACTGCTctc                                                                              >  1:448279/1‑141 (MQ=255)                                                                 gACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGCTGAGCGTGGAAAACTGCTCGCCATa                                                                          >  1:730783/1‑143 (MQ=255)                                                                  aCAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGACACGCAGCAACCTTCTGGGGCTGGCG‑GTCGCGGGCGGTGGTACGACGCGCGTACTGGTGCAACGTAGCGCCAGGGACGTCACCGGGGAAAACTGCTCGCCCTAc                                                                         >  2:15664/1‑143 (MQ=255)                                                                    tgctttAATGACAAAGAGCGCGTAGCGGTTGCCGCGCCATGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCTTACTGGTGCATCGTATCGCCGTGTTGATGAGCGTGGAAAACTGCTCGCCATACTc                                                                       <  2:62526/139‑1 (MQ=255)                                                                         tAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGGTGATGAGAGTGGAAAAATGCTCGCCAGAccccagta                                                                  >  2:625006/1‑136 (MQ=255)                                                                            tGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGGACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGGTTATgg                                                               >  1:836208/1‑143 (MQ=255)                                                                             gACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGCTGATGAGCGTGCAAACCTGCTCGCGATCCTCGGTAATGGc                                                              >  1:352348/1‑143 (MQ=255)                                                                              ccAAACATCGCGAAGCGGTGGCCGCGCCACGCAGCGACCTTCGGGTGCTGGGG‑GGCGGGGGCAGTGGTGAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCg                                                             <  2:715580/142‑1 (MQ=255)                                                                               cAAACAGCGCGGAGCGGGGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCgg                                                            <  2:50699/143‑1 (MQ=255)                                                                                 aaCAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCAGACCCGCGCACGGCGGTg                                                          >  2:115739/1‑143 (MQ=255)                                                                                   ccgcgcGAAGCGGGCGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGGGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGAc                                                        <  2:425113/141‑1 (MQ=255)                                                                                      cgcgAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGtt                                                     >  1:156872/1‑143 (MQ=255)                                                                                      cgcgAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGtt                                                     <  1:127197/143‑1 (MQ=255)                                                                                               gTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGcaccgcttcgcgctgtttgtcattaaggctgtcgagcaggtaagaaacgtccattggcaccgccgcgtaaaaataggttgggcggagaagcgcaacgcc                                            <  2:647712‑M2/143‑100 (MQ=255)                                                                                               gTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACcaacaa                                            >  1:961318/1‑143 (MQ=255)                                                                                                tGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACaaa                                           <  1:836679/143‑1 (MQ=255)                                                                                                tGGCCGCGCCACGCAGCAACCTTCTGGTGCGGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACaaa                                           <  1:813899/143‑1 (MQ=255)                                                                                                  gCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGcaccgcttcgcgctgtttgtcattaaggctgtcgagcaggtaagaaacgtccattggcaccgccgcgtaaaaataggttgggcggggaagcgcaacgccctc                                         <  2:880366‑M2/143‑103 (MQ=255)                                                                                                   ccGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATCCTCGATTACGGCGGGGACGCTTACCAACAAAggg                                        >  2:786973/1‑141 (MQ=255)                                                                                                    cgcgCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACGAAgcgg                                       >  1:1027183/1‑143 (MQ=255)                                                                                                    cgcgCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACGGGTGCATCGTGGGGGCTGGTTGATGAGCGTGGAAGACTGCTCGCCATGCTCGGGTGTGGCGGAGACGGTTACCAGCAAAgcgg                                       >  1:186945/1‑143 (MQ=255)                                                                                                    cgcgCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGCcaccgcttcgcgctgtttgtcattaaggctgtcgagcaggtaagaaacgtccattggcaccgccgcgtaaaaataggttgggcggagaagcccgacgccctccg                                       <  1:346166‑M2/143‑105 (MQ=255)                                                                                                     gcgcCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGcaccgcttcgcgctgtttgtcattaaggctgtcgagcaggtaagaaacgtccattggcaccgccgcgtaaaaataggttgggcggagaagcgcaacgccctccgc                                      <  1:365069‑M2/143‑106 (MQ=255)                                                                                                      cgcCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAgcggcg                                     >  1:883072/1‑143 (MQ=255)                                                                                                         cACGCAGCAACCTTCTGGTGCTG‑CGTGGCGCGGCcaccgcttcgcgctgtttgtcattaaggctgtcgagcaggtaagaaacgtccattggcaccgccgcgtaaaaataggttgggcggagaagcgcaacgccctccgccaaa                                  <  1:774168‑M2/143‑110 (MQ=255)                                                                                                           cGCAGCACGCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGga                                <  2:929434/143‑1 (MQ=255)                                                                                                           cGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGga                                <  1:77722/143‑1 (MQ=255)                                                                                                           cGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGga                                <  1:231418/143‑1 (MQ=255)                                                                                                           cGCAGCAACCTTCTGGGGCGGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGga                                <  2:865810/143‑1 (MQ=255)                                                                                                              agctACCGTCTCGGGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACGCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGAt                             <  2:110967/143‑1 (MQ=255)                                                                                                               gcaACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTCGTTGATGAGCGTGGAAAACTGGTCGCCATACTCATTTATGGCGGCGACGTTTATCCACAGAGCACCTGCGgagtgc                            >  2:928648/1‑140 (MQ=255)                                                                                                                caACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGc                           >  1:194896/1‑143 (MQ=255)                                                                                                                caACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCAACATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGc                           >  1:820738/1‑143 (MQ=255)                                                                                                                 aaCCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCg                          >  2:234883/1‑143 (MQ=255)                                                                                                                      tCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGGCGCGCGTACGGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATc                     <  1:770052/143‑1 (MQ=255)                                                                                                                          gTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGAGGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTGTACCAGCAAAGCGGCGGCGGAGATGCGTCATCGTAt                 >  2:788668/1‑143 (MQ=255)                                                                                                                                  g‑ggcgcgggcAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCACCATCGTATCCGGCacc         >  2:7981/1‑141 (MQ=255)                                                                                                                                        cgggcAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATCGTATCGGGCAACTGATg    <  1:958759/143‑1 (MQ=255)                                                                                                                                          ggcAGTGGTTTGACGCGTGTATTTGTGCATCGTAAGGGCTGGTGGAGGGGCGGGGAAGACGGCTCGCCAGACGCGAGTAGGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATCGTATCGGGCAACTGATggg  <  1:12793/143‑1 (MQ=255)                                                                                                                                           |                                                                                                                                              CGTTGCGCTTCTCCGCCCAACCTATTTTTACGCGGCGGTGCCAATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCG‑GGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATCGTATCGGGCAACTGATGGG  >  NC_000913/3997940‑3998218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.