mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 13 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4041429 = | 65 (1.210) | 3 (0.060) | 3/254 | NT | 4.6% | coding (5/528 nt) coding (571/585 nt) |
mobB mobA |
molybdopterin‑guanine dinucleotide biosynthesis adaptor protein molybdenum cofactor guanylyltransferase |
| ? | NC_000913 | 4041452 = | 61 (1.170) | coding (548/585 nt) | mobA | molybdenum cofactor guanylyltransferase | |||||
| * | ? | NC_000913 | = 3349145 | 73 (1.360) | 3 (0.060) | 3/256 | NT | 4.0% | coding (665/729 nt) | mtgA | peptidoglycan glycosyltransferase MtgA |
| ? | NC_000913 | = 3349179 | 72 (1.370) | coding (631/729 nt) | mtgA | peptidoglycan glycosyltransferase MtgA | |||||
| * | ? | NC_000913 | = 2482967 | 75 (1.390) | 3 (0.060) | 3/254 | NT | 3.9% | coding (373/1164 nt) | emrK | tripartite efflux pump membrane fusion protein EmrK |
| ? | NC_000913 | = 2482980 | 74 (1.420) | coding (360/1164 nt) | emrK | tripartite efflux pump membrane fusion protein EmrK | |||||
| * | ? | NC_000913 | 639556 = | 62 (1.150) | 3 (0.060) | 3/250 | NT | 5.0% | intergenic (+48/‑197) | ahpC/ahpF | alkyl hydroperoxide reductase, AhpC component/alkyl hydroperoxide reductase, AhpF component |
| ? | NC_000913 | 639588 = | 55 (1.070) | intergenic (+80/‑165) | ahpC/ahpF | alkyl hydroperoxide reductase, AhpC component/alkyl hydroperoxide reductase, AhpF component | |||||
| * | ? | NC_000913 | = 572411 | 848 (15.750) | 13 (0.260) | 7/248 | NT | 1.9% | coding (44/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572431 | 526 (10.320) | coding (64/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 572405 = | 927 (17.220) | 11 (0.270) +31 bp |
10/200 | NT | 1.5% | coding (38/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 1095504 | NA (NA) | intergenic (‑67/‑40) | insE‑4/ymdE | IS3 element protein InsE/protein YmdE | |||||
| * | ? | NC_000913 | = 572325 | 2005 (37.240) | 21 (0.420) | 11/242 | NT | 1.1% | intergenic (+74/‑43) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572334 | 1954 (39.290) | intergenic (+83/‑34) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 570695 = | 2224 (41.300) | 43 (0.840) | 20/248 | NT | 2.1% | intergenic (+267/‑198) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570719 = | 1932 (37.910) | intergenic (+291/‑174) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570627 = | 2710 (50.330) | 7 (0.140) | 7/236 | NT | 0.30% | intergenic (+199/‑266) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570677 = | 2218 (45.730) | intergenic (+249/‑216) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | = 569685 | 2378 (44.160) | 4 (0.080) | 4/248 | NT | 0.17% | coding (784/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | = 569701 | 2358 (46.260) | coding (800/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||