New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 341335	58 (1.030)	4 (0.070)	3/254	NT	6.8%	coding (211/1383 nt)	yahJ	putative deaminase with metallo‑dependent hydrolase domain
	?	NC_000913	= 341358	54 (1.000)					coding (234/1383 nt)	yahJ	putative deaminase with metallo‑dependent hydrolase domain

CATGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/341218‑341335 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgCGCCGTGCGGGTCTGCACCGCCACGCCATTTTCGTAGTCAAAACCGGTTTCCAGCAGCACGTTATCGAGATAGTAATGCGGGTCAGTGATTTTCATGGTGTTGTTCGCTTCGCAGTTTAGGGTGCCAGCTACCGCCGCAT  <  NC_000913/341358‑341219                                                                                                                                                                                                                                                                    CATGCGGCCGTAGCTGGCAACCTAAACTGCGAAGGGAATAACACCATGAAAATCACTGACCCGCATTACTATCGCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGCGCCGTGCGGGTCTGCACCGCCACG                                                                                                                     <  2:577507/143‑1       GCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACGGACCCGCATTACTATCTCGATACCGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGCGCCGTGCGGGTCTGCACCGCCACGCCATTT                                                                                                               <  1:532141/143‑1       GCGGGAGCTGGCCCCCTGAACCGCGAAGCGAACCACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAACCCGGTTTTGACTACGAAAATGGCGCGCCGTGCGGGTCTGCACCGCCACGCCATTT                                                                                                               <  1:1054245/143‑1         GGTAGCTGGCTCCCTAAACTGCGGAGCGAACAACACCATGAAAATCCCTGGCCCGCATTACTATCTCGACAACGTGCTGCTGGACACCGGTTTTGACTACGAAAATGGCGCGCCGTGCGGGTCTGCACCGCCACGCCATTTTC                                                                                                             <  2:998089/143‑1                                                                                                              ggccTGGCGTGCCGTGCGCGCCTGCACCGCCAGGCCATTTTCGTAGTCAAAACCGGTTTCCAGCAGCACGTTGTCGAGATAGTGATGCGGGTCAGTGATTTTCATGGTGTTGTTCGCTTCGCAGTTTAGGGTACCAGCTACCG        <  1:65655/139‑1                                                                                                                    GCGCGCCGTGCGGGTCTGCACCGCCACGCCATTTTCGTAGTCAAAACCGGTTTCCAGCAGCACGTTATCGAGATAGTAATGCGGGTCAGTGATTTTCATGGTGTTGTTCGCTTCGCAGTTTAGGGTGCCAGCTACCGCCGCAT  >  2:370692/1‑143                                                                                                                                                                                                                                                                    CATGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/341218‑341335 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgCGCCGTGCGGGTCTGCACCGCCACGCCATTTTCGTAGTCAAAACCGGTTTCCAGCAGCACGTTATCGAGATAGTAATGCGGGTCAGTGATTTTCATGGTGTTGTTCGCTTCGCAGTTTAGGGTGCCAGCTACCGCCGCAT  <  NC_000913/341358‑341219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.