New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 341335	58 (1.030)	4 (0.070)	3/254	NT	6.8%	coding (211/1383 nt)	yahJ	putative deaminase with metallo‑dependent hydrolase domain
	?	NC_000913	= 341358	54 (1.000)					coding (234/1383 nt)	yahJ	putative deaminase with metallo‑dependent hydrolase domain

CCCATGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCATCTCGAC  >  NC_000913/341216‑341499                                                                                                                                               |                                                                                                                                              ccccTGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACACCACCATGAAACTCCCTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGgcg                                                                                                                                               <  1:132130/143‑1 (MQ=255)    aTGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGcgc                                                                                                                                            >  2:370692‑M2/1‑140 (MQ=255)        ggcggTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACGATCACAATTGCGGGCTGCTGGAAACCGGTTTTGACTACGAAAGTGGCGTGGAGGTGGAGACCAGCACGGCGGGCCAGa                                                                                                                                        >  1:810436/1‑143 (MQ=255)          cggTAGCTGGTACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATCACTATCTCGACAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCCTGGCGGTGCAGGCGCGCACGGCAcgccaggcc                                                                                                                                      <  1:65655‑M2/143‑10 (MQ=255)             ttgCTGTCTCCCTAAACTGCGAAGCGAACAACTCCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTg                                                                                                                                   <  2:170518/141‑1 (MQ=255)             gaGCTGGTACCCTAAACTGCGCAGCGAACAACACCATGAAACTCACTGCCCCGCATTACTATCTCGATAACGCGCTGCTGGAAACCGGTCTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTg                                                                                                                                   <  2:50358/142‑1 (MQ=255)               gCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGga                                                                                                                                 <  2:765362/143‑1 (MQ=255)                cTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGgag                                                                                                                                >  1:421684/1‑143 (MQ=255)                      cccTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAg                                                                                                                          <  1:1010035/143‑1 (MQ=255)                        ctcaaCTGCGAAGCGAACCACGCCATGAAAATCACTGACCCGCTTTCCTTCCTCGATAACGTGCTGCAGGAAGCCGTTGTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGa                                                                                                                        <  2:233368/140‑1 (MQ=255)                        cTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGGAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGa                                                                                                                        >  1:289189/1‑143 (MQ=255)                        cTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCCTGGCGCGCCAGACCGTGGAGATTCAGGa                                                                                                                        >  1:782658/1‑143 (MQ=255)                          caaCTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACCACCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCTCGCCAGACCGTGGAGATTCAGGACg                                                                                                                      <  1:391142/142‑1 (MQ=255)                           aacgccgaagcggaCAACCCCGTGAGAACCGCTGACCCGCAGTACTATCGCGATAACGTGCTGCTGGAAACCGGTTTTGCCTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACgg                                                                                                                     <  1:704354/138‑1 (MQ=255)                             ctcgcaagcgacCAACCCCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCa                                                                                                                   <  2:766562/138‑1 (MQ=255)                              cgcgaagcaaaCAACCCCACGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCaa                                                                                                                  <  1:386611/142‑1 (MQ=255)                                  aagcgaaCAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAAtt                                                                                                              <  1:717580/143‑1 (MQ=255)                                  aagcgaaCAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACAACAACTGCTTTCTAGACGGTGGAGATTCAGGACGGCAAAAtt                                                                                                              >  1:461513/1‑143 (MQ=255)                                  aagcgaaCAACACCATGAAAATCACTGACCCACATAACTATCTCGATAACGAGCTGCTGGAAAACGACTCTGACTACGAAAATAGCGTGGCGGCGCAGCCCCGCCCGGAGCGCCCGACCAAAGACATGCAGGACGGCaacact                                                                                                              >  2:80857/1‑139 (MQ=255)                                     cgaaCAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTc                                                                                                           <  1:341590/143‑1 (MQ=255)                                             acCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTgcg                                                                                                   >  2:87750/1‑143 (MQ=255)                                                aTGAAAATCACTGACCCGCATTACTAGCTCGATAACGTGCTGCTGGCCACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCga                                                                                                <  1:804724/143‑1 (MQ=255)                                                 tGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCgag                                                                                               <  1:957178/143‑1 (MQ=255)                                                        cACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGGGGAGATTCAGGACGGCAAAATGGTCGCCCTGCGCGAGAACAAGc                                                                                        >  2:826784/1‑143 (MQ=255)                                                         aCTGCCCCGCACTACTCTCTCGATAACGTGCTGCTGGAAACCGGTGTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCt                                                                                       <  1:106012/143‑1 (MQ=255)                                                           tGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGCGATTCAGGACGGCAAAATTGTCGCCCTACGCGCGAGCCAGCCGc                                                                                     >  2:202577/1‑143 (MQ=255)                                                             aCCCGCATTCCCAGCTCGATAACGTGCTGCTGGAAGCCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCAt                                                                                   <  1:997912/143‑1 (MQ=255)                                                                     tACTATCTCGATAACTTTCTGCTCGATACCCGTCTTGACTACGAGAATGGCGTGGCGGTGCAGTCACGTACGGCTCGCCAGACCGTGTAGCTTCAGCACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGc                                                                           <  2:934198/143‑1 (MQ=255)                                                                     tACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTCCGAAAGTGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGc                                                                           <  2:899226/143‑1 (MQ=255)                                                                         aTCTCGACAAGGTGCTGCTGGAAACCGGTGTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACg                                                                       <  2:118216/143‑1 (MQ=255)                                                                            tcGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCGAAGTCGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTg                                                                    >  2:1073061/1‑143 (MQ=255)                                                                              gttAACGCGCGGCTGGAAACCGGTGTTGACTAGGAACATGGCGGGGCGGTGCAGACCCGCACGGCGCGGCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGcc                                                                  <  2:324091/141‑1 (MQ=255)                                                                              gATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCTGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGcc                                                                  >  2:158636/1‑143 (MQ=255)                                                                               acaaCGTGCGGCTGGAAACCGGTTTTGACGACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCg                                                                 <  2:379141/141‑1 (MQ=255)                                                                                tAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGc                                                                <  2:421684/143‑1 (MQ=255)                                                                                    gTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTa                                                            <  1:87750/143‑1 (MQ=255)                                                                                         gctgGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACg                                                       >  1:217676/1‑143 (MQ=255)                                                                                               acccGGTTTTGACTACCCAAATGGCGTGGCGGTGCATACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCg                                                 <  1:122336/141‑1 (MQ=255)                                                                                               aaCCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCg                                                 >  2:349204/1‑143 (MQ=255)                                                                                               aaCCGGTTCTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCg                                                 <  1:724733/143‑1 (MQ=255)                                                                                                aCCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCgg                                                >  1:403343/1‑143 (MQ=255)                                                                                                     ttttGACTGCGAAAAGGGCGGGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACACTGCCGCACTATGACGCTGGCGGTAAGc                                           <  2:1265/143‑1 (MQ=255)                                                                                                        ggacgacGAAAAGGGAGGGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAGAAGTGCCGGCCTTCGCGAGAACAAGCTGCAGCCGGACGCCACGCTGCCGCACTATTACGCTGGCGGTAAGCTGa                                        <  1:234794/142‑1 (MQ=255)                                                                                                          aCTACGGAAATGGCGGGGCGATGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGAtg                                      <  2:97469/143‑1 (MQ=255)                                                                                                             aCGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGAGCTAGTTTATTACTGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGAtgctg                                   <  1:251696/143‑1 (MQ=255)                                                                                                             aCGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGAGAATATTGTGTTCGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGAtgctg                                   <  1:251768/143‑1 (MQ=255)                                                                                                             aCGAAAAGGGCGTGGCGGCGCAGACCCGCACGGCGCGCCAGACCGTGGAGACTCAGGACGGCAAAATGGTCGCCCTGCGCGAGAACAAGCTGCCTCCGGACGCCACGCCGCCGGACTATGACGCTGGCGGTAAGCTGAtgctg                                   <  2:136443/143‑1 (MQ=255)                                                                                                               gAAAATGGCGTGGCGGTGCAGACCCGCACGGCGcgccattttcgtagtcaaaaccggtgtccagcagcacgttgtcgagatagtaatgcgggccagggattttcatggtgttgttcgctccgcagtttagggagccagctacc                                 <  2:998089‑M2/143‑111 (MQ=255)                                                                                                               gAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACCATGACGCTGGCCGTAAGCTGATGCTGcc                                 >  2:428239/1‑143 (MQ=255)                                                                                                                aaaaTGGCGTGGCGGTGCAGGCACGCACGGCGCGCCAGACCGTGGGGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGACACGCTGCCCCACTATGACGATGACGGTAAGCTGAtgctgagc                                >  2:1040427/1‑140 (MQ=255)                                                                                                                 aaaTGGCGTGGCGGTGCAGACCCGCACGGCGcgccattttcgtagtcaaaaccggtttccagcagcacggtatcgagatagtaatgcgggtccgtgattttcatggtgttgttcgcttcgcagtttagggtgccagctaccgc                               <  1:532141‑M2/143‑113 (MQ=255)                                                                                                                 aaaTGGCGTGGCGGTGCAGACCCGCACGGCGcgccattttcgtagtcaaaaccgggttccagcagcacgttatcgagatagtaatgcgggtcagtgattttcatggtgtggttcgcttcgcggttcagggggccagctcccgc                               <  1:1054245‑M2/143‑113 (MQ=255)                                                                                                                 aaaTGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTTAGCTGATGCTGCcca                               >  1:980246/1‑143 (MQ=255)                                                                                                                   aTGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCGAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCccacc                             >  1:543098/1‑143 (MQ=255)                                                                                                                       cgtggcgGTGCAGACCCGCACGGCGcgccattttcgtagtcaaaaccggtttccagcagcacgttatcgcgatagtaatgcgggtcagtgattttcatggtgttattcccttcgcagtttaggttgccagctacggccgcatg                         <  2:577507‑M2/143‑119 (MQ=255)                                                                                                                       cgtggcgGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGGCGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTCTGAAGCCGGCGGAACGCCGCAGCTGCCC‑CCAcccc                        >  2:901172/1‑142 (MQ=255)                                                                                                                                     cccGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAg                                                                                         >  2:129089/1‑65 (MQ=255)                                                                                                                                     cccGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAg                                                                                         <  1:129089/65‑1 (MQ=255)                                                                                                                                     cccGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCCCCCGCCACACGCACAtt           >  2:226961/1‑143 (MQ=255)                                                                                                                                         cACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTCAGCTGATGCTGCCCACCACCCGCGCCAAGCATATTCAtc       >  2:35666/1‑143 (MQ=255)                                                                                                                                         cACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCAtc       >  1:494408/1‑143 (MQ=255)                                                                                                                                         cACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCGGATGGTGCGCACCACCCGCGACATGCATATTCAtc       >  1:387956/1‑143 (MQ=255)                                                                                                                                              cgcgcCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCATCTCGAc  >  1:700796/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                              CCCATGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCATCTCGAC  >  NC_000913/341216‑341499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.