New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	315260 =	NA (NA)	4 (0.070)	3/252	NT	NA	noncoding (32/1255 nt)	IS3	repeat region
	?	NC_000913	315291 =	NA (NA)					noncoding (63/1255 nt)	IS3	repeat region

AGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGC  >  NC_000913/315119‑315370                                                                                                                                              |                                                                                                               aggcTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                               <  2:961307/140‑1 (MQ=255) aGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                               <  1:1004148/143‑1 (MQ=255)  gCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCATTAGTGGACACGCGGCTAAGTg                                                                                                              >  1:105765/1‑143 (MQ=255)   ccTGAGGTATGACCAGTATGAGGGCGATGAAGTCGGGCTGGTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTGCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa                                                                                                             <  2:63267/143‑1 (MQ=39)       aTGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTaa                                                                                                         >  2:39030/1‑143 (MQ=255)             gagcAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACtctc                                                                                                   <  1:437748/140‑1 (MQ=255)             gAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTCGACACGCGGCTAACTGAGTACCCtctc                                                                                                   >  1:887546/1‑143 (MQ=255)              aaCAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTGTTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGCACACTCtca                                                                                                  >  1:378592/1‑143 (MQ=255)              aaCAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCACTAGTGGACACGCGGCTACGTGAGTAAACTCtca                                                                                                  >  1:432107/1‑143 (MQ=255)                   tattatGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCGCTTACCCAGCAATAGTGGACAAGCGGCTAAGTGAGAAAACTCtcagtcga                                                                                             >  2:418232/1‑141 (MQ=255)                       atGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCTGCTAAGTGAGTAAACTCTCAGTCAGAGGt                                                                                         <  2:906113/143‑1 (MQ=255)                        tGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTg                                                                                        >  2:198512/1‑143 (MQ=255)                            agtGAAGCCGGGCTGTTTGGTAAAGGTAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTc                                                                                    <  2:309348/141‑1 (MQ=255)                               gAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATGTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcaca                                                                                 <  2:746567/143‑1 (MQ=255)                                 aGTCTGGCTCTTTTGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATg                                                                               <  1:421101/143‑1 (MQ=255)                                  ggccggCTGTTTGGTATAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGAGCCGCTTCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGa                                                                              <  2:607609/139‑1 (MQ=37)                                   tCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGAc                                                                             >  1:831015/1‑143 (MQ=255)                                   tCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGAc                                                                             <  2:825400/143‑1 (MQ=255)                                     gggCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGCGGTGACTCACATGACaa                                                                           >  1:779085/1‑143 (MQ=255)                                     gggCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGAGaa                                                                           >  1:1022215/1‑143 (MQ=255)                                          gTTCGGTAAAGATTAGCGCCAGAACGCCCCGCATGCTCTTTCTGCCGAGGTGACCGATACGCCAGTGCCTCTTCCCCAGCAATAGTGGACACGCGGCTAAGTGTGTGATCTCTCAGTCAGAGCTGACTCACATGACAAAAACa                                                                      <  1:136954/143‑1 (MQ=21)                                           tttGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAg                                                                     >  2:1107562/1‑143 (MQ=255)                                               gTAAAGATAGGCGCCAGAAAGAGCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATc                                                                 <  2:173305/143‑1 (MQ=255)                                               gTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGCGACGACCATGGCAAAAAcggactc                                                                 >  2:154153/1‑137 (MQ=25)                                                      tAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAACCTCTCAGTCAGAGGTGACTCAAATGACCAAAACAGTATCAACCAGt                                                          >  2:469631/1‑143 (MQ=255)                                                         gcgcCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACACAGGAATAGTGGACACGTGGTTGAGTGGGAAAACACTGAGTCAGAGGTGACTCACATGACAAAAACAGTATTAACCAGTaaa                                                       >  1:510899/1‑143 (MQ=21)                                                            tcAGAAAGACCCGCATGATATTTCTGACGAGATGACCTATACGCGAGAGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaaaaaa                                                    <  2:972859/142‑1 (MQ=18)                                                              agacagacCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTGTCAACCAGTAAAAAAcc                                                  <  1:716561/143‑1 (MQ=255)                                                              aGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAcc                                                  <  2:536669/143‑1 (MQ=255)                                                               gAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAccc                                                 <  1:39030/143‑1 (MQ=255)                                                                aaaGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACCCACATGACAAAAACAGTATCAACCAGTAAAAAAcccc                                                >  2:251350/1‑143 (MQ=255)                                                                  aGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAACACCCCGt                                              >  2:808710/1‑143 (MQ=255)                                                                     cccGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTaaa                                           >  2:63845/1‑143 (MQ=255)                                                                      ccGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCACCCAGTAAAAAACCCCGTAAAc                                          >  2:1043075/1‑143 (MQ=255)                                                                      ccGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAAc                                          >  1:591468/1‑143 (MQ=255)                                                                      ccGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAATCTCAGTCAGAGGTGACTCACAAGACAAAAACAGTATCAACCAGTAAAAAAACCCGTAAAc                                          >  1:747346/1‑143 (MQ=255)                                                                       cGCATGCTCTTTCTGCCGAGGTGACCTACACGCCAGTGCCTCTTACCCAGCATGCGGCGACACTGGGCTGGGTGACTACACTCCCAGTCAGAGAAGACGCACAGGACAACAACCAGATCAGCCAGGAAAAACCCCCGCAAACa                                         >  2:391288/1‑143 (MQ=255)                                                                       cGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCCATAGTGGACACGCGCCTCAGTGTGTAAACTCTCAGTCAGAGGTGACTCACATGACATAAACAGTATCAACCAGTAAAAAACCCCGTAAACa                                         <  2:897383/143‑1 (MQ=18)                                                                       cGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGCAAACa                                         >  1:433291/1‑143 (MQ=255)                                                                        gCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCCGAGGCGACTCACCTGCCAACAACAGTACCAACCAGTAAAAAACCCCGTAAACAg                                        >  1:366254/1‑143 (MQ=18)                                                                        gCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGCATCAACCAGTAAAAAACCCCGTAAACAg                                        <  1:495055/143‑1 (MQ=255)                                                                             cTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTc                                   >  1:635981/1‑143 (MQ=255)                                                                              tgtttGTGCGGAGGTGAGGTGTACGCCAGTGCCGGGTAGCCAGCAATAGTGGACAGGTGGGTAAGTGAGGAAACGCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCg                                  <  2:331525/141‑1 (MQ=11)                                                                               aTTTCTGGCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGc                                 <  2:977483/143‑1 (MQ=255)                                                                               aTTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGc                                 >  1:629601/1‑143 (MQ=255)                                                                                tttCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCGATAGTGGACACGCGGCTAGGTGAGTAACCTCTCAGTCAGAGGCGACTCACATGACCAAAACAATATCAACCAGAAAAAAACCCCGACACCAGCATTCGcc                                >  2:837765/1‑143 (MQ=255)                                                                                     gCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATCGTGGACACGCGGCTAAGTGAGTACACTCGCAGTCAGAGGCGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAACCCGAAAACAGGATACGCCCGagt                           >  2:467652/1‑141 (MQ=17)                                                                                      ccGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAtt                          >  1:709616/1‑143 (MQ=255)                                                                                           ttGACCTATGCCCCAGTGCCTCTTACCCACCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCa                     <  2:744990/142‑1 (MQ=255)                                                                                           ttGACCTATATGCCAGTACCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCTGATTACTGCATTCGCCTGAATTTCGCa                     <  2:968160/142‑1 (MQ=14)                                                                                           gTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCa                     <  1:1107562/143‑1 (MQ=255)                                                                                             gACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGt                   >  1:5883/1‑143 (MQ=255)                                                                                                cTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACAGGACAAGAACAGTATCAACCAGTAAAAAACCCCGCAAACAGCATTCGCCTCAATTTGGccatgag                >  1:826645/1‑137 (MQ=14)                                                                                                cTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACGCACATGACAAAAACAGTCTCAACCAGGAAAAAACCCCGTAACCAGCACTCGCCTGAATTTCGCAGTGaa                >  1:965725/1‑143 (MQ=14)                                                                                                   taCGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCGCATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGcc             >  1:633097/1‑143 (MQ=255)                                                                                                     cGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAGTGACTTGACAAGAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGCAGCCCt           >  1:415948/1‑143 (MQ=11)                                                                                                     cGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGCATTTCGCAGTGAAGCCCt           >  1:773110/1‑143 (MQ=38)                                                                                                      gCCAGTGCCTCTTACCCAGCAATCGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAATCACATGACAAAAACAGTAGCAACCAGTAAAAAACGCCGTAAACAGCATTCGCCTGACTTTCGCGGTGACGcccgg          >  1:765271/1‑141 (MQ=11)                                                                                                      gCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGCCCAAAACAGTATCAACCACTAAAAAACCCCGTAAACAGCATTGGCCCGAATTCCGCAGTGAAGCCCtc          >  2:499660/1‑142 (MQ=11)                                                                                                      gCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACCACAAAAGGGTGTGTCTGGTAAAAACCCCGTAAACAGCATTCGCCTGACTTTCGCAGTGAAGCCCTg          >  1:511461/1‑143 (MQ=11)                                                                                                      gCCAGGGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAACCTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTg          <  1:197117/143‑1 (MQ=21)                                                                                                        cAGCGCCTCTTCCCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGaa        <  1:525635/143‑1 (MQ=17)                                                                                                          gTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGCCTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCCGTAAAGCCCTGGAGc      >  1:814828/1‑143 (MQ=255)                                                                                                            gCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCtt    >  1:885502/1‑143 (MQ=32)                                                                                                              ctctTACCCAGCAATAGTGAACACGCGGCTAAGTGAGTAAACCCTCAGTCAGAGGTGCCTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGc  <  1:975312/143‑1 (MQ=2)                                                                                                                                              |                                                                                                               AGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGC  >  NC_000913/315119‑315370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.