| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 632332 | 43 (0.760) | 3 (0.050) | 3/258 | NT | 6.7% | coding (151/198 nt) | ybdD | conserved protein YbdD |
| ? | NC_000913 | = 632374 | 42 (0.760) | coding (193/198 nt) | ybdD | conserved protein YbdD | |||||
TCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACTGGCAGGTAATGAATGGACTCC > NC_000913/632191‑632473 | tCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCg < 1:735295/143‑1 (MQ=255) cTGGCGAAAGTCGGAAAATATTTAGGTCAGGCGGCTAAGCTTATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCa < 2:32470/143‑1 (MQ=255) tGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAg > 2:921586/1‑143 (MQ=255) aaaGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgc > 2:928189/1‑143 (MQ=255) gCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGAcgcgcg < 1:313870/143‑1 (MQ=255) ccGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACgcgcgc < 2:930837/143‑1 (MQ=255) cGGAAAATGTTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAGCCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCt < 2:623770/143‑1 (MQ=255) aaTATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTCCggg > 2:566947/1‑142 (MQ=255) gTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAggc < 1:273581/143‑1 (MQ=255) gTCAGGCGGCGAAGCTGATGATTGGTATGCCTGAGTACGACAACGATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCGACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAggc < 1:492980/143‑1 (MQ=255) aGGCGGCGAAGCTGATGAGTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAggcggc < 2:800154/143‑1 (MQ=255) gcggcgAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGgcgc > 1:909720/1‑143 (MQ=255) cggcgAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAGACGCCGATGACCTACGAAGAGTCTTTCCGTGCGCAGCAGGACGCGCGCCACGGTGGAACAGGCGgcgcg > 2:666014/1‑143 (MQ=255) gcgAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCagcagcgcgcgccgccttttccaccgtagcgcgcgtc < 1:120577‑M1/143‑38 (MQ=255) tgatgaTTGGTATGCCTGATTACGACAACTATGTCGAACATCTGCGCGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCagcagcgcgcgccgccttttccaccgtagcgcgcgtcctgccgc < 2:123718‑M1/143‑45 (MQ=255) tgatTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCagcagcgcgcgccgccttttccaccgtagcgcgcgtcctgccgctca < 1:521595‑M1/143‑48 (MQ=255) tgatTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTAAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTGCGGTGGAAAGGGCGGCGCGCGCTGCTGCTaa > 1:63834/1‑143 (MQ=255) ccTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCCGCTAAATCTGtcggtc > 2:955730/1‑138 (MQ=255) cTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCa < 1:928189/143‑1 (MQ=255) aTTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCACACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGc < 1:191769/143‑1 (MQ=255) aTTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAACGGCGGCGCGCGCTGCCGCTAAATTTGTACGTCAGGc > 2:213206/1‑143 (MQ=255) aCGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCttt < 1:534185/143‑1 (MQ=255) gACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGCCTTTCCGTGGGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTACATTTGTACGTCCGGCTCTaa > 1:990153/1‑143 (MQ=255) aCAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTCTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCGACATTCGTACGTCAGGccctaac > 2:1027914/1‑137 (MQ=255) tttGTCGCATATTTGCCGCTTAACCATCCCGATCAAAGTCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGAtt < 2:657002/141‑1 (MQ=255) gTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCa < 1:633914/143‑1 (MQ=255) gAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTGTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCCCTGCTGCTAAATTTGGACGTCAGGCTTTAAACGATTCCACtt > 2:915042/1‑143 (MQ=255) aaCATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTACACCATTCCACtct > 2:256336/1‑141 (MQ=255) atatGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCCGGCCGCTCGCTACTGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACtttttt < 1:1102052/143‑1 (MQ=255) ggTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCt < 2:679504/143‑1 (MQ=255) ggTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCt > 1:321505/1‑143 (MQ=255) aCCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTGCGGTGGAAAAGGCGGCGCGCGCTGCTGCTACATATGTACGTCAGGCTTTCAGCGATTCCACTTTGTTGACGGCTGcccc > 2:622221/1‑140 (MQ=255) aCCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACg > 2:614385/1‑143 (MQ=255) gATCAAACGCCGATGACCTACGAAGAGTTATACAGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCTCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGCACGCTGCCCGCAACGtca > 2:182556/1‑141 (MQ=255) aTCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGCGCGGCAGGACGCGCGCTACGGTGG‑AAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTAtgt > 2:352751/1‑141 (MQ=255) aaaCGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGGGCGGTGCGGCCAAGTTTGTCCGTGATGCGTGAAACGATTCCACTTTTTTGAACGCTGCACGCCACGTATCTgg > 2:234105/1‑143 (MQ=255) aaCGCCGATGACCTACGAAGAGTTTTTCGGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGgt < 2:921949/143‑1 (MQ=255) aCGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGgtg < 1:921586/143‑1 (MQ=255) cGCCGATGACCTACGAAGAGTGGTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGgtgt < 2:1096212/143‑1 (MQ=255) gCCGATGACCTACGAAGAGTTTTGCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGgtggc > 2:1093263/1‑141 (MQ=255) ccGATGACCTACGAAGAGTTTTTCCGTGAGCGGCGGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCa < 2:498271/143‑1 (MQ=255) gACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTg < 1:300171/143‑1 (MQ=255) ctgcGAGGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGGGGAAAAGGCGGCGCGCGCTGTTGCTAAATTTGTACGTCAGGCTTTGAACGATTCCTCTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACt < 1:840890/140‑1 (MQ=255) gAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACGGGCa > 1:112319/1‑143 (MQ=255) gTTTTTCCGTGAGCGGCAGGACGCGCGCTATGGTGGAAAAGGCGGCGCGCGTTGCTGCTAAATTTGTACGTTAGGTTTTAAACGATTCCGCTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACTGGCAGGTaa < 1:521770/143‑1 (MQ=255) tttCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAAGTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACTGGCAGGTaatga > 2:861659/1‑143 (MQ=255) ccGTGCGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGCCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACTGGCAGGTaatgaatg < 1:568483/143‑1 (MQ=255) gTGCGCGGCCGGCCGCGGGCTCCAGTGGAAAAGGCGGCGCGCGCTAATATTAGATGCTCACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACTGGCAGGTAATGAATGGa < 2:233547/143‑1 (MQ=255) gTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAGCGCTGCACGCAACGTATCTGGTGTCAGTGTGACTGGCAGGTaatgcatgaa > 1:851689/1‑141 (MQ=255) tGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTgctcacggaaaaactcttcgtaggtcatcggcgtttgatcgggatggttaacccgcatatgttcgacatagttgtcgtaatcaggcataccaatca < 1:521595‑M2/143‑97 (MQ=255) gCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTgctcacggaaaaactcttcgtaggtcatcggcgtttgatcgggatggttaacgcgcagatgttcgacatagttgtcgtaatcaggcataccaatcatca < 2:123718‑M2/143‑100 (MQ=255) | TCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAAATTTGTACGTCAGGCTTTAAACGATTCCACTTTTTTGAACGCTGCACGCAACGTATCTGGTGTCAGCGTGACTGGCAGGTAATGAATGGACTCC > NC_000913/632191‑632473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |