New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4567210	43 (0.760)	3 (0.060)	3/250	NT	6.7%	coding (37/1281 nt)	yjiN	DUF445 domain‑containing protein YjiN
	?	NC_000913	= 4567214	43 (0.810)					coding (33/1281 nt)	yjiN	DUF445 domain‑containing protein YjiN

CCACCACCGCAAACCAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGG  >  NC_000913/4567069‑4567351                                                                                                                                              |                                                                                                                                              ccaccaCCGCAAACCAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAAc                                                                                                                                              >  1:241579/1‑143 (MQ=255)      aCCGCAAACCAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTGGCAGGGGCGATAAGCAGTAAAGAGAGCGCCAACCTTtt                                                                                                                                         <  1:202155‑M2/143‑3 (MQ=255)       ccGCACACCAGCCCGCCAGCGCGCCGACCATCGCCGCGGCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTttg                                                                                                                                        >  2:762276‑M2/1‑140 (MQ=255)        cGCAAACCAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTttgg                                                                                                                                       <  1:853932‑M2/143‑5 (MQ=255)           aaaCCAGTCCGCCCGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTttggcgc                                                                                                                                    >  2:589993‑M2/1‑136 (MQ=255)           aaaCCAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTttggcgc                                                                                                                                    >  2:731140‑M2/1‑136 (MQ=255)            aaCCCGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAAaaggttggcgct                                                                                                                                   <  2:760606‑M1/143‑13 (MQ=255)               cAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCt                                                                                                                                <  1:1048157/143‑1 (MQ=255)                 ggccGACAGCGCGCCGACCATCGCCGCTTTGGCAATCACCAACACGCCGCTGACCGAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGa                                                                                                                              <  1:1042050/141‑1 (MQ=255)                 gcccGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGGAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGa                                                                                                                              <  1:116589/141‑1 (MQ=255)                 gTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGa                                                                                                                              <  2:80342/143‑1 (MQ=255)                 gTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGa                                                                                                                              <  2:481128/143‑1 (MQ=255)                 gTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGa                                                                                                                              <  2:172976/143‑1 (MQ=255)                      ccAGCGCGCCGACCGTCTCCGCTTCAGCAATCGCCTTCACCCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCg                                                                                                                         <  2:1036864/143‑1 (MQ=255)                        aGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGAt                                                                                                                       <  1:173655/143‑1 (MQ=255)                          cgcgcCGACCATCGCCGCTTCACAACTCTCCTCTGTGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGa                                                                                                                     <  1:1040844/143‑1 (MQ=255)                                 aCCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTAtt                                                                                                              >  1:841741/1‑143 (MQ=255)                                  ccATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTc                                                                                                             <  1:929105/143‑1 (MQ=255)                                   cATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCACAAACGGCGTACCGACAAAGGTAGCAGCGGCGATAGGCAGTAAAGAGCGCGCCCACCTTCTGCCGCGTCTGAGTTCGATGAGTTTATTCa                                                                                                            >  1:188127/1‑143 (MQ=255)                                       gccgcTTCAGCAATCGCCTTCGCGCCGCTCACCCAAACATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTATTGGCGCGTCCGCGTTCGACGAGTTTATACATaca                                                                                                        >  2:905752/1‑141 (MQ=255)                                           cTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTa                                                                                                    <  2:202155/143‑1 (MQ=255)                                             tCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGGCTGAGATCGAGGAGTTTATTCCAGACGTTAAg                                                                                                  >  2:1097840/1‑143 (MQ=255)                                             tCAGCAATCGCCTGCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAg                                                                                                  <  2:739772/143‑1 (MQ=255)                                                gCAACCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAACCAGCGTAACGACGAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAAt                                                                                               <  1:435295/143‑1 (MQ=255)                                                   agcgacgtCACCCCGCTCACCCGAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGACACGCCGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATaga                                                                                            <  2:727691/136‑1 (MQ=255)                                                      gCCGTCACGCCGCGCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGcc                                                                                         <  2:691810/143‑1 (MQ=255)                                                               ccgcACACCCAAAAAGTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCg                                                                                <  1:55066/143‑1 (MQ=255)                                                               cagcTCACCCAAAAATTGCGCGGCAAAAACAGCGTAACGACAAGGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCg                                                                                <  2:842359/141‑1 (MQ=255)                                                                cgcTCGCCCGAAAGTTGGGCGGCAAAACCAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCgg                                                                               <  2:833548/143‑1 (MQ=255)                                                                        cAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAACGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATAGCGCa                                                                       >  2:207630/1‑143 (MQ=255)                                                                         aaaaaTTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAAaaggttggcgctctctttactgcttatcgccg                                                                                                               >  1:481734‑M1/1‑70 (MQ=255)                                                                         aaaaaTTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAAaaggttggcgctctctttactgcttatcgccg                                                                                                               <  2:481734‑M1/102‑33 (MQ=255)                                                                                gggCGGCAAAAACAGCGTAACGACAAACGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCAc                                                               <  1:59847/143‑1 (MQ=255)                                                                                  gcggcAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTg                                                             >  1:101567/1‑143 (MQ=255)                                                                                   cggcAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCCCTGc                                                            >  1:884744/1‑143 (MQ=255)                                                                                     gcAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCGGACGGCCGGACCGCCGAAAAATCACTGctc                                                          >  2:817914/1‑143 (MQ=255)                                                                                      cAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGCCTGAGTTCGATGAGCTTAATCATAACGCGAAGAATAGAGCCTGACACCCGGATCGCGCAACACACACTGctcc                                                         >  2:748489/1‑143 (MQ=255)                                                                                        aaaaCAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGctcctc                                                       <  2:314925/143‑1 (MQ=255)                                                                                            caccGTAACGACAAAAGTAGGGGGGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACt                                                   <  1:31888/140‑1 (MQ=255)                                                                                                      aCAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGCTCGCGCAACAATCCCTGCTCCTCCCCTCTCTCGGCTg                                         >  1:34732/1‑143 (MQ=255)                                                                                                      aCAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTg                                         >  1:832851/1‑143 (MQ=255)                                                                                                        aaaGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCGCGGCTGcc                                       >  2:248250/1‑143 (MQ=255)                                                                                                            gTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGTGGAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGAt                                   >  1:751354/1‑143 (MQ=255)                                                                                                             tAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATg                                  <  1:280624/143‑1 (MQ=255)                                                                                                             tAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGATCGATGAGATTATGCATAACGGTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTACTCCACTAGCCCGGCTGCCTGATg                                  >  1:475719/1‑143 (MQ=255)                                                                                                               gcagcGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATccc                                                                          >  1:238706/1‑99 (MQ=255)                                                                                                               gcagcGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTGATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATcgc                                                                          <  2:238706/101‑1 (MQ=255)                                                                                                                cagcGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTg                               <  1:971082/143‑1 (MQ=255)                                                                                                                   cggcgATAAGCAGTAAAGAGAGCGCCAACCTTttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaattttt                                                                     <  2:481734‑M2/102‑71 (MQ=255)                                                                                                                   cggcgATAAGCAGTAAAGAGAGCGCCAACCTTttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaattttt                                                                     >  1:481734‑M2/1‑32 (MQ=255)                                                                                                                              aGTAAAGAGAGCGCCAACCTGCTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGa                 <  1:478514/143‑1 (MQ=255)                                                                                                                               gTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAg                >  2:362877/1‑143 (MQ=255)                                                                                                                                     agagCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCCCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATcc          >  1:41003/1‑143 (MQ=255)                                                                                                                                       agCGCCAACCTTttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaatttttgggtgagcggcgtgaaggcgattgctgaagcggcgatggtcggcgcgctggcggacgggtt        <  2:760606‑M2/143‑132 (MQ=255)                                                                                                                                        gcgcCAAaaggttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaatttttgggtgagcggcgtgaaggcgattgctgaagcggcgatggtcggcgcgctggcggactggttt       >  2:731140‑M1/1‑7 (MQ=255)                                                                                                                                        gcgcCAAaaggttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaatttttgggtgagcggcgtgaaggcgattgctgaagcggcgatggtcggcgcgcgggcggactggttt       >  2:589993‑M1/1‑7 (MQ=255)                                                                                                                                        gcgcCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCgcgc       >  1:713246/1‑143 (MQ=255)                                                                                                                                          gcCAACCTGTTGGCGCGTCTGAGTTCGATGAGTTTATTCATGCCGTTCCCCAGACACCCTGCCGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCa     <  1:207630/143‑1 (MQ=255)                                                                                                                                           ccAAaaggttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaatttttgggtgagcggcgtgaaggcgattgctgaagcggcgatggtcggcgcgctggcggactggtttgcg    <  1:853932‑M1/143‑140 (MQ=255)                                                                                                                                            cAAaaggttggcgctctctttactgcttatcgccgctgctacctttgtcgttacgctgtttttgccgcccaatttttgggtgagcggcgtgaaggcgattgctgccgcggcgatggtcggcgcgctggcgggctggtgtgcgg   >  2:762276‑M1/1‑3 (MQ=255)                                                                                                                                             aaaaggttggcgctctctttactgcttatcgcccctgccacctttgtcgttacgctgtttttgccgcccaatttttgggtgagcggcgtgaaggcgattgctgaagcggcgatggtcggcgcgctggcggactggtttgcggt  <  1:202155‑M1/143‑142 (MQ=255)                                                                                                                                              |                                                                                                                                              CCACCACCGCAAACCAGTCCGCCAGCGCGCCGACCATCGCCGCTTCAGCAATCGCCTTCACGCCGCTCACCCAAAAATTGGGCGGCAAAAACAGCGTAACGACAAAGGTAGCAGCGGCGATAAGCAGTAAAGAGAGCGCCAACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGG  >  NC_000913/4567069‑4567351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.