| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3110402 = | 58 (1.030) | 3 (0.060) | 3/250 | NT | 5.4% | noncoding (37/76 nt) | pheV | tRNA‑Phe |
| ? | NC_000913 | = 4362593 | 51 (0.960) | noncoding (34/76 nt) | pheU | tRNA‑Phe | |||||
TGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCA > NC_000913/4362453‑4362735 | tGGTTGTGTTCGGGAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCaa > 2:998190‑M2/1‑141 (MQ=255) gTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGCATTTCCAGTc > 2:250869/1‑143 (MQ=255) ctttacttcggtagAAATGATTTCTACGCAGAACGCTTAAATCCTGGCGTCCTGAAACGAAAAACGCACCTCCGTGAACGTCCGTTTATATGAATTTGTTTCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCaatc > 2:154396‑M2/7‑139 (MQ=255) gAGTTCGTTAGAATTGATTTGTGTGCAGCACGCTTAAATCGTGGCGTCCTGAAACGAAACACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCaatcccc > 1:268699‑M2/1‑136 (MQ=255) gTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTg < 1:804565/143‑1 (MQ=255) ttCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGc < 1:534577/143‑1 (MQ=255) tCGGTAGAATTGATTTGTAGGCAGAACGCTTAAATCGTGTCGTCCTGAAACGAAAAACGGACCTGCGTGGAGTCCCGTTTAGATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGct < 1:155277/143‑1 (MQ=37) tCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGct > 1:599947/1‑143 (MQ=255) ggTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTGCAATCCCCTGccct > 2:847213/1‑143 (MQ=255) gTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTa < 1:731683/143‑1 (MQ=255) tcgAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGACAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTAc < 2:1048380/141‑1 (MQ=255) tAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTAc > 1:227213/1‑143 (MQ=255) ttGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTCTATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGAGGATTTTCAATCCCCTGCTCCACCGACt > 2:825447/1‑143 (MQ=255) tGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTg > 1:407762/1‑143 (MQ=255) tGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTg > 1:167092/1‑143 (MQ=255) gATTAGGAGGCAGACCTCTGAAATCGTGGCGTCCTGAAACGAAAAACGGACGTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGa < 2:646830/143‑1 (MQ=25) gAGGCAGAACGCTGAACTCGTGGCGTCCTGAAACGAAAAACGGACCGCCGTGGAGGTCCGTTTATATGAAGTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATc < 2:1085347/143‑1 (MQ=255) cGTCCTGAAACGAAAAACGGACGTCCGTGCAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAAcc < 2:256945/143‑1 (MQ=255) ccTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTa < 1:170009/143‑1 (MQ=255) cTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGCCTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTaa > 1:428643/1‑143 (MQ=255) tGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGAGATCCGGCCAACGGGGCGCCTTACCCCGtcaa > 2:735082/1‑140 (MQ=21) tGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGCTGCCGGGTCTCGCGATCGAACCCAGGTCACGGGGATTTTCCATTGCTTTTTCCACCGACTTAGCTATCCGGGCAACGGGACGCATTAAACCCTAAt > 2:439263/1‑143 (MQ=255) gAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGACTCGAACCAAGGACCCGGGGATTGTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCACCGAGGCGCATTAAACCGTCATCTGcac > 2:362694/1‑143 (MQ=21) gAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTCCCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATATacac > 1:312107/1‑143 (MQ=255) aaCTGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACAtct < 2:630509/143‑1 (MQ=255) aaCGGACCTCCACGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACAtct > 1:733967/1‑143 (MQ=255) gACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTAAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCAGATCTCGTc > 1:861472/1‑143 (MQ=255) cgccGTGGATGGGCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCGATCCGGGCAACGGGGCGCATTAGACCGTAATCTGGCCATCTCGTCAAc > 2:738352/3‑143 (MQ=17) tCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGCCAccc > 2:618417/1‑143 (MQ=255) cGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCACCGGGGCGCATTAAACCGTAATCTGCACATCTCGCCAACCTAATTTCCGTaa > 2:149561/1‑143 (MQ=255) gTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGCTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACAGCTCGTCAACCTAATTTCAGTaaa > 2:39001/1‑143 (MQ=255) tttATATGAATTCGGTTCCGCGACTCGTAATCGAACCACGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTaaaa < 2:1037342/143‑1 (MQ=21) tgtagatGTATCTGGTGCGCGGACTCGGAATCGAACCAACGACGCGGGGATTGTCAAGCCCCTGCTCTACCGACGGAGCGATCCGTGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTaaaa < 2:790963/138‑1 (MQ=18) aaTTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCa > 1:143266/1‑143 (MQ=255) aaTTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCa > 1:933615/1‑143 (MQ=255) tGGTGCCCGGACTCGGACTCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTg < 2:173543/143‑1 (MQ=255) ggTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGc < 2:227213/143‑1 (MQ=255) gCCCGGTCTCGGACTCCAACCAAGGACACGGCGATTTTCAAGCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGCGGCGCATTAACCCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTa < 2:1107618/143‑1 (MQ=21) gCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTa < 2:854883/143‑1 (MQ=255) cccGGACTCGGAATCGAGCGAAGGACACGGGGATTTTCAATCCTCTGCTCTACCGACTGAGCGATCCGGGAAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTaa < 2:899360/143‑1 (MQ=21) cccGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCCACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGCTTCAACTGCttga > 2:691545/1‑141 (MQ=255) cGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCTGTAAAAACGATTCATCTgatcaaca > 1:246983/1‑136 (MQ=18) ggAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGc > 1:844540/1‑143 (MQ=255) gAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCCAATTTCAGTAAAAGCGATTCAACTGCCTAAGATTGCGGCa > 1:865588/1‑143 (MQ=255) aaTCGAACCAAGGACACGGGGATTTTCaatccccgtgtccttggttcgattccgagtccgggcaccactaattcttaagaacccgcccacaaggcgg < 1:745469‑M2/97‑71 (MQ=255) aaTCGAACCAAGGACACGGGGATTTTCaatccccgtgtccttggttcgattccgagtccgggcaccactaattcttaagaacccgcccacaaggcgg > 2:745469‑M2/1‑27 (MQ=255) aaTCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTCATTTCAGTCAAAGCGCTTCAACTGCTTAAGATTGCGGCaa > 1:958298/1‑143 (MQ=255) aaTCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCaa > 1:962457/1‑143 (MQ=255) tctgacccAAGGACACGTGGTTTTTTAGTCCTCTGCTCTACCGACTTAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCaaa < 2:1018841/137‑1 (MQ=25) aaCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGc > 1:154569/1‑143 (MQ=255) ccAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCGAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCCGCAAATGGctc > 2:982427/1‑142 (MQ=255) ccAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTAGCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCGCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGcta > 2:626156/1‑142 (MQ=255) aGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAGGATTGCGGCCAACCGcttctt > 2:416078/1‑143 (MQ=255) aGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGcatctt > 2:974134/1‑143 (MQ=255) acacGGGGCTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTACAAGCGATTCAACTGCTTAAGATTGCGGCAAGTCGCTTCTTTTc > 1:163883/1‑143 (MQ=255) cacGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCt < 2:534851/143‑1 (MQ=255) acGGGGATTTTCaatccccgtgtccttggttcgattccgagtccgggcaccactaattcttaagaacccgcccacaaggcgggtttttgcttttggatctgacaataaccttcacgaaaaaaattaactgataaagtctgggg < 2:417024‑M2/143‑132 (MQ=255) acGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCCACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTGAGATTGAGGCAAATAGCTTCTTTTAtg > 1:526837/1‑143 (MQ=25) acGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtg < 2:599947/143‑1 (MQ=255) ggggATTTTCAATCCGCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgtg < 2:62836/143‑1 (MQ=255) ggtaTTGTCAATCCCCGCCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCCACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTgtgt < 2:350112/140‑1 (MQ=38) gggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTgtgt > 1:908841/1‑143 (MQ=255) ttttCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt < 1:8086/143‑1 (MQ=255) cAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCa < 2:299092/143‑1 (MQ=255) | TGGTTGAGTTCGGTAGAATTGATTTGGAGGCAGAACGCTTAAATCGTGGCGTCCTGAAACGAAAAACGGACCTCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCA > NC_000913/4362453‑4362735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |