mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 20 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3885292 | 57 (1.010) | 3 (0.060) | 3/254 | NT | 5.0% | coding (217/1647 nt) | yidC | membrane protein insertase YidC |
| ? | NC_000913 | = 3885305 | 60 (1.110) | coding (230/1647 nt) | yidC | membrane protein insertase YidC | |||||
| * | ? | NC_000913 | 3467373 = | 59 (1.050) | 3 (0.060) | 3/252 | NT | 4.9% | coding (2481/2694 nt) | chiA | endochitinase |
| ? | NC_000913 | 3467392 = | 60 (1.120) | coding (2462/2694 nt) | chiA | endochitinase | |||||
| * | ? | NC_000913 | 3055645 = | 64 (1.140) | 3 (0.050) | 3/258 | NT | 4.7% | coding (34/330 nt) | zapA | cell division protein ZapA |
| ? | NC_000913 | 3055670 = | 60 (1.090) | coding (59/330 nt) | zapA | cell division protein ZapA | |||||
| * | ? | NC_000913 | 2560906 = | 75 (1.330) | 3 (0.060) | 3/250 | NT | 4.2% | intergenic (+8/‑462) | yffL/yffM | CPZ‑55 prophage; uncharacterized protein YffL/CPZ‑55 prophage; uncharacterized protein YffM |
| ? | NC_000913 | 2560927 = | 65 (1.220) | intergenic (+29/‑441) | yffL/yffM | CPZ‑55 prophage; uncharacterized protein YffL/CPZ‑55 prophage; uncharacterized protein YffM | |||||
| * | ? | NC_000913 | 1888594 = | 60 (1.060) | 3 (0.050) | 3/258 | NT | 4.9% | coding (1153/1686 nt) | fadD | fatty acyl‑CoA synthetase |
| ? | NC_000913 | 1888612 = | 58 (1.050) | coding (1135/1686 nt) | fadD | fatty acyl‑CoA synthetase | |||||
| * | ? | NC_000913 | = 572411 | 667 (11.830) | 15 (0.280) | 10/250 | NT | 3.0% | coding (44/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572431 | 336 (6.300) | coding (64/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 572405 = | 745 (13.210) | 12 (0.280) +31 bp |
10/202 | NT | 2.1% | coding (38/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 1095504 | NA (NA) | intergenic (‑67/‑40) | insE‑4/ymdE | IS3 element protein InsE/protein YmdE | |||||
| * | ? | NC_000913 | = 572325 | 2040 (36.180) | 16 (0.310) | 10/244 | NT | 0.85% | intergenic (+74/‑43) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 572334 | 1867 (35.850) | intergenic (+83/‑34) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 572316 = | 2098 (37.210) | 42 (0.810) | 14/244 | NT | 2.2% | intergenic (+65/‑52) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | 572345 = | 1867 (35.850) | intergenic (+94/‑23) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 571554 = | 2971 (52.700) | 3 (0.050) | 3/256 | NT | 0.10% | coding (101/798 nt) | ybcM | DLP12 prophage; putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | 571597 = | 2864 (52.400) | coding (144/798 nt) | ybcM | DLP12 prophage; putative DNA‑binding transcriptional regulator | |||||