New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	474269 =	NA (NA)	3 (0.080)	3/252	NT	NA	intergenic (+17/+32)	amtB/tesB	ammonia/ammonium transporter/acyl‑CoA thioesterase II
	?	NC_000913	474296 =	NA (NA)					intergenic (+44/+5)	amtB/tesB	ammonia/ammonium transporter/acyl‑CoA thioesterase II

AAATTGGCGGATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCTATACAGCAGCC  >  NC_000913/474154‑474431                                                                                                                                               |                                                                                                                                        aaaTTGGCGGATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAt                                                                                                                                         >  1:41047/1‑143 (MQ=255)   acatcggcgtccggcgcacgtggctttgtgcgcggtgagttttatacaaaagacggcgtactggttgcctccaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGATGGTTTTCACCTCCGGCTAttt                                                                                                                                       >  2:526279‑M1/114‑143 (MQ=255)     tGGCGGATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttt                                                                                                                                     >  1:688959/1‑143 (MQ=255)      tcggcgtccagcgcacgtggctttgtgcgcggtgagttttatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctggttttt                                                                                                                                    >  1:127698‑M2/138‑143 (MQ=255)      tcggcgtccagcgcacgtggctctgtgcgcggtgagttttatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgttgttt                                                                                                                                    >  1:537249‑M2/138‑143 (MQ=255)          gATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCCGACGGTTTTCACCTCCGGCTCTTCTTTTCAt                                                                                                                                >  2:522889/1‑143 (MQ=255)           gtccagcgcacgtggcgttgtgcgcggtgagttttatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAtt                                                                                                                               >  2:511442‑M1/106‑143 (MQ=255)           aTCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGACACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACGGCCGGACGGTTTTCACCTCCGGCTAGTTTTTAAAtt                                                                                                                               >  1:553575/1‑143 (MQ=255)             cggACTGTTGGTCTGCGTGGACCGTAACAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACATGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgt                                                                                                                             <  1:709835/141‑1 (MQ=255)             ccagcgcacgtggctttgtgcgcggtgagttttatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgt                                                                                                                             >  2:534448‑M1/104‑143 (MQ=255)              ggACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                                                                                            <  2:339722/142‑1 (MQ=255)               gACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGa                                                                                                                           >  1:703594/1‑143 (MQ=255)               gACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGa                                                                                                                           <  1:46079/143‑1 (MQ=255)                   cttGGTCTGCGTGTACCGGACGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTAc                                                                                                                       <  2:575870/142‑1 (MQ=255)                     tGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGAAACGGCTGGAATGCCGATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGc                                                                                                                     <  1:811033/143‑1 (MQ=255)                      ggTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTACTTTTTTAATTGTGATTCCGCa                                                                                                                    >  2:216121/1‑143 (MQ=255)                           gCGTGTACCGGAAGAGCAGCAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAcc                                                                                                               <  2:327248/143‑1 (MQ=255)                                tACAGGAGGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTc                                                                                                          <  1:94475/143‑1 (MQ=255)                                    ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGCCGAGAATGACTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGATAATCACCTCTGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGa                                                                                                      >  1:728345/1‑143 (MQ=255)                                     gAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGaa                                                                                                     <  2:489068/143‑1 (MQ=255)                                      aaGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAc                                                                                                    <  1:42472/143‑1 (MQ=255)                                      aaGAGCAGGAGCGAGAAGGGCTGGATGGCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAc                                                                                                    <  1:212629/143‑1 (MQ=255)                                          gCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTCTTTTTGTAATTGTGATTACGCATCACCGCTTCCTGAACGGTc                                                                                                >  1:337323/1‑143 (MQ=255)                                          gCAGGAGCGAGAAGGGCTGGATGTCAACAACCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                                                                                <  1:242861/143‑1 (MQ=255)                                             ggAGCGAGAAGGTCTGGATCTCCACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                                                                                             <  1:430405/143‑1 (MQ=255)                                             ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                                                                                             <  1:431471/143‑1 (MQ=255)                                                 cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAACCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCCCCCCTTCCTGGACGGTctgggcga                                                                                         >  1:458323/1‑136 (MQ=255)                                                 cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCaa                                                                                         <  1:168326/143‑1 (MQ=255)                                                       gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTa                                                                                   >  1:285887/1‑143 (MQ=255)                                                          cTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTCCGc                                                                                >  2:542640/1‑143 (MQ=255)                                                           tGGACGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGcc                                                                               <  1:520383/143‑1 (MQ=255)                                                            ggATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTACTTGTGATTACGCACCACCCCTTCCTGTACGCCCCCCGCAACCAGTACgtag                                                                              >  1:677345/1‑140 (MQ=255)                                                                 tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGATTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGTGCGCGTCAACCAGTccgccggtctg                                                                         >  2:105820/1‑138 (MQ=255)                                                                  cAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                                                        <  1:479085/143‑1 (MQ=255)                                                                   aaCAGCCACGGCGAGAATGCCTATGACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCGCCTCCGGCTATTGTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGACGTCTAggg                                                                       <  2:332289/143‑1 (MQ=255)                                                                   aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAACCAGCCGGACGGGTGTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                                                       <  1:86897/143‑1 (MQ=255)                                                                   aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCCCCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                                                       >  1:362614/1‑143 (MQ=255)                                                                   aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAGCCAGTACGCCGGCTTggg                                                                       >  1:230419/1‑143 (MQ=255)                                                                   aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                                                       <  1:488876/143‑1 (MQ=255)                                                                         cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAGCGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa                                                                 >  1:2438/1‑143 (MQ=255)                                                                          aCGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAGCCGCCGGACGGTTTTCACCTCCGGCTATGTATTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaaa                                                                <  1:222122/143‑1 (MQ=255)                                                                          aCGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGACGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaaa                                                                <  1:163716/143‑1 (MQ=255)                                                                                        tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                                                                                   <  1:190648/94‑1 (MQ=255)                                                                                        tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                                                                                   >  2:190648/1‑94 (MQ=255)                                                                                         gtgaCGCGTATCAAGCACTGCTAAAAACAGCCGGACGGTTTTCTCCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACaaa                                                 <  2:554974/140‑1 (MQ=255)                                                                                           aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCGGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGc                                               >  1:121265/1‑143 (MQ=255)                                                                                              gcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCAc                                            >  1:73062/1‑143 (MQ=255)                                                                                                  agcaggCACTGCAAAGAGCAGCCGGACGGTTTTCACCTCCTGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTgc                                        <  2:93047/138‑1 (MQ=255)                                                                                                   aCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCCGTACGCCGTCTTGGGTATAAAACTCACCGCCCACAAAGCCACCTgcg                                       >  2:424308/1‑143 (MQ=255)                                                                                                       acaattaaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTgg                                   >  2:534448‑M2/41‑143 (MQ=255)                                                                                                        cACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGa                                  >  1:288622/1‑143 (MQ=255)                                                                                                         aattaaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAACGCCACGTGCGCTGGAc                                 >  2:511442‑M2/39‑143 (MQ=255)                                                                                                           tGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAGGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGc                               >  1:244293/1‑143 (MQ=255)                                                                                                              aaacaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAGAGCCACGTGCGCTGGACGCCGa                            >  1:537249‑M1/7‑143 (MQ=255)                                                                                                              aaaaacCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGa                            >  1:127698‑M1/7‑143 (MQ=255)                                                                                                                 aaatagccggaggtgaaaaccatccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTGGAGGCAACCAGTACGCCGTCTTTTGTATAAAACTCACCGCGCACAAAGCCACGTGCGCCGGACGCCGATGt                         >  2:526279‑M2/31‑143 (MQ=255)                                                                                                                         ggACGGTTTTCACCTCCGGCTATTTTTTTCATTGTGACTACGCATCACCCCTGCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCa                 <  2:199457/143‑1 (MQ=255)                                                                                                                          ggcGGGTTGCACCTCCGGCGATTTTTTTAATTGTGATTACGCATCCCCCCCTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACCCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCAc                <  1:246737/141‑1 (MQ=255)                                                                                                                          gACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCAGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCAc                >  1:424034/1‑143 (MQ=255)                                                                                                                                tttCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCtata          <  1:450/143‑1 (MQ=255)                                                                                                                                tttCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCtata          <  1:815954/143‑1 (MQ=255)                                                                                                                                  tCACCTCCGGCTATTTTTTTAATTGTGTTTACTTATCACCCCTTCCTGAACGGTCTAGTCAACCTGTCCGCCGTCTTGGTTATAAAACTCAACGCGCACACAGCCACGTGCCCTCGACGATCATGTGCTTTACACGCcatcgc        >  2:133192/1‑140 (MQ=255)                                                                                                                                   cACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCTATAcag       <  1:540962/143‑1 (MQ=255)                                                                                                                                    aCCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTCCGCCGTCTTGGTTATACAACTCACCGCGCACAAAGCCCCGTGCGCTGTCCGCCGACGTCCTCCACTTGCTATActgc      >  2:589388/1‑143 (MQ=255)                                                                                                                                     ccTGCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGGCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCTATAcagca     <  1:95787/143‑1 (MQ=255)                                                                                                                                       tCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGATCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCTATACagcagc   >  1:779869/1‑143 (MQ=255)                                                                                                                                        ccGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCTATACAGCAGcc  >  2:558748/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                        AAATTGGCGGATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGCTGGACGCCGAGGTGCTCTCCACGCTATACAGCAGCC  >  NC_000913/474154‑474431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.