New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1409894 =	27 (0.810)	3 (0.090)	3/252	NT	11.0%	coding (384/1374 nt)	dbpA	ATP‑dependent RNA helicase DbpA
	?	NC_000913	1409908 =	23 (0.730)					coding (398/1374 nt)	dbpA	ATP‑dependent RNA helicase DbpA

GTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTG  >  NC_000913/1409752‑1410030                                                                                                                                               |                                                                                                                                         gTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGCTTCGTTGCACCCTCCGCCGCTGCTTCTCGTGGCa                                                                                                                                          >  1:169718/1‑143 (MQ=255)            gATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCg                                                                                                                               >  1:80943/1‑143 (MQ=255)                  cgcaaaacggatgacatcatcaatggcatcgctaaatcccatatccagcatgcggtcggcctcatccatcaccagcgtattcaacgcatccagtgataccgtgcctttttgcaggtgatccagcaAACGCCGGGGCGTTTGCt                                                                                                                         >  1:124613‑M1/126‑143 (MQ=255)                   tGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTGTGCtc                                                                                                                        >  2:100705/1‑142 (MQ=255)                   tGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGGTCGGTATGCAGCGTGATTCGTTGCAACGTGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTg                                                                                                                        >  2:265506/1‑143 (MQ=255)                   tGGCAGGTGAAGTGCGTCGGCTGGCGCGTGTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTg                                                                                                                        <  1:129774/143‑1 (MQ=255)                    ggCAGGTGATTTGCGTCGGCTGGCGTGTTTGCTGCCCAATACCAAAAGTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTgg                                                                                                                       <  2:345084/143‑1 (MQ=255)                    ggCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTgg                                                                                                                       <  1:242798/143‑1 (MQ=255)                     gCAGGTGACTTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGAACCTTGGGCCGCGTAGTATCGTGGCAACGCCGGGGCGTTTGCTGGa                                                                                                                      <  1:340635/143‑1 (MQ=255)                        ggTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGATTGCTGGATCa                                                                                                                   >  2:590265/1‑143 (MQ=255)                          tGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCAcc                                                                                                                 <  1:77699/143‑1 (MQ=255)                                               ttttCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTCGCAACATGCGCCGCATATTATCGTGTCAACGCCGGGGCGTTTGCTGGATCACCTGGAAAAAGGCGCGGTATCAc                                                                                            >  1:61050/1‑143 (MQ=255)                                                 ttCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTg                                                                                          <  2:80943/143‑1 (MQ=255)                                                               aaaaTTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATAc                                                                            >  1:477002/1‑143 (MQ=255)                                                               aaaaTTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATAc                                                                            >  1:153596/1‑143 (MQ=255)                                                                       tacgccgtgCGGTGGTGAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCCGTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTga                                                                    <  1:47247/137‑1 (MQ=255)                                                                              tgggggcgtCAGCCGTTGGGTCGGCGGGGTGATGCGTTGCAACATGCGCCGCAGACTATCGTGGACGGGACGGAGCGGATGGTAATTGCTCGGTAAAGGGGGACGGTAGCACTGGATGCGGTGAATGCGCTGGTGATGGATGa                                                             <  2:469399/136‑1 (MQ=255)                                                                                     atcaccagcgtattcaacgcatccagtgataccgtgcctttttgcaggtgatccagcaAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCa                                                                                                     <  1:661239‑M1/38‑1 (MQ=255)                                                                                     atcaccagcgtattcaacgcatccagtgataccgtgcctttttgcaggtgatccagcaAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCa                                                                                                     >  2:661239‑M1/59‑96 (MQ=255)                                                                                       cAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCg                                                    >  2:371585/1‑143 (MQ=255)                                                                                        aaCCGTTCGGCATGCCGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGc                                                   <  1:16104/143‑1 (MQ=255)                                                                                         aCCGTTCGGTATGCAGCGTGATTCGTTGGACGAGTCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGAGCACCTTCAAAAAGGCACGGGAGCACGGTATGCGTTGAATACGCGGGTGATGGAGGAGGCCGACCGCa                                                  >  2:322886/1‑143 (MQ=255)                                                                                           cGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATg                                                <  1:443713/143‑1 (MQ=255)                                                                                            gTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGc                                               >  1:443632/1‑143 (MQ=255)                                                                                             ttCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGCTGAGGCCGACCGCATGCt                                              >  1:204548/1‑143 (MQ=255)                                                                                                        gCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGAt                                   >  2:487766/1‑143 (MQ=255)                                                                                                              ttCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCg                             >  1:309546/1‑143 (MQ=255)                                                                                                                  ttGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGc                         <  2:531059/143‑1 (MQ=255)                                                                                                                              ccgcATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATCCGCTGGTGCTGGATGAGGCCGACCGCCTGCTGGATATGGGATTTAGCGATGCCATTGATGgtgt             >  2:175866/1‑143 (MQ=255)                                                                                                                                   tattatCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATcc        >  1:314982/1‑143 (MQ=255)                                                                                                                                         cGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTg  >  1:546463/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                         GTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTG  >  NC_000913/1409752‑1410030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.