New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1409894 =	27 (0.810)	3 (0.090)	3/252	NT	11.0%	coding (384/1374 nt)	dbpA	ATP‑dependent RNA helicase DbpA
	?	NC_000913	1409908 =	23 (0.730)					coding (398/1374 nt)	dbpA	ATP‑dependent RNA helicase DbpA

GTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCG  >  NC_000913/1409769‑1410032                                                                                                                                            |                                                                                                                             cgcaaaacggatgacatcatcaatggcatcgctaaatcccatatccagcatgcggtcggcctcatccatcaccagcgtattcaacgcatccagtgataccgtgcctttttgcaggtgatccagcaAACGCCGGGGCGTTTGCt                                                                                                                           >  1:124613‑M1/126‑143 (MQ=255)  tGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTGTGCtc                                                                                                                          >  2:100705/1‑142 (MQ=255)  tGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGGTCGGTATGCAGCGTGATTCGTTGCAACGTGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTg                                                                                                                          >  2:265506/1‑143 (MQ=255)  tGGCAGGTGAAGTGCGTCGGCTGGCGCGTGTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTg                                                                                                                          <  1:129774/143‑1 (MQ=255)   ggCAGGTGATTTGCGTCGGCTGGCGTGTTTGCTGCCCAATACCAAAAGTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTgg                                                                                                                         <  2:345084/143‑1 (MQ=255)   ggCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTgg                                                                                                                         <  1:242798/143‑1 (MQ=255)    gCAGGTGACTTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGAACCTTGGGCCGCGTAGTATCGTGGCAACGCCGGGGCGTTTGCTGGa                                                                                                                        <  1:340635/143‑1 (MQ=255)       ggTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGATTGCTGGATCa                                                                                                                     >  2:590265/1‑143 (MQ=255)         tGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCAcc                                                                                                                   <  1:77699/143‑1 (MQ=255)                              ttttCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTCGCAACATGCGCCGCATATTATCGTGTCAACGCCGGGGCGTTTGCTGGATCACCTGGAAAAAGGCGCGGTATCAc                                                                                              >  1:61050/1‑143 (MQ=255)                                ttCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTg                                                                                            <  2:80943/143‑1 (MQ=255)                                              aaaaTTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATAc                                                                              >  1:153596/1‑143 (MQ=255)                                              aaaaTTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATAc                                                                              >  1:477002/1‑143 (MQ=255)                                                      tacgccgtgCGGTGGTGAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCCGTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTga                                                                      <  1:47247/137‑1 (MQ=255)                                                             tgggggcgtCAGCCGTTGGGTCGGCGGGGTGATGCGTTGCAACATGCGCCGCAGACTATCGTGGACGGGACGGAGCGGATGGTAATTGCTCGGTAAAGGGGGACGGTAGCACTGGATGCGGTGAATGCGCTGGTGATGGATGa                                                               <  2:469399/136‑1 (MQ=255)                                                                    atcaccagcgtattcaacgcatccagtgataccgtgcctttttgcaggtgatccagcaAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCa                                                                                                       <  1:661239‑M1/38‑1 (MQ=255)                                                                    atcaccagcgtattcaacgcatccagtgataccgtgcctttttgcaggtgatccagcaAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCa                                                                                                       >  2:661239‑M1/59‑96 (MQ=255)                                                                      cAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCg                                                      >  2:371585/1‑143 (MQ=255)                                                                       aaCCGTTCGGCATGCCGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGc                                                     <  1:16104/143‑1 (MQ=255)                                                                        aCCGTTCGGTATGCAGCGTGATTCGTTGGACGAGTCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGAGCACCTTCAAAAAGGCACGGGAGCACGGTATGCGTTGAATACGCGGGTGATGGAGGAGGCCGACCGCa                                                    >  2:322886/1‑143 (MQ=255)                                                                          cGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATg                                                  <  1:443713/143‑1 (MQ=255)                                                                           gTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGc                                                 >  1:443632/1‑143 (MQ=255)                                                                            ttCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGCTGAGGCCGACCGCATGCt                                                >  1:204548/1‑143 (MQ=255)                                                                                       gCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGAt                                     >  2:487766/1‑143 (MQ=255)                                                                                             ttCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCg                               >  1:309546/1‑143 (MQ=255)                                                                                                 ttGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGc                           <  2:531059/143‑1 (MQ=255)                                                                                                      tgcctttttgcaggtgatccagcaaacgccccggcgttTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTgat                                                                     <  1:661239‑M2/58‑1 (MQ=255)                                                                                                      tgcctttttgcaggtgatccagcaaacgccccggcgttTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTgat                                                                     >  2:661239‑M2/39‑96 (MQ=255)                                                                                                             ccgcATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATCCGCTGGTGCTGGATGAGGCCGACCGCCTGCTGGATATGGGATTTAGCGATGCCATTGATGgtgt               >  2:175866/1‑143 (MQ=255)                                                                                                                  tattatCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATcc          >  1:314982/1‑143 (MQ=255)                                                                                                                        cGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTg    >  1:546463/1‑143 (MQ=255)                                                                                                                          agcaaacgccccggcgttTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTgcg  >  1:124613‑M2/19‑143 (MQ=255)                                                                                                                                            |                                                                                                                             GTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCG  >  NC_000913/1409769‑1410032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.