New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 213083 = | 39 (1.180) | 3 (0.090) | 3/256 | NT | 7.6% | coding (753/1299 nt) | tilS | tRNA(Ile)‑lysidine synthetase |
? | NC_000913 | 213120 = | 35 (1.090) | coding (790/1299 nt) | tilS | tRNA(Ile)‑lysidine synthetase |
TGCTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGC > NC_000913/212978‑213246 | caacgcgcccaaacgtaaacagggtgaggcatcttcccgcgccagcgccactccctgccagatcctcaccaacgcgtcgcgggaaggcatcggtgcattctgcccTGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTggcag > 2:626634‑M1/106‑143 (MQ=255) gCTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGTTGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTggcagg < 1:390101/143‑1 (MQ=255) cTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTggcaggg > 2:620779/1‑143 (MQ=255) cTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGAAGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGAGTATCCGCCGCCGGCTggcaggg > 1:351904/1‑143 (MQ=255) gAACAAGAGAGCCGGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTggcagggca < 1:616763/143‑1 (MQ=255) cccaaacgtaaacagggtgaggcatcttcccgcgccagagccacttcctgccagatcctcaccaacgcgtcgcgggaaggcatcggtgcattctgccctgccaccccgcggcggataatcgccgcccggcgcgcagccctcct > 2:142204‑M2/136‑136 (MQ=255) cccaaacgtaaacagggtgaggcatctacccgcgccagcgccacttcctgccagatcctcaccaacgcgtcgcgggaatacatcggtgcattctgcccTGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGaa > 1:191727‑M1/99‑143 (MQ=255) gagagCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGc > 1:142204/1‑143 (MQ=255) aaacgtaaacagggtgaggcatcttcccgcgccagcgccacttcctgccagatcctcaccaacgcgtcgcgggaaggcatcggtgcattctgccc‑‑‑‑‑GCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGa > 1:40099‑M1/96‑143 (MQ=255) agagCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCCGGGGACGCTGCAGAGCGTGCCCATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCCCCGCTGGCTCGCAGGGCAGAATCCa > 1:608044/1‑143 (MQ=255) agagCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCa > 1:84040/1‑143 (MQ=255) tgGGTGACCTGCGGGGAGATGGTTTAGCGCACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCt < 2:389872/143‑1 (MQ=255) gATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTc > 2:381563/1‑143 (MQ=255) gctgGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGCTGAGTGCTGCCCGCCGCGCGGAGATTATCCGCCGCTGGCTGGCCGGGCAGCATGCACCGATGCCTTCCCGCGAcg > 2:291681/1‑143 (MQ=255) gCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGtt > 1:641234/1‑143 (MQ=255) cAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGACGAGTGATGCCCGCCGCGCGGCGCTTCTCCGCCGCTCGCGGGCAGCGCGGAATGCACCGCTCCCAGCCCGCGACGCGTTg > 2:287098/1‑143 (MQ=255) tgacTTTGCACACTGTCAATCGTCGCAGGTGACGCTGTAGATTGTGCTAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATGATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGa < 1:2779/143‑1 (MQ=255) gatTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAg < 1:57436/143‑1 (MQ=255) gtgtAGGACACTGTCAATCGGCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAgg < 2:54926/140‑1 (MQ=255) atTTAGCACACTGTCACTCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGCTGCCCGCCGCGCGTCGATTATCCTCCGCTGTCTGGCCGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAgg < 1:45243/143‑1 (MQ=255) atTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAgg > 1:264487/1‑143 (MQ=255) atTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAgg > 2:222774/1‑143 (MQ=255) ttAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCATAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGAt < 1:629389/143‑1 (MQ=255) gCACACTGTCGCGCGCCGGAGGGGACGCTGCCGCTTGTGCCAATGCTGGCGAGGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGCCGCGTTGGTTAGGATCTg < 2:405023/143‑1 (MQ=255) acacCGTCAGTCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCGGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGc < 2:318018/143‑1 (MQ=255) cTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAgg < 1:620779/143‑1 (MQ=255) aaTCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGtg > 1:445330/1‑143 (MQ=255) tCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGtggc > 2:9014/1‑143 (MQ=255) ccgcGGGGGACGCTGCAGATTGGGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGtggcgct < 2:149108/143‑1 (MQ=255) cAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCAGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGGGAGGATCTGGCAGGAAGtggcgctggc > 2:412510/1‑143 (MQ=255) gggACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGcgcg < 1:324661/143‑1 (MQ=255) cTGCAGATTGTGCCAATGCTGGCGATGAGTGAAGCCGGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGa < 2:288510/143‑1 (MQ=255) cAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGt > 1:429748/1‑143 (MQ=255) tGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGCAGATGCCTCACCCTGTTTACGt > 2:618411/1‑143 (MQ=255) tGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGCGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGt > 1:590588/1‑143 (MQ=255) tcggtgcattctgccctgccagccagcggcggataatcgccgcgcggcGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGttt > 1:40099‑M2/49‑143 (MQ=255) cGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTg < 1:418656/143‑1 (MQ=255) ttctgccctgccagccagcggcggataatcgccgcgcggcgggcaGGGCAGAATGCACCGATGTATTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGTAGATGCCTCACCCTGTTTACGTTTggg > 1:191727‑M2/46‑143 (MQ=255) aggagggcTGCGCGCCGGGCGGCGATTATCCGCCGCGGGGTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCTCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTggg > 2:142204‑M1/9‑143 (MQ=255) ggTGATGCCCGCCGCGCGGCGATGATCCGCCGCTGGCGGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGgcgc < 2:102010/142‑1 (MQ=255) ggggGCCCGCCGCGCGGCGATTATCCGCCGCGGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGGTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGt > 2:264487‑M1/5‑143 (MQ=255) gggCCCGCGGCGCGGCTGTTTTCCGCCGGTGGGGGGGAGGGCGGAATGCAGCGCGGCCTTCCCGCGACGCGTTGGGGAGGCTGTGGCAGGAAGTGGCGCGGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGttt < 2:522501/141‑1 (MQ=255) ctgccagccagcggcggataatcgccgcgcggcgggcaGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGGAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCgttg > 2:626634‑M2/39‑142 (MQ=255) aTGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGttt > 1:326282/1‑143 (MQ=255) gcgcgGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGa < 2:84040/143‑1 (MQ=255) cgATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTAt < 1:381563/143‑1 (MQ=255) tCCGCCGCTGGCTGGCAGAGCAGACTGCACCGATGCCGTCCCGCGACGCGTTGGCGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCg < 1:67175/143‑1 (MQ=255) ccgccgCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACCCTATCACTCGc > 2:524649/1‑143 (MQ=255) | TGCTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGC > NC_000913/212978‑213246 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |