| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3944978 | NA (NA) | 4 (0.090) | 3/252 | NT | 15.4% | noncoding (1275/2904 nt) | rrlC | 23S ribosomal RNA |
| ? | NC_000913 | = 4038811 | 23 (0.490) | noncoding (1293/2905 nt) | rrlA | 23S ribosomal RNA | |||||
ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAagcggg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3944837‑3944978‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCAT < NC_000913/4038811‑4038665 ggGGGGGTAGACCATGCGCCGCAGCGGCGGCAGCGACGCTTATGCGTTGTGGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAA < 2:259877/141‑1ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTGACGGTAAA > 1:607895/1‑143ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTGGGGTAGGCGAGTGTTCTGTTAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAA < 1:433828/143‑1ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTAGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCAGGCTGGAGGTATCAGAAGGGCGAATGCTGACATAAGTAACGATAAA > 2:391077/1‑143ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTGATGCGTTGTTGGGTAGGGGAGCGGTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTACCAGAAGTGCGAATGCTGACAGAAGTAACGAAAAA > 2:824771/1‑143 GGGGCTAACCCATGCACCTAAGCCGCCGCAGCGACGCTTATGCGTTGTTGGGTAGGGCAGCGTTCTGTAATCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC < 1:295797/143‑1 GGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGCATGCTGACCTCAGTAACGATAAAGC > 1:525822/1‑143 GGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC < 1:644645/143‑1 GGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGAGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTAGCAGAAGTGCGAATGGTGATGTAAGTAACGAGAAAGC > 2:608897/1‑143 GGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGAGTTGTAGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGC > 2:722968/1‑143 GGGCTAACCCATGCACCGAGGCGGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGGGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCATAAGTGCGAATGCTGACATAAGTAACGATAAAGCG < 2:393894/143‑1 tGCTAAGCCTTGCGCCGAAGCTGCGGGCGCGACGCTTATGCGTTGTGGGGTAGGGGAGTGTTATGTAGGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG < 2:92896/142‑1 GGCTAACCCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCCGCTATGTTTTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG < 1:844324/143‑1 GGCTAAACCACGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGG < 1:337927/143‑1 gcgAAACCGTGCACCGGAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG < 2:945219/140‑1 GCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGGAGGTGTGCTGTGAGGCATGCTGGAGGGATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG > 2:138000/1‑143 GCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGG > 1:325630/1‑143 CTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGACGGTGTGCGGTGAGGCATGCTGGAGGGATCAGCAGTGCGAATGCTGACATAAGTACCGAGAAAGCGGGg > 2:784234/1‑142 ggAGCTGCGGCAGCGACGCTTATGCGTTGTGGGGGAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTT < 2:911770/141‑1 aggTGCGGCGGGGACGCTTTGGCGTTGTTGGGTAGGGGGGCGTTCTGTAAGCCTGCGAAGGTGTGCTGGGAGGAATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTTAT < 2:946088/140‑1 AGCTGCTGCAGCGACGCTTATGGGTTGTTGGGTGGGGGGGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGTCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTTAT < 2:105238/143‑1 GTTGGTGCGTGGGGGAGCGTTCTCTACGCCTGCGAAAGAGTGCTGTGGGGGATGCGGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCA < 2:324494/143‑1 gaccgcGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGG < 1:134684/137‑1 AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATGCCTCCAGCACGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGT < 1:35174/143‑1 AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGT < 1:919567/143‑1 AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGT < 1:797544/143‑1 GGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATGCGCACTTATGATACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACAGAGTGTCGCTGCCGCAGCTTCGGTGCAT > 1:97652/1‑143 ACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAagcggg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3944837‑3944978‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCACAGGCTTACAGAACGCTCCCCTACCCAACAACACATAGTGTCGCTGCCGCAGCTTCGGTGCAT < NC_000913/4038811‑4038665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |